Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g03707 Brassica carinata HOM05D002209 ORTHO05D004761 1.6e-200 702.6 365 100.0
BolC3t17231H Brassica oleracea HOM05D002209 ORTHO05D004761 1.4e-188 662.9 364 96.4
C03p49370 Brassica napus HOM05D002209 ORTHO05D004761 4.7e-184 647.9 374 92.8
BraA03t13213Z Brassica rapa HOM05D002209 ORTHO05D004761 1.8e-183 646.0 364 94.0
A03p40560 Brassica napus HOM05D002209 ORTHO05D004761 1.6e-179 632.9 367 91.8
BcaB04g18980 Brassica carinata HOM05D002209 ORTHO05D004761 1.2e-176 623.2 369 90.2
Sp3g16270 Schrenkiella parvula HOM05D002209 ORTHO05D004761 2.4e-164 582.4 368 84.2
BcaB04g20791 Brassica carinata HOM05D002209 ORTHO05D004761 9.5e-161 570.5 368 82.6
CARHR093480 Cardamine hirsuta HOM05D002209 ORTHO05D004761 9.2e-156 553.9 366 79.8
BcaC09g48771 Brassica carinata HOM05D002209 ORTHO05D004761 1.9e-153 546.2 363 80.4
AL3G31330 Arabidopsis lyrata HOM05D002209 ORTHO05D004761 4.3e-153 545.0 366 78.4
AT3G18160 Arabidopsis thaliana HOM05D002209 ORTHO05D004761 7.3e-153 544.3 366 78.4
Carub.0003s1787 Capsella rubella HOM05D002209 ORTHO05D004761 4.4e-150 535.0 366 77.3
C01p46070 Brassica napus HOM05D002209 ORTHO05D007926 6.4e-149 531.2 353 80.2
BraA01t03699Z Brassica rapa HOM05D002209 ORTHO05D007926 3.2e-148 528.9 350 80.9
Thhalv10020989m.g Eutrema salsugineum HOM05D002209 ORTHO05D004761 1.6e-147 526.6 368 77.7
BolC1t04568H Brassica oleracea HOM05D002209 ORTHO05D007926 7.8e-147 524.2 350 80.0
Thhalv10011573m.g Eutrema salsugineum HOM05D002209 ORTHO05D004761 1.5e-137 493.4 384 69.5
Sp1g35610 Schrenkiella parvula HOM05D002209 ORTHO05D004761 2.1e-136 489.6 370 71.4
CARHR038280 Cardamine hirsuta HOM05D002209 ORTHO05D004761 3.4e-134 482.3 369 69.6
AT1G48635 Arabidopsis thaliana HOM05D002209 ORTHO05D004761 1.3e-133 480.3 369 69.9
AL1G55300 Arabidopsis lyrata HOM05D002209 ORTHO05D004761 2.9e-133 479.2 369 69.9
Carub.0001s3778 Capsella rubella HOM05D002209 ORTHO05D004761 1.1e-132 477.2 369 69.6
THA.LOC104820369 Tarenaya hassleriana HOM05D002209 ORTHO05D004761 1.6e-131 473.4 366 68.0
Aa31LG10G5170 Aethionema arabicum HOM05D003754 ORTHO05D004530 6.0e-131 471.5 363 68.9
BcaB07g33725 Brassica carinata HOM05D002209 ORTHO05D004761 6.6e-130 468.0 370 68.4
A06p04280 Brassica napus HOM05D002209 ORTHO05D004761 3.3e-129 465.7 371 68.2
THA.LOC104821836 Tarenaya hassleriana HOM05D002209 ORTHO05D004761 4.3e-129 465.3 370 67.8
Aa31LG8G4990 Aethionema arabicum HOM05D002209 ORTHO05D004761 4.0e-127 458.8 356 69.7
C06p03290 Brassica napus HOM05D002209 ORTHO05D004761 8.9e-127 457.6 370 67.0
BcaC08g43072 Brassica carinata HOM05D002209 ORTHO05D004761 2.6e-126 456.1 370 66.8
BraA06t23631Z Brassica rapa HOM05D002209 ORTHO05D004761 1.5e-121 440.3 404 61.6
BolC6t35461H Brassica oleracea HOM05D002209 ORTHO05D004761 1.6e-120 436.8 400 61.8
A01p36240 Brassica napus HOM05D002209 ORTHO05D007926 2.9e-117 426.0 295 79.0
Gohir.A09G051300 Gossypium hirsutum HOM05D002209 ORTHO05D004761 8.1e-104 381.3 368 57.9
Dinv29939 Davidia involucrata HOM05D002209 ORTHO05D004761 3.1e-103 379.4 366 56.6
Gorai.006G057200 Gossypium raimondii HOM05D002209 ORTHO05D004761 6.9e-103 378.3 368 57.3
Dinv24643 Davidia involucrata HOM05D002209 ORTHO05D004761 1.2e-102 377.5 366 56.3
Gohir.D09G052400 Gossypium hirsutum HOM05D002209 ORTHO05D004761 1.5e-102 377.1 368 57.3
Rhsim07G0079200 Rhododendron simsii HOM05D002209 ORTHO05D004761 3.8e-101 372.5 366 55.5
COL.COLO4_05870 Corchorus olitorius HOM05D002209 ORTHO05D004761 4.2e-100 369.0 370 56.8
RhsimUnG0064800 Rhododendron simsii HOM05D002209 ORTHO05D004761 7.1e-100 368.2 379 54.1
Manes.06G008500 Manihot esculenta HOM05D002209 ORTHO05D004761 1.6e-99 367.1 370 53.8
Duzib084G0729 Durio zibethinus HOM05D002209 ORTHO05D004761 2.1e-99 366.7 368 55.7
PGR083G2774 Punica granatum HOM05D002209 ORTHO05D004761 2.1e-99 366.7 370 53.5
Lj9A421T102 Lonicera japonica HOM05D002209 ORTHO05D004761 2.7e-99 366.3 366 56.3
Thecc.03G048800 Theobroma cacao HOM05D002209 ORTHO05D004761 3.5e-99 365.9 371 55.3
TWI81G0085 Tripterygium wilfordii HOM05D002209 ORTHO05D004761 1.0e-98 364.4 371 52.8
GSVIVG01008394001 Vitis vinifera HOM05D002209 ORTHO05D004761 1.0e-98 364.4 370 55.7
CSS0032919 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 6.7e-98 361.7 365 54.5
CSS0009925 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 7.4e-97 358.2 364 54.1
Duzib205G0470 Durio zibethinus HOM05D002209 ORTHO05D004761 7.4e-97 358.2 368 54.1
Hma1.2p1_0669F.1_g200340 Hydrangea macrophylla HOM05D002209 ORTHO05D004761 1.3e-96 357.5 374 53.2
Potri.015G041700 Populus trichocarpa HOM05D002209 ORTHO05D004761 6.2e-96 355.1 375 53.6
Potri.012G049700 Populus trichocarpa HOM05D002209 ORTHO05D004761 8.2e-96 354.8 375 52.8
MD00G1160600 Malus domestica HOM05D002209 ORTHO05D004761 4.5e-94 349.0 370 52.4
Cc04_g06630 Coffea canephora HOM05D002209 ORTHO05D004761 8.4e-93 344.7 375 50.1
Sed0007305 Sechium edule HOM05D002209 ORTHO05D004761 7.2e-92 341.7 373 49.9
Peaxi162Scf01127g00030 Petunia axillaris HOM05D002209 ORTHO05D004761 1.6e-91 340.5 368 50.0
Nitab4.5_0001158g0020 Nicotiana tabacum HOM05D002209 ORTHO05D004761 2.1e-91 340.1 366 50.3
Prupe.5G229900 Prunus persica HOM05D002209 ORTHO05D004761 2.1e-91 340.1 371 51.5
Lalb_Chr16g0387141 Lupinus albus HOM05D002209 ORTHO05D004761 4.6e-91 339.0 376 50.0
Atru.chr9.949 Acer truncatum HOM05D002209 ORTHO05D004761 6.1e-91 338.6 375 52.5
Glyma.05G243700 Glycine max HOM05D002209 ORTHO05D004761 6.1e-91 338.6 372 52.2
CANSAT80G1163 Cannabis sativa HOM05D002209 ORTHO05D004761 1.3e-90 337.4 371 51.2
CANSAT80G2224 Cannabis sativa HOM05D002209 ORTHO05D004761 1.3e-90 337.4 371 51.2
Ciclev10008707m.g Citrus clementina HOM05D002209 ORTHO05D004761 2.3e-90 336.7 370 52.2
MD14G1233700 Malus domestica HOM05D002209 ORTHO05D004761 2.3e-90 336.7 370 51.1
Sc12g0007380 Simmondsia chinensis HOM05D002209 ORTHO05D004761 3.9e-90 335.9 366 48.9
CAN.G1129.31 Capsicum annuum HOM05D002209 ORTHO05D004761 6.7e-90 335.1 366 49.2
DCAR_011382 Daucus carota HOM05D002209 ORTHO05D004761 6.7e-90 335.1 368 50.0
Lj4g0012439 Lotus japonicus HOM05D002209 ORTHO05D004761 6.7e-90 335.1 372 48.9
Eucgr.B00855 Eucalyptus grandis HOM05D002209 ORTHO05D004761 1.1e-89 334.3 373 49.9
VMungo0251G1482 Vigna mungo HOM05D002209 ORTHO05D004761 1.1e-89 334.3 369 50.7
CsaV3_1G004130 Cucumis sativus L. HOM05D002209 ORTHO05D004761 1.9e-89 333.6 373 49.3
FAN18G1515 Fragaria x ananassa HOM05D002209 ORTHO05D004761 3.3e-89 332.8 366 51.4
PGSC0003DMG402005658 Solanum tuberosum HOM05D002209 ORTHO05D004761 4.3e-89 332.4 366 48.6
Peaxi162Scf00683g00231 Petunia axillaris HOM05D002209 ORTHO05D004761 5.7e-89 332.0 366 49.2
FAN08G3349 Fragaria x ananassa HOM05D002209 ORTHO05D004761 9.7e-89 331.3 368 50.3
FvH4_5g17050 Fragaria vesca HOM05D002209 ORTHO05D004761 2.2e-88 330.1 366 50.8
MSTRG.4560 Avicennia marina HOM05D002209 ORTHO05D004761 3.7e-88 329.3 365 49.6
RcHm_v2.0_Chr7g0178801 Rosa chinensis HOM05D002209 ORTHO05D004761 8.2e-88 328.2 367 50.1
Solyc03g119030.4 Solanum lycopersicum HOM05D002209 ORTHO05D004761 1.4e-87 327.4 370 48.1
Phvul.002G327400 Phaseolus vulgaris HOM05D002209 ORTHO05D004761 1.8e-87 327.0 372 50.0
Sopen03g037920 Solanum pennellii HOM05D002209 ORTHO05D004761 1.8e-87 327.0 370 47.8
Nitab4.5_0012369g0030 Nicotiana tabacum HOM05D002209 ORTHO05D004761 2.4e-87 326.6 381 48.0
MBI10_g07297_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 5.3e-87 325.5 370 49.2
Glyma.08G051500 Glycine max HOM05D002209 ORTHO05D004761 1.2e-86 324.3 372 50.8
HanXRQChr05g0144521 Helianthus annuus HOM05D002209 ORTHO05D004761 7.7e-86 321.6 363 47.7
Lalb_Chr09g0330521 Lupinus albus HOM05D002209 ORTHO05D004761 7.7e-86 321.6 369 48.5
Lsat_1_v5_gn_3_1001 Lactuca sativa HOM05D002209 ORTHO05D004761 6.5e-85 318.5 368 47.0
FAN13G0599 Fragaria x ananassa HOM05D002209 ORTHO05D004761 8.5e-85 318.2 368 48.9
CiPaw.16G090800 Carya illinoinensis HOM05D002209 ORTHO05D004761 1.1e-84 317.8 368 49.2
ClCG06G014470 Citrullus lanatus HOM05D002209 ORTHO05D004761 1.1e-84 317.8 370 47.8
Medtr8g106780 Medicago truncatula HOM05D002209 ORTHO05D004761 1.4e-84 317.4 371 48.2
Lalb_Chr05g0221871 Lupinus albus HOM05D002209 ORTHO05D004761 5.5e-84 315.5 377 48.5
TPR.G12929 Trifolium pratense HOM05D002209 ORTHO05D004761 5.5e-84 315.5 367 47.7
arahy.Tifrunner.gnm1.ann1.6WJC3X Arachis hypogaea HOM05D002209 ORTHO05D004761 2.1e-83 313.5 407 43.5
Nn3g18057 Nelumbo nucifera HOM05D002209 ORTHO05D004761 3.6e-83 312.8 374 47.9
vmacro16528 Vaccinium macrocarpon HOM05D002209 ORTHO05D004761 7.9e-83 311.6 371 49.1
Actinidia35110 Actinidia chinensis HOM05D002209 ORTHO05D004761 1.0e-82 311.2 322 55.0
Nitab4.5_0000150g0110 Nicotiana tabacum HOM05D002209 ORTHO05D004761 1.4e-82 310.8 387 47.0
Nn4g24077 Nelumbo nucifera HOM05D002209 ORTHO05D004761 1.8e-82 310.5 369 46.6
MSTRG.9285 Avicennia marina HOM05D002209 ORTHO05D004761 2.3e-82 310.1 366 47.8
PSO782G2563 Papaver somniferum HOM05D002209 ORTHO05D004761 1.3e-80 304.3 374 47.3
Cpa.g.sc3.426 Carica papaya HOM05D002209 ORTHO05D004761 2.2e-80 303.5 309 54.0
Aqoxy3G03975 Aquilegia oxysepala HOM05D002209 ORTHO05D004761 4.8e-80 302.4 371 45.8
ECA246G4025 Erigeron canadensis HOM05D002209 ORTHO05D004761 2.0e-78 297.0 334 48.5
Sabra15G0063000 Salix brachista HOM05D002209 ORTHO05D004761 3.4e-78 296.2 491 40.5
EL10Ac8g19603 Beta vulgaris HOM05D002209 ORTHO05D004761 4.5e-78 295.8 401 43.6
PSO063G7528 Papaver somniferum HOM05D002209 ORTHO05D004761 7.7e-78 295.0 368 47.3
TAR629G1642 Trochodendron aralioides HOM05D002209 ORTHO05D004761 6.5e-77 292.0 317 52.7
SalBow1G1036 Salvia bowleyana HOM05D002209 ORTHO05D004761 1.4e-76 290.8 393 42.7
Sabra15G0055400 Salix brachista HOM05D002209 ORTHO05D004761 1.6e-75 287.3 510 38.4
Ca_17220_v3 Cicer arietinum L. HOM05D002209 ORTHO05D004761 1.4e-74 284.3 352 46.0
TAR622G1360 Trochodendron aralioides HOM05D002209 ORTHO05D004761 3.9e-74 282.7 316 52.8
Sed0027899 Sechium edule HOM05D002209 ORTHO05D004761 1.1e-73 281.2 291 52.2
HPP92_008203 Vanilla planifolia HOM05D002209 ORTHO05D004761 1.1e-73 281.2 370 42.7
Hund22655 Selenicereus undatus HOM05D002209 ORTHO05D004761 2.6e-73 280.0 320 50.3
MELO3C017339.2 Cucumis melo HOM05D002209 ORTHO05D004761 3.3e-73 279.6 290 52.4
CDE02G4061 Ceratophyllum demersum HOM05D002209 ORTHO05D004761 3.7e-72 276.2 367 44.1
SHI19025 Sapria himalayana HOM05D002209 ORTHO05D000001 3.7e-72 276.2 373 44.5
Migut.D01447 Erythranthe guttata HOM05D002209 ORTHO05D004761 8.2e-72 275.0 368 41.6
Duzib068G1457 Durio zibethinus HOM05D002209 ORTHO05D004761 4.1e-71 272.7 371 45.0
MBI16_g47222_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 2.0e-70 270.4 371 42.9
Nitab4.5_0012395g0010 Nicotiana tabacum HOM05D002209 ORTHO05D004761 9.4e-68 261.5 318 48.4
Psat7g003880 Pisum sativum HOM05D002209 ORTHO05D004761 9.7e-65 251.5 312 47.1
Haze_18790 Corylus avellana HOM05D002209 ORTHO05D004761 7.7e-62 241.9 566 34.8
AUR62002654 Chenopodium quinoa HOM05D002209 ORTHO05D004761 3.2e-60 236.5 309 44.7
CSS0022680 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 2.7e-59 233.4 212 59.0
FAN04G3108 Fragaria x ananassa HOM05D002209 ORTHO05D004761 1.2e-57 228.0 207 57.0
SGA_v2.0_scaffold171G38932 Striga asiatica HOM05D002209 ORTHO05D004761 4.4e-57 226.1 476 33.0
Oeu017507.1 Olea europaea HOM05D002209 ORTHO05D004761 9.8e-57 224.9 208 55.3
Solyc12g040500.2 Solanum lycopersicum HOM05D002209 ORTHO05D004761 5.5e-52 209.1 227 49.8
MBI16_g47372_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D004761 2.1e-51 207.2 296 43.9
Sopen12g020100 Solanum pennellii HOM05D002209 ORTHO05D004761 2.1e-51 207.2 207 52.7
Zm00001eb098030 Zea mays HOM05D002209 ORTHO05D004761 4.0e-50 203.0 316 38.0
CSS0012524 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 1.8e-47 194.1 163 62.6
Gorai.007G186700 Gossypium raimondii HOM05D002209 ORTHO05D004761 1.8e-47 194.1 166 62.7
Mapoly0003s0191 Marchantia polymorpha HOM05D002209 ORTHO05D004761 4.1e-47 193.0 380 34.5
Hma1.2p1_0669F.1_g200330 Hydrangea macrophylla HOM05D002209 ORTHO05D004761 7.0e-47 192.2 165 60.6
Gorai.008G042300 Gossypium raimondii HOM05D002209 ORTHO05D004761 2.7e-46 190.3 166 62.0
Gohir.D08G140100 Gossypium hirsutum HOM05D002209 ORTHO05D004761 3.5e-46 189.9 166 62.0
AUR62040790 Chenopodium quinoa HOM05D002209 ORTHO05D004761 7.7e-46 188.7 306 38.2
Gorai.004G122400 Gossypium raimondii HOM05D002209 ORTHO05D004761 1.7e-45 187.6 166 61.4
SEGI_04696 Sequoiadendron giganteum HOM05D002209 ORTHO05D004761 3.8e-45 186.4 336 35.7
CSS0005213 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 1.9e-44 184.1 162 60.5
CSS0038011 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 1.9e-44 184.1 205 50.2
CSS0040553 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 7.3e-44 182.2 205 50.7
QL10p027517 Quercus lobata HOM05D002209 ORTHO05D004761 1.8e-42 177.6 202 50.5
Pp3c24_12050 Physcomitrium patens HOM05D002209 ORTHO05D004761 3.0e-42 176.8 379 32.7
Pp3c8_16550 Physcomitrium patens HOM05D002209 ORTHO05D004761 6.8e-42 175.6 381 32.8
Gohir.D13G126266 Gossypium hirsutum HOM05D002209 ORTHO05D004761 1.3e-40 171.4 166 58.4
AagrBONN_evm.TU.Sc2ySwM_344.1865 Anthoceros agrestis HOM05D002209 ORTHO05D004761 2.4e-39 167.2 382 33.0
Pp3c20_5170 Physcomitrium patens HOM05D002209 ORTHO05D004761 3.9e-37 159.8 378 30.2
CBR_g38112 Chara braunii HOM05D002209 ORTHO05D004761 5.6e-36 156.0 370 31.9
PGSC0003DMG400015821 Solanum tuberosum HOM05D002209 ORTHO05D004761 2.1e-35 154.1 164 51.2
Psat0s3278g0200 Pisum sativum HOM05D002209 ORTHO05D004761 5.2e-34 149.4 297 38.0
Gorai.008G062000 Gossypium raimondii HOM05D002209 ORTHO05D004761 1.5e-33 147.9 123 61.8
unitig_0.g802 Utricularia gibba HOM05D002209 ORTHO05D004761 1.4e-31 141.4 207 39.1
CAN.G197.13 Capsicum annuum HOM05D002209 ORTHO05D004761 1.9e-31 141.0 123 57.7
SEGI_01637 Sequoiadendron giganteum HOM05D002209 ORTHO05D004761 4.1e-31 139.8 255 36.1
CSS0016222 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 1.2e-30 138.3 230 42.6
SMO367G0254 Selaginella moellendorffii HOM05D002209 ORTHO05D004761 5.0e-29 132.9 373 28.4
GSVIVG01008387001 Vitis vinifera HOM05D002209 ORTHO05D004761 1.2e-25 121.7 165 45.5
Solyc12g040480.2 Solanum lycopersicum HOM05D002209 ORTHO05D004761 7.5e-25 119.0 159 44.0
CSS0034654 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 2.9e-24 117.1 110 59.1
Sopen12g020080 Solanum pennellii HOM05D002209 ORTHO05D004761 1.1e-23 115.2 159 42.8
Os09g0314300 Oryza sativa ssp. japonica HOM05D002209 ORTHO05D004761 7.1e-23 112.5 124 46.0
CSS0050298 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D004761 2.7e-22 110.5 152 46.1
ATR0326G049 Amborella trichopoda HOM05D002209 ORTHO05D004761 1.0e-21 108.6 172 38.4
Oeu017505.1 Olea europaea HOM05D002209 ORTHO05D004761 7.3e-20 102.4 138 45.7
PGSC0003DMG400015822 Solanum tuberosum HOM05D002209 ORTHO05D004761 2.1e-19 100.9 135 43.0
Oeu053224.1 Olea europaea HOM05D002209 ORTHO05D004761 2.8e-19 100.5 137 45.3
PRCOL_00001207 Prasinoderma coloniale HOM05D006727 ORTHO05D008408 1.1e-10 72.0 233 27.0


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