Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g03777 Brassica carinata HOM05D008745 ORTHO05D010941 1.5e-98 362.8 188 100.0
C03p48680 Brassica napus HOM05D008745 ORTHO05D010941 2.9e-97 358.6 188 99.5
A03p40110 Brassica napus HOM05D008745 ORTHO05D010941 5.0e-97 357.8 188 98.4
BraA03t13161Z Brassica rapa HOM05D008745 ORTHO05D010941 7.9e-95 350.5 188 96.3
BolC3t17147H Brassica oleracea HOM05D008745 ORTHO05D010941 1.9e-88 329.3 190 91.6
BcaB04g18935 Brassica carinata HOM05D008745 ORTHO05D010941 1.5e-80 303.1 190 84.2
Sp3g15410 Schrenkiella parvula HOM05D008745 ORTHO05D010941 1.3e-49 200.3 189 61.4
CARHR092500 Cardamine hirsuta HOM05D008745 ORTHO05D010941 1.9e-48 196.4 189 59.8
BcaB06g25813 Brassica carinata HOM05D008745 ORTHO05D010941 1.8e-46 189.9 189 58.2
BcaC05g28818 Brassica carinata HOM05D008745 ORTHO05D010941 9.2e-43 177.6 189 56.1
C05p49220 Brassica napus HOM05D008745 ORTHO05D010941 9.2e-43 177.6 189 56.1
BolC5t33663H Brassica oleracea HOM05D008745 ORTHO05D010941 2.0e-42 176.4 189 55.6
A05p32570 Brassica napus HOM05D008745 ORTHO05D010941 4.6e-42 175.3 189 55.6
AL3G30260 Arabidopsis lyrata HOM05D008745 ORTHO05D010941 1.0e-41 174.1 190 54.2
BraA05t22081Z Brassica rapa HOM05D008745 ORTHO05D010941 1.7e-41 173.3 189 55.0
Thhalv10021601m.g Eutrema salsugineum HOM05D008745 ORTHO05D010941 5.0e-41 171.8 189 54.5
AT3G17230 Arabidopsis thaliana HOM05D008745 ORTHO05D010941 4.3e-40 168.7 189 52.4
AT3G17225 Arabidopsis thaliana HOM05D008745 ORTHO05D010941 5.6e-40 168.3 190 53.7
AT3G17227 Arabidopsis thaliana HOM05D008745 ORTHO05D010941 8.1e-39 164.5 189 51.3
Thhalv10022084m.g Eutrema salsugineum HOM05D008745 ORTHO05D010941 4.0e-38 162.2 173 56.6
Sp3g15450 Schrenkiella parvula HOM05D008745 ORTHO05D010941 5.2e-38 161.8 189 52.4
Carub.0002s1162 Capsella rubella HOM05D008745 ORTHO05D010941 1.7e-33 146.7 187 48.7
Carub.0002s0897 Capsella rubella HOM05D008745 ORTHO05D010941 3.9e-33 145.6 188 47.9
Carub.0003s2924 Capsella rubella HOM05D008745 ORTHO05D010941 5.1e-33 145.2 187 46.0
Carub.0006s2723 Capsella rubella HOM05D008745 ORTHO05D010941 2.5e-32 142.9 187 47.6
Carub.0006s2544 Capsella rubella HOM05D008745 ORTHO05D010941 4.3e-32 142.1 191 47.6
Sp3g15440 Schrenkiella parvula HOM05D008745 ORTHO05D010941 4.3e-32 142.1 191 48.7
BcaB06g25814 Brassica carinata HOM05D008745 ORTHO05D010941 1.1e-30 137.5 185 46.5
C05p49180 Brassica napus HOM05D008745 ORTHO05D010941 6.8e-30 134.8 188 46.8
BraA05t22077Z Brassica rapa HOM05D008745 ORTHO05D010941 6.8e-30 134.8 187 45.5
A05p32510 Brassica napus HOM05D008745 ORTHO05D010941 1.5e-29 133.7 187 44.9
AL3G30270 Arabidopsis lyrata HOM05D008745 ORTHO05D010941 4.4e-29 132.1 188 44.1
Sp3g04630 Schrenkiella parvula HOM05D008745 ORTHO05D010941 2.2e-28 129.8 188 39.9
BcaC05g28814 Brassica carinata HOM05D008745 ORTHO05D010941 5.1e-25 118.6 179 44.1
BolC1t05672H Brassica oleracea HOM05D008745 ORTHO05D010941 5.1e-25 118.6 188 38.8
BolC5t33659H Brassica oleracea HOM05D008745 ORTHO05D010941 8.6e-25 117.9 179 44.1
BraA01t04492Z Brassica rapa HOM05D008745 ORTHO05D010941 3.6e-23 112.5 181 38.7
Thhalv10022010m.g Eutrema salsugineum HOM05D008745 ORTHO05D010941 9.0e-22 107.8 189 36.5
AL3G16450 Arabidopsis lyrata HOM05D008745 ORTHO05D010941 5.8e-21 105.1 154 40.9
BcaC09g47846 Brassica carinata HOM05D008745 ORTHO05D010941 9.9e-21 104.4 181 38.1
AT2G15345 Arabidopsis thaliana HOM05D008745 ORTHO05D010941 2.0e-13 80.1 117 43.6
AL3G47110 Arabidopsis lyrata HOM05D008745 ORTHO05D010941 2.7e-10 69.7 90 50.0


User provided reference genes

Program Settings