Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g03839 Brassica carinata HOM05D008709 ORTHO05D011440 2.8e-70 268.5 134 100.0
BcaB04g18876 Brassica carinata HOM05D008709 ORTHO05D011440 1.3e-46 189.9 124 83.1
BolC3t17088H Brassica oleracea HOM05D008709 ORTHO05D011440 1.4e-40 169.9 85 100.0
BraA03t13117Z Brassica rapa HOM05D008709 ORTHO05D011440 5.0e-35 151.4 87 90.8
A03p39690 Brassica napus HOM05D008709 ORTHO05D011440 8.6e-35 150.6 87 89.7
BcaC01g01470 Brassica carinata HOM05D008709 ORTHO05D011440 2.4e-29 132.5 127 60.6
C03p92330 Brassica napus HOM05D008709 ORTHO05D011440 2.4e-29 132.5 127 60.6
BolC3t21545H Brassica oleracea HOM05D008709 ORTHO05D011440 3.2e-29 132.1 127 60.6
C03p48070 Brassica napus HOM05D008709 ORTHO05D011440 1.9e-26 122.9 62 98.4
BolC3t17089H Brassica oleracea HOM05D008709 ORTHO05D011440 1.5e-23 113.2 129 54.3
BcaC01g03838 Brassica carinata HOM05D008709 ORTHO05D011440 2.0e-23 112.8 122 55.7
C03p48080 Brassica napus HOM05D008709 ORTHO05D011440 2.0e-23 112.8 122 55.7
BraA03t13118Z Brassica rapa HOM05D008709 ORTHO05D011440 2.2e-22 109.4 129 53.5
AT2G16005 Arabidopsis thaliana HOM05D008709 ORTHO05D011440 1.4e-21 106.7 128 50.8
BcaB04g18887 Brassica carinata HOM05D008709 ORTHO05D011440 1.7e-19 99.8 123 53.7
BraA03t13114Z Brassica rapa HOM05D008709 ORTHO05D011440 1.5e-18 96.7 140 46.4
CARHR091170 Cardamine hirsuta HOM05D008709 ORTHO05D011440 4.3e-18 95.1 121 47.9
BcaC01g03835 Brassica carinata HOM05D001353 ORTHO05D005187 7.3e-18 94.4 122 50.0
C03p48130 Brassica napus HOM05D008709 ORTHO05D011440 7.3e-18 94.4 122 50.0
BolC3t17093H Brassica oleracea HOM05D008709 ORTHO05D011440 7.3e-18 94.4 122 50.0
CARHR091160 Cardamine hirsuta HOM05D008709 ORTHO05D011440 3.6e-17 92.0 107 52.3
BcaB04g18874 Brassica carinata HOM05D008709 ORTHO05D011440 3.1e-16 89.0 133 45.9
BcaC01g03840 Brassica carinata HOM05D008709 ORTHO05D021804 6.8e-16 87.8 124 48.4
BraA03t13112Z Brassica rapa HOM05D008709 ORTHO05D011440 2.0e-15 86.3 125 43.2
A01p38070 Brassica napus HOM05D008709 ORTHO05D024458 7.6e-15 84.3 139 43.9
BcaC01g03841 Brassica carinata HOM05D008709 ORTHO05D011440 1.3e-14 83.6 144 43.1
BcaB04g18875 Brassica carinata HOM05D008709 ORTHO05D021804 2.2e-14 82.8 124 47.6
BcaC09g48582 Brassica carinata HOM05D008709 ORTHO05D024458 2.2e-14 82.8 132 47.0
A03p39650 Brassica napus HOM05D008709 ORTHO05D011440 2.2e-14 82.8 127 42.5
A03p39670 Brassica napus HOM05D008709 ORTHO05D011440 2.4e-13 79.3 94 52.1
BcaB04g18877 Brassica carinata HOM05D008709 ORTHO05D011440 1.0e-11 73.9 85 54.1
BcaB04g18885 Brassica carinata HOM05D008709 ORTHO05D011440 4.3e-10 68.6 103 44.7
C03p48140 Brassica napus HOM05D008709 ORTHO05D011440 3.6e-09 65.5 81 54.3
BolC3t17085H Brassica oleracea HOM05D008709 ORTHO05D011440 4.7e-09 65.1 117 40.2
CARHR091180 Cardamine hirsuta HOM05D008709 ORTHO05D011440 1.4e-08 63.5 123 43.1
Thhalv10009560m.g Eutrema salsugineum HOM05D008709 ORTHO05D011440 2.4e-08 62.8 83 42.2
A03p39680 Brassica napus HOM05D008709 ORTHO05D021804 1.5e-07 60.1 110 42.7
C03p48060 Brassica napus HOM05D008709 ORTHO05D021804 4.4e-07 58.5 110 40.0
BolC3t17087H Brassica oleracea HOM05D008709 ORTHO05D021804 4.4e-07 58.5 110 40.0
C01p25000 Brassica napus HOM05D014281 ORTHO05D027372 1.7e-06 56.6 130 36.2
BolC1t02444H Brassica oleracea HOM05D014281 ORTHO05D027372 1.7e-06 56.6 130 36.2
BraA03t13116Z Brassica rapa HOM05D008709 ORTHO05D021804 1.7e-06 56.6 110 40.9
BraA09t38151Z Brassica rapa HOM05D014281 ORTHO05D027372 1.7e-06 56.6 116 40.5


User provided reference genes

Program Settings