Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g03724 Brassica carinata HOM05D003871 ORTHO05D039068 1.2e-46 189.5 97 100.0
BcaC01g03725 Brassica carinata HOM05D003871 ORTHO05D004621 1.2e-46 189.5 97 100.0
C03p49270 Brassica napus HOM05D003871 ORTHO05D004621 7.6e-33 143.7 76 97.4
BolC3t17208H Brassica oleracea HOM05D003843 ORTHO05D004621 2.4e-26 122.1 74 85.1
AL8G39820 Arabidopsis lyrata HOM05D003871 ORTHO05D004621 8.7e-21 103.6 88 60.2
MBI12_g36508_MAGBIO Magnolia biondii HOM05D003871 ORTHO05D004621 2.6e-17 92.0 97 49.5
CDE02G2895 Ceratophyllum demersum HOM05D003871 ORTHO05D004621 3.4e-17 91.7 97 48.5
Nn1g01381 Nelumbo nucifera HOM05D003871 ORTHO05D004621 5.8e-17 90.9 97 49.5
AagrBONN_evm.TU.Sc2ySwM_362.2141 Anthoceros agrestis HOM05D003871 ORTHO05D004621 7.6e-17 90.5 97 49.5
TAR374G1595 Trochodendron aralioides HOM05D003871 ORTHO05D004621 1.0e-16 90.1 97 48.5
CARHR171420 Cardamine hirsuta HOM05D003871 ORTHO05D004621 1.3e-16 89.7 97 48.5
Pp3c11_20980 Physcomitrium patens HOM05D003871 ORTHO05D004621 1.3e-16 89.7 85 52.9
Mapoly0035s0029 Marchantia polymorpha HOM05D003871 ORTHO05D004621 1.7e-16 89.4 97 48.5
CDE11G1114 Ceratophyllum demersum HOM05D003871 ORTHO05D004621 2.9e-16 88.6 85 49.4
Gohir.A12G104100 Gossypium hirsutum HOM05D003871 ORTHO05D004621 4.9e-16 87.8 97 49.5
Gohir.D12G107500 Gossypium hirsutum HOM05D003871 ORTHO05D004621 4.9e-16 87.8 97 49.5
Gorai.008G117100 Gossypium raimondii HOM05D003871 ORTHO05D004621 4.9e-16 87.8 97 49.5
Duzib138G1891 Durio zibethinus HOM05D003871 ORTHO05D004621 8.4e-16 87.0 97 48.5
Cc02_g37360 Coffea canephora HOM05D003871 ORTHO05D004621 1.1e-15 86.7 97 47.4
Gohir.A11G085600 Gossypium hirsutum HOM05D003871 ORTHO05D004621 1.1e-15 86.7 97 47.4
Phvul.010G090500 Phaseolus vulgaris HOM05D003871 ORTHO05D004621 1.1e-15 86.7 97 47.4
Rhsim07G0020500 Rhododendron simsii HOM05D003871 ORTHO05D004621 1.1e-15 86.7 97 46.4
SEGI_36445 Sequoiadendron giganteum HOM05D003871 ORTHO05D004621 1.1e-15 86.7 85 51.8
Aa31LG10G15210 Aethionema arabicum HOM05D003871 ORTHO05D004621 1.4e-15 86.3 97 46.4
TWI23G1177 Tripterygium wilfordii HOM05D003871 ORTHO05D004621 1.4e-15 86.3 97 46.4
vmacro13332 Vaccinium macrocarpon HOM05D003871 ORTHO05D004621 1.4e-15 86.3 97 46.4
vmacro20965 Vaccinium macrocarpon HOM05D003871 ORTHO05D004621 1.4e-15 86.3 97 45.4
Aqoxy7G00418 Aquilegia oxysepala HOM05D003871 ORTHO05D004621 1.9e-15 85.9 97 46.4
AT3G61140 Arabidopsis thaliana HOM05D003871 ORTHO05D004621 1.9e-15 85.9 97 46.4
arahy.Tifrunner.gnm1.ann1.I68A9W Arachis hypogaea HOM05D003871 ORTHO05D004621 1.9e-15 85.9 97 45.4
arahy.Tifrunner.gnm1.ann1.WVA4TF Arachis hypogaea HOM05D003871 ORTHO05D004621 1.9e-15 85.9 97 45.4
CAN.G170.26 Capsicum annuum HOM05D003871 ORTHO05D004621 1.9e-15 85.9 97 47.4
COL.COLO4_12614 Corchorus olitorius HOM05D003871 ORTHO05D004621 1.9e-15 85.9 97 47.4
Eucgr.E00211 Eucalyptus grandis HOM05D003871 ORTHO05D004621 1.9e-15 85.9 97 47.4
Lalb_Chr10g0097451 Lupinus albus HOM05D003871 ORTHO05D004621 1.9e-15 85.9 97 47.4
Nitab4.5_0004973g0020 Nicotiana tabacum HOM05D003871 ORTHO05D004621 1.9e-15 85.9 97 47.4
Peaxi162Scf00021g00920 Petunia axillaris HOM05D003871 ORTHO05D004621 1.9e-15 85.9 97 47.4
Sopen01g037420 Solanum pennellii HOM05D003871 ORTHO05D004621 1.9e-15 85.9 97 47.4
PGSC0003DMG400027768 Solanum tuberosum HOM05D003871 ORTHO05D004621 1.9e-15 85.9 97 47.4
HPP92_007366 Vanilla planifolia HOM05D003871 ORTHO05D004621 1.9e-15 85.9 85 47.1
AL5G43380 Arabidopsis lyrata HOM05D003871 ORTHO05D004621 2.5e-15 85.5 97 46.4
Carub.0005s2779 Capsella rubella HOM05D003871 ORTHO05D004621 2.5e-15 85.5 97 46.4
Haze_15212 Corylus avellana HOM05D003871 ORTHO05D004621 2.5e-15 85.5 97 46.4
Gohir.D11G089800 Gossypium hirsutum HOM05D003871 ORTHO05D004621 2.5e-15 85.5 97 46.4
PGR042G2189 Punica granatum HOM05D003871 ORTHO05D004621 2.5e-15 85.5 97 46.4
GSVIVG01027510001 Vitis vinifera HOM05D003871 ORTHO05D004621 2.5e-15 85.5 97 46.4
Dinv43765 Davidia involucrata HOM05D003871 ORTHO05D004621 3.2e-15 85.1 97 46.4
arahy.Tifrunner.gnm1.ann1.6U8ZH2 Arachis hypogaea HOM05D003871 ORTHO05D004621 4.2e-15 84.7 97 45.4
arahy.Tifrunner.gnm1.ann1.AB99XC Arachis hypogaea HOM05D003871 ORTHO05D004621 4.2e-15 84.7 97 45.4
Glyma.07G077100 Glycine max HOM05D003871 ORTHO05D004621 4.2e-15 84.7 97 46.4
Manes.05G039500 Manihot esculenta HOM05D003871 ORTHO05D004621 4.2e-15 84.7 97 46.4
Solyc01g091650.3 Solanum lycopersicum HOM05D003871 ORTHO05D004621 4.2e-15 84.7 97 46.4
THA.LOC104802015 Tarenaya hassleriana HOM05D003871 ORTHO05D004621 4.2e-15 84.7 97 47.4
VMungo0331G1218 Vigna mungo HOM05D003871 ORTHO05D004621 4.2e-15 84.7 97 46.4
Hma1.2p1_0033F.1_g020520 Hydrangea macrophylla HOM05D003871 ORTHO05D004621 5.5e-15 84.3 97 46.4
Medtr7g076160 Medicago truncatula HOM05D003871 ORTHO05D004621 5.5e-15 84.3 98 45.9
Nitab4.5_0005109g0020 Nicotiana tabacum HOM05D003871 ORTHO05D004621 5.5e-15 84.3 97 46.4
TPR.G17571 Trifolium pratense HOM05D003871 ORTHO05D004621 5.5e-15 84.3 97 46.4
Actinidia32928 Actinidia chinensis HOM05D003871 ORTHO05D004621 7.1e-15 84.0 97 45.4
Actinidia38296 Actinidia chinensis HOM05D003871 ORTHO05D004621 7.1e-15 84.0 97 45.4
BcaB02g07388 Brassica carinata HOM05D003871 ORTHO05D004621 7.1e-15 84.0 97 45.4
BcaC08g45104 Brassica carinata HOM05D003871 ORTHO05D004621 7.1e-15 84.0 97 45.4
A07p25320 Brassica napus HOM05D003871 ORTHO05D004621 7.1e-15 84.0 97 45.4
C06p27130 Brassica napus HOM05D003871 ORTHO05D004621 7.1e-15 84.0 97 45.4
BolC6t37886H Brassica oleracea HOM05D003871 ORTHO05D004621 7.1e-15 84.0 97 45.4
CSS0019666 Camellia sinensis var. sinensis HOM05D003871 ORTHO05D004621 7.1e-15 84.0 97 45.4
CSS0031493 Camellia sinensis var. sinensis HOM05D003871 ORTHO05D004621 7.1e-15 84.0 97 45.4
CSS0038711 Camellia sinensis var. sinensis HOM05D003871 ORTHO05D004621 7.1e-15 84.0 97 45.4
CiPaw.02G026000 Carya illinoinensis HOM05D003871 ORTHO05D004621 7.1e-15 84.0 97 45.4
CiPaw.02G026100 Carya illinoinensis HOM05D003871 ORTHO05D004621 7.1e-15 84.0 97 45.4
Ciclev10020177m.g Citrus clementina HOM05D003871 ORTHO05D004621 7.1e-15 84.0 97 45.4
Dinv16518 Davidia involucrata HOM05D003871 ORTHO05D004621 7.1e-15 84.0 97 45.4
Thhalv10005978m.g Eutrema salsugineum HOM05D003871 ORTHO05D004621 7.1e-15 84.0 97 45.4
Glyma.03G016800 Glycine max HOM05D003871 ORTHO05D004621 7.1e-15 84.0 97 46.4
Lj7C518G12 Lonicera japonica HOM05D003871 ORTHO05D004621 7.1e-15 84.0 97 45.4
Os03g0116500 Oryza sativa ssp. japonica HOM05D003871 ORTHO05D004621 7.1e-15 84.0 97 46.4
Sp5g02240 Schrenkiella parvula HOM05D003871 ORTHO05D004621 7.1e-15 84.0 97 45.4
Ca_07858_v3 Cicer arietinum L. HOM05D003871 ORTHO05D004621 9.3e-15 83.6 97 45.4
PSO478G4452 Papaver somniferum HOM05D003871 ORTHO05D004621 9.3e-15 83.6 85 48.2
PSO782G3116 Papaver somniferum HOM05D003871 ORTHO05D004621 9.3e-15 83.6 85 48.2
CSS0039371 Camellia sinensis var. sinensis HOM05D003871 ORTHO05D004621 1.2e-14 83.2 97 45.4
Cpa.g.sc18.218 Carica papaya HOM05D003871 ORTHO05D004621 1.2e-14 83.2 97 45.4
Ca_23740_v3 Cicer arietinum L. HOM05D003871 ORTHO05D004621 1.2e-14 83.2 97 46.4
Ca_23745_v3 Cicer arietinum L. HOM05D003871 ORTHO05D004621 1.2e-14 83.2 97 46.4
Duzib133G0086 Durio zibethinus HOM05D003871 ORTHO05D004621 1.2e-14 83.2 97 46.4
MD01G1050400 Malus domestica HOM05D003871 ORTHO05D004621 1.2e-14 83.2 97 45.4
RcHm_v2.0_Chr1g0352651 Rosa chinensis HOM05D003871 ORTHO05D004621 1.2e-14 83.2 97 44.3
SMO365G0068 Selaginella moellendorffii HOM05D003871 ORTHO05D004621 1.2e-14 83.2 85 49.4
Thecc.01G366900 Theobroma cacao HOM05D003871 ORTHO05D004621 1.2e-14 83.2 97 46.4
MSTRG.4874 Avicennia marina HOM05D003871 ORTHO05D004621 1.6e-14 82.8 85 47.1
ClCG05G001830 Citrullus lanatus HOM05D003871 ORTHO05D004621 1.6e-14 82.8 97 45.4
MELO3C006142.2 Cucumis melo HOM05D003871 ORTHO05D004621 1.6e-14 82.8 97 45.4
CsaV3_3G009220 Cucumis sativus L. HOM05D003871 ORTHO05D004621 1.6e-14 82.8 97 45.4
Potri.002G154500 Populus trichocarpa HOM05D003871 ORTHO05D004621 1.6e-14 82.8 97 44.3
Prupe.2G156700 Prunus persica HOM05D003871 ORTHO05D004621 1.6e-14 82.8 97 45.4
Rhsim01G0153400 Rhododendron simsii HOM05D003871 ORTHO05D004621 1.6e-14 82.8 97 44.3
TPR.G37846 Trifolium pratense HOM05D003871 ORTHO05D004621 1.6e-14 82.8 98 44.9
DCAR_016001 Daucus carota HOM05D003871 ORTHO05D004621 2.1e-14 82.4 97 44.3
Lsat_1_v5_gn_4_37061 Lactuca sativa HOM05D003871 ORTHO05D004621 2.1e-14 82.4 85 47.1
Hund16957 Selenicereus undatus HOM05D003871 ORTHO05D004621 2.1e-14 82.4 97 44.3
Sc23g0003210 Simmondsia chinensis HOM05D003871 ORTHO05D004621 2.1e-14 82.4 97 44.3
BcaC07g42655 Brassica carinata HOM05D003871 ORTHO05D004621 2.7e-14 82.0 97 44.3
CANSAT56G3752 Cannabis sativa HOM05D003871 ORTHO05D004621 2.7e-14 82.0 97 43.3
Lj3g0009639 Lotus japonicus HOM05D003871 ORTHO05D004621 2.7e-14 82.0 97 45.4
Medtr8g432630 Medicago truncatula HOM05D003871 ORTHO05D004621 2.7e-14 82.0 97 45.4
SalBow3G3192 Salvia bowleyana HOM05D003871 ORTHO05D004621 2.7e-14 82.0 85 49.4
Zm00001eb001110 Zea mays HOM05D003871 ORTHO05D004621 2.7e-14 82.0 97 44.3
FvH4_7g13330 Fragaria vesca HOM05D003871 ORTHO05D004621 3.5e-14 81.6 97 44.3
FAN01G1876 Fragaria x ananassa HOM05D003871 ORTHO05D004621 3.5e-14 81.6 97 44.3
FAN03G3137 Fragaria x ananassa HOM05D003871 ORTHO05D004621 3.5e-14 81.6 97 44.3
FAN06G3893 Fragaria x ananassa HOM05D003871 ORTHO05D004621 3.5e-14 81.6 97 44.3
FAN06G4052 Fragaria x ananassa HOM05D003871 ORTHO05D004621 3.5e-14 81.6 97 44.3
FAN10G0206 Fragaria x ananassa HOM05D003871 ORTHO05D004621 3.5e-14 81.6 97 44.3
FAN10G4186 Fragaria x ananassa HOM05D003871 ORTHO05D004621 3.5e-14 81.6 97 44.3
Lalb_Chr17g0339991 Lupinus albus HOM05D003871 ORTHO05D004621 3.5e-14 81.6 85 47.1
MD07G1127800 Malus domestica HOM05D003871 ORTHO05D004621 3.5e-14 81.6 97 44.3
QL08p050260 Quercus lobata HOM05D003871 ORTHO05D004621 3.5e-14 81.6 97 44.3
TWI14G1012 Tripterygium wilfordii HOM05D003871 ORTHO05D004621 3.5e-14 81.6 97 45.4
Atru.chr5.417 Acer truncatum HOM05D003871 ORTHO05D004621 4.6e-14 81.3 97 43.3
MSTRG.20801 Avicennia marina HOM05D003871 ORTHO05D004621 4.6e-14 81.3 85 48.2
EL10Ac1g00989 Beta vulgaris HOM05D003871 ORTHO05D004621 4.6e-14 81.3 97 44.3
AUR62004300 Chenopodium quinoa HOM05D003871 ORTHO05D004621 4.6e-14 81.3 97 44.3
Sabra02G0122500 Salix brachista HOM05D003871 ORTHO05D004621 4.6e-14 81.3 97 43.3
SGA_v2.0_scaffold95G28865 Striga asiatica HOM05D003871 ORTHO05D004621 4.6e-14 81.3 85 48.2
HanXRQChr17g0560011 Helianthus annuus HOM05D003871 ORTHO05D004621 6.0e-14 80.9 85 45.9
SGA_v2.0_scaffold153G37076 Striga asiatica HOM05D003871 ORTHO05D004621 6.0e-14 80.9 85 47.1
Psat4g151960 Pisum sativum HOM05D003871 ORTHO05D004621 7.9e-14 80.5 97 45.4
BcaC07g40617 Brassica carinata HOM05D003871 ORTHO05D004621 1.0e-13 80.1 85 45.9
A09p53200 Brassica napus HOM05D003871 ORTHO05D004621 1.0e-13 80.1 85 45.9
C08p35990 Brassica napus HOM05D003871 ORTHO05D004621 1.0e-13 80.1 85 45.9
BolC8t51181H Brassica oleracea HOM05D003871 ORTHO05D004621 1.0e-13 80.1 85 45.9
BraA09t40745Z Brassica rapa HOM05D003871 ORTHO05D004621 1.0e-13 80.1 85 45.9
Migut.B01700 Erythranthe guttata HOM05D003871 ORTHO05D004621 1.0e-13 80.1 85 47.1
Potri.014G075500 Populus trichocarpa HOM05D003871 ORTHO05D004621 1.3e-13 79.7 97 43.3
Sed0018711 Sechium edule HOM05D003871 ORTHO05D004621 1.8e-13 79.3 97 44.3
Sed0001471 Sechium edule HOM05D003871 ORTHO05D004621 3.0e-13 78.6 97 44.3
unitig_22.g5361 Utricularia gibba HOM05D003871 ORTHO05D004621 5.1e-13 77.8 85 43.5
ECA234G1945 Erigeron canadensis HOM05D003871 ORTHO05D005816 1.5e-12 76.3 85 44.7
BolC3t17212H Brassica oleracea HOM05D003871 ORTHO05D039068 1.9e-12 75.9 43 88.4
HanXRQChr16g0523641 Helianthus annuus HOM05D003871 ORTHO05D004621 2.5e-12 75.5 85 42.4
Psat3g113760 Pisum sativum HOM05D003871 ORTHO05D004621 2.5e-12 75.5 86 43.0
PRCOL_00001778 Prasinoderma coloniale HOM05D003871 ORTHO05D004621 2.5e-12 75.5 85 43.5
CBR_g34614 Chara braunii HOM05D000019 ORTHO05D000002 3.3e-12 75.1 90 45.6
ATR0757G035 Amborella trichopoda HOM05D003871 ORTHO05D004621 5.7e-12 74.3 74 48.6
Gorai.007G095800 Gossypium raimondii HOM05D003871 ORTHO05D004621 4.8e-11 71.2 74 47.3
Haze_27079 Corylus avellana HOM05D003871 ORTHO05D004621 1.1e-10 70.1 85 42.4
Hund27317 Selenicereus undatus HOM05D003871 ORTHO05D004621 5.3e-10 67.8 74 41.9
Cre05.g234300 Chlamydomonas reinhardtii HOM05D003871 ORTHO05D004621 6.9e-10 67.4 81 44.4
CARHR257760 Cardamine hirsuta HOM05D003871 ORTHO05D004621 9.0e-10 67.0 74 45.9
Peaxi162Scf00233g00516 Petunia axillaris HOM05D003871 ORTHO05D004621 1.5e-09 66.2 85 41.2
Sabra14G0056300 Salix brachista HOM05D003871 ORTHO05D004621 2.0e-09 65.9 120 35.0
SHI13479 Sapria himalayana HOM05D003871 ORTHO05D004621 2.0e-09 65.9 97 35.1
PSO782G0235 Papaver somniferum HOM05D003871 ORTHO05D004621 3.8e-08 61.6 70 42.9
MCO11G248 Micromonas commoda HOM05D003871 ORTHO05D004621 3.2e-07 58.5 83 38.6


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