Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g03854 Brassica carinata HOM05D006424 ORTHO05D007945 1.1e-155 553.1 267 100.0
C03p47890 Brassica napus HOM05D006424 ORTHO05D007945 1.4e-150 536.2 270 96.7
A03p39490 Brassica napus HOM05D006424 ORTHO05D007945 4.7e-149 531.2 270 95.6
BraA03t13099Z Brassica rapa HOM05D006424 ORTHO05D007945 5.7e-147 524.2 270 94.8
BolC3t17067H Brassica oleracea HOM05D006424 ORTHO05D007945 9.4e-142 506.9 289 86.5
CARHR090930 Cardamine hirsuta HOM05D006424 ORTHO05D007945 6.7e-140 500.7 271 90.4
A05p33570 Brassica napus HOM05D006424 ORTHO05D007945 2.0e-139 499.2 270 90.0
BcaB06g25691 Brassica carinata HOM05D006424 ORTHO05D007945 3.3e-139 498.4 270 90.0
BolC5t33801H Brassica oleracea HOM05D006424 ORTHO05D007945 4.4e-139 498.0 270 89.6
BcaC05g28929 Brassica carinata HOM05D006424 ORTHO05D007945 1.7e-138 496.1 270 89.3
C05p50560 Brassica napus HOM05D006424 ORTHO05D007945 1.7e-138 496.1 270 89.3
Carub.0003s1558 Capsella rubella HOM05D006424 ORTHO05D007945 4.8e-138 494.6 270 88.9
AT3G15840 Arabidopsis thaliana HOM05D006424 ORTHO05D007945 1.8e-137 492.7 270 88.1
AL3G28500 Arabidopsis lyrata HOM05D006424 ORTHO05D007945 5.3e-137 491.1 270 88.5
Sp3g14150 Schrenkiella parvula HOM05D006424 ORTHO05D007945 7.0e-137 490.7 269 88.1
BraA05t22180Z Brassica rapa HOM05D006424 ORTHO05D007945 2.0e-136 489.2 270 88.9
Thhalv10022443m.g Eutrema salsugineum HOM05D006424 ORTHO05D007945 2.0e-136 489.2 270 88.9
Aa31LG8G3030 Aethionema arabicum HOM05D006424 ORTHO05D007945 1.5e-131 473.0 270 83.3
THA.LOC104810510 Tarenaya hassleriana HOM05D006424 ORTHO05D007945 2.9e-114 415.6 275 72.0
COL.COLO4_11949 Corchorus olitorius HOM05D006424 ORTHO05D007945 9.2e-105 384.0 273 68.1
Duzib192G0907 Durio zibethinus HOM05D006424 ORTHO05D007945 2.0e-104 382.9 269 67.3
MELO3C023426.2 Cucumis melo HOM05D006424 ORTHO05D007945 1.0e-103 380.6 224 76.8
Thecc.06G024200 Theobroma cacao HOM05D006424 ORTHO05D007945 1.7e-103 379.8 273 66.7
Cpa.g.sc10.267 Carica papaya HOM05D006424 ORTHO05D007945 3.0e-103 379.0 282 66.0
Sed0012965 Sechium edule HOM05D006424 ORTHO05D007945 3.0e-103 379.0 219 77.2
Eucgr.F03876 Eucalyptus grandis HOM05D006424 ORTHO05D007945 8.6e-103 377.5 266 67.7
ClCG09G002940 Citrullus lanatus HOM05D006424 ORTHO05D007945 1.5e-102 376.7 224 75.9
Lalb_Chr04g0262371 Lupinus albus HOM05D006424 ORTHO05D007945 1.5e-102 376.7 270 67.4
Manes.11G056800 Manihot esculenta HOM05D006424 ORTHO05D007945 1.5e-102 376.7 252 69.4
CsaV3_7G032330 Cucumis sativus L. HOM05D006424 ORTHO05D007945 1.9e-102 376.3 224 74.6
Gohir.A06G185600 Gossypium hirsutum HOM05D006424 ORTHO05D007945 9.5e-102 374.0 276 65.9
Gohir.D06G192200 Gossypium hirsutum HOM05D006424 ORTHO05D007945 1.2e-101 373.6 275 66.2
QL05p029818 Quercus lobata HOM05D006424 ORTHO05D007945 1.6e-101 373.2 237 71.7
Gorai.010G225400 Gossypium raimondii HOM05D006424 ORTHO05D007945 2.1e-101 372.9 271 66.8
PGR102G1391 Punica granatum HOM05D006424 ORTHO05D007945 2.8e-101 372.5 257 67.7
Nn2g12084 Nelumbo nucifera HOM05D006424 ORTHO05D007945 3.6e-101 372.1 269 67.7
GSVIVG01017340001 Vitis vinifera HOM05D006424 ORTHO05D007945 2.3e-100 369.4 220 75.5
Phvul.010G156300 Phaseolus vulgaris HOM05D006424 ORTHO05D007945 3.1e-100 369.0 276 62.3
PGSC0003DMG402028626 Solanum tuberosum HOM05D006424 ORTHO05D007945 5.2e-100 368.2 280 65.4
Lj3g0018478 Lotus japonicus HOM05D006424 ORTHO05D007945 6.8e-100 367.9 274 64.6
Manes.04G112700 Manihot esculenta HOM05D006424 ORTHO05D007945 6.8e-100 367.9 246 67.5
VMungo0331G1912 Vigna mungo HOM05D006424 ORTHO05D007945 6.8e-100 367.9 276 62.3
TWI12G0141 Tripterygium wilfordii HOM05D006424 ORTHO05D007945 8.9e-100 367.5 211 77.7
Hma1.2p1_0042F.1_g025600 Hydrangea macrophylla HOM05D006424 ORTHO05D007945 1.2e-99 367.1 257 67.3
Potri.001G204300 Populus trichocarpa HOM05D006424 ORTHO05D007945 1.5e-99 366.7 254 67.3
CSS0015595 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 2.0e-99 366.3 199 78.9
Actinidia08796 Actinidia chinensis HOM05D006424 ORTHO05D007945 3.4e-99 365.5 286 61.5
Lj9A500T81 Lonicera japonica HOM05D006424 ORTHO05D007945 3.4e-99 365.5 244 69.3
Actinidia15982 Actinidia chinensis HOM05D006424 ORTHO05D007945 4.4e-99 365.2 210 76.2
AUR62016338 Chenopodium quinoa HOM05D006424 ORTHO05D007945 4.4e-99 365.2 283 64.7
MD17G1212100 Malus domestica HOM05D006424 ORTHO05D007945 5.8e-99 364.8 280 64.6
Nitab4.5_0009497g0010 Nicotiana tabacum HOM05D006424 ORTHO05D007945 5.8e-99 364.8 279 62.7
Rhsim12G0191200 Rhododendron simsii HOM05D006424 ORTHO05D007945 5.8e-99 364.8 268 63.8
Prupe.3G087300 Prunus persica HOM05D006424 ORTHO05D007945 7.5e-99 364.4 283 63.3
Medtr4g010140 Medicago truncatula HOM05D006424 ORTHO05D007945 9.8e-99 364.0 280 63.9
RcHm_v2.0_Chr2g0135411 Rosa chinensis HOM05D006424 ORTHO05D007945 9.8e-99 364.0 279 65.2
Sabra01G0157400 Salix brachista HOM05D006424 ORTHO05D007945 9.8e-99 364.0 212 75.0
AUR62011520 Chenopodium quinoa HOM05D006424 ORTHO05D007945 2.9e-98 362.5 282 64.2
Cc04_g04390 Coffea canephora HOM05D006424 ORTHO05D007945 2.9e-98 362.5 242 67.8
FAN05G3690 Fragaria x ananassa HOM05D006424 ORTHO05D007945 4.9e-98 361.7 278 62.9
Peaxi162Scf00034g01413 Petunia axillaris HOM05D006424 ORTHO05D007945 1.1e-97 360.5 221 74.7
Glyma.08G213000 Glycine max HOM05D006424 ORTHO05D007945 1.4e-97 360.1 277 63.9
Oeu039429.1 Olea europaea HOM05D006424 ORTHO05D007945 2.4e-97 359.4 213 75.1
Atru.chr1.2950 Acer truncatum HOM05D006424 ORTHO05D007945 3.2e-97 359.0 268 63.8
Cfa001961 Carpinus fangiana HOM05D006424 ORTHO05D007945 3.2e-97 359.0 246 69.1
HanXRQChr04g0097881 Helianthus annuus HOM05D006424 ORTHO05D007945 3.2e-97 359.0 243 68.3
TAR383G1051 Trochodendron aralioides HOM05D006424 ORTHO05D007945 3.2e-97 359.0 277 63.5
FAN02G1519 Fragaria x ananassa HOM05D006424 ORTHO05D007945 5.4e-97 358.2 285 61.1
Nn8g39504 Nelumbo nucifera HOM05D006424 ORTHO05D007945 5.4e-97 358.2 279 63.1
Solyc12g042770.3 Solanum lycopersicum HOM05D006424 ORTHO05D007945 5.4e-97 358.2 279 63.8
CANSAT56G3050 Cannabis sativa HOM05D006424 ORTHO05D007945 7.1e-97 357.8 281 62.3
Ca_20445_v3 Cicer arietinum L. HOM05D006424 ORTHO05D007945 7.1e-97 357.8 282 62.4
Sopen12g021950 Solanum pennellii HOM05D006424 ORTHO05D007945 7.1e-97 357.8 279 63.1
CSS0035863 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 1.6e-96 356.7 270 63.7
FAN14G0356 Fragaria x ananassa HOM05D006424 ORTHO05D007945 2.1e-96 356.3 261 65.1
Glyma.07G029900 Glycine max HOM05D006424 ORTHO05D007945 3.5e-96 355.5 270 61.9
MSTRG.22746 Avicennia marina HOM05D006424 ORTHO05D007945 1.0e-95 354.0 268 64.2
DCAR_021344 Daucus carota HOM05D006424 ORTHO05D007945 1.7e-95 353.2 282 61.0
CAN.G47.13 Capsicum annuum HOM05D006424 ORTHO05D007945 2.3e-95 352.8 206 75.7
Haze_16559 Corylus avellana HOM05D006424 ORTHO05D007945 3.9e-95 352.1 275 62.5
Ah.01g020600 Amaranthus hybridus HOM05D006424 ORTHO05D007945 6.6e-95 351.3 206 76.7
MBI04_g29330_MAGBIO Magnolia biondii HOM05D006424 ORTHO05D007945 8.6e-95 350.9 260 63.1
CiPaw.02G157300 Carya illinoinensis HOM05D006424 ORTHO05D007945 4.3e-94 348.6 275 61.1
Ciclev10026222m.g Citrus clementina HOM05D006424 ORTHO05D007945 4.3e-94 348.6 250 63.6
Migut.I00764 Erythranthe guttata HOM05D006424 ORTHO05D007945 4.3e-94 348.6 279 62.7
unitig_27.g24949 Utricularia gibba HOM05D006424 ORTHO05D007945 5.6e-94 348.2 271 61.3
vmacro16897 Vaccinium macrocarpon HOM05D006424 ORTHO05D007945 5.6e-94 348.2 201 74.6
ATR0322G065 Amborella trichopoda HOM05D006424 ORTHO05D007945 6.2e-93 344.7 249 62.2
TPR.G38617 Trifolium pratense HOM05D001630 ORTHO05D007945 6.2e-93 344.7 213 72.3
FvH4_6g29710 Fragaria vesca HOM05D006424 ORTHO05D007945 1.4e-92 343.6 195 77.4
CiPaw.01G248200 Carya illinoinensis HOM05D006424 ORTHO05D007945 1.8e-92 343.2 249 65.5
Lsat_1_v5_gn_1_34401 Lactuca sativa HOM05D006424 ORTHO05D007945 1.2e-91 340.5 204 71.6
CDE07G1654 Ceratophyllum demersum HOM05D006424 ORTHO05D007945 1.5e-91 340.1 253 64.8
ECA247G2617 Erigeron canadensis HOM05D006424 ORTHO05D007945 1.5e-91 340.1 270 59.3
arahy.Tifrunner.gnm1.ann1.92ZGJC Arachis hypogaea HOM05D006424 ORTHO05D007945 4.4e-91 338.6 236 65.7
PSO210G3245 Papaver somniferum HOM05D006424 ORTHO05D007945 5.8e-91 338.2 280 59.6
PSO210G5365 Papaver somniferum HOM05D006424 ORTHO05D007945 1.3e-90 337.0 280 58.2
Aqoxy7G03662 Aquilegia oxysepala HOM05D006424 ORTHO05D007945 2.9e-90 335.9 206 70.9
Nitab4.5_0003157g0020 Nicotiana tabacum HOM05D006424 ORTHO05D007945 5.4e-89 331.6 279 60.6
Os03g0586500 Oryza sativa ssp. japonica HOM05D006424 ORTHO05D007945 1.7e-87 326.6 219 67.1
FAN09G3401 Fragaria x ananassa HOM05D006424 ORTHO05D007945 2.5e-86 322.8 232 65.9
Zm00001eb049190 Zea mays HOM05D006424 ORTHO05D007945 2.4e-84 316.2 206 69.4
Zm00001eb219530 Zea mays HOM05D006424 ORTHO05D007945 1.9e-81 306.6 227 63.0
Mapoly0024s0088 Marchantia polymorpha HOM05D006424 ORTHO05D007945 6.9e-76 288.1 264 51.5
SalBow2G1302 Salvia bowleyana HOM05D006424 ORTHO05D007945 4.2e-73 278.9 280 53.2
Pp3c22_2660 Physcomitrium patens HOM05D006424 ORTHO05D007945 5.6e-70 268.5 215 54.4
Pp3c9_11540 Physcomitrium patens HOM05D006424 ORTHO05D007945 9.6e-70 267.7 197 57.4
Thecc.06G024600 Theobroma cacao HOM05D006424 ORTHO05D007945 3.4e-67 259.2 206 60.7
Sed0007474 Sechium edule HOM05D006424 ORTHO05D007945 4.5e-67 258.8 172 67.4
Dinv38123 Davidia involucrata HOM05D006424 ORTHO05D007945 9.9e-67 257.7 210 61.0
AagrBONN_evm.TU.Sc2ySwM_344.5484 Anthoceros agrestis HOM05D006424 ORTHO05D007945 1.3e-66 257.3 266 47.7
CBR_g38381 Chara braunii HOM05D006424 ORTHO05D007945 1.3e-66 257.3 200 55.0
SMO331G0083 Selaginella moellendorffii HOM05D006424 ORTHO05D007945 1.9e-65 253.4 198 55.6
Thecc.K0004600 Theobroma cacao HOM05D006424 ORTHO05D007945 7.1e-65 251.5 147 77.6
Pp3c15_11500 Physcomitrium patens HOM05D006424 ORTHO05D007945 9.3e-57 224.6 180 56.1
Hund06560 Selenicereus undatus HOM05D006424 ORTHO05D007945 6.3e-53 211.8 238 48.7
SEGI_16074 Sequoiadendron giganteum HOM05D006424 ORTHO05D007945 3.1e-52 209.5 143 59.4
arahy.Tifrunner.gnm1.ann1.7R86JN Arachis hypogaea HOM05D006424 ORTHO05D007945 6.1e-48 195.3 277 44.0
Psat7g257120 Pisum sativum HOM05D006424 ORTHO05D007945 2.6e-43 179.9 171 55.6
EL10Ac9g21901 Beta vulgaris HOM05D006424 ORTHO05D007945 2.5e-41 173.3 163 56.4
QL05p029868 Quercus lobata HOM05D006424 ORTHO05D007945 1.3e-29 134.4 118 56.8
QL05p029832 Quercus lobata HOM05D006424 ORTHO05D007945 2.8e-21 106.7 74 63.5
Oeu000425.1 Olea europaea HOM05D006424 ORTHO05D007945 1.0e-18 98.2 132 41.7
arahy.Tifrunner.gnm1.ann1.ZYH6JG Arachis hypogaea HOM05D006424 ORTHO05D007945 1.8e-15 87.4 55 70.9
arahy.Tifrunner.gnm1.ann1.YP381G Arachis hypogaea HOM05D006424 ORTHO05D007945 3.5e-11 73.2 37 81.1


User provided reference genes

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