Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g03699 Brassica carinata HOM05D004512 ORTHO05D005355 5.2e-59 230.7 107 100.0
BolC3t17241H Brassica oleracea HOM05D004512 ORTHO05D005355 5.2e-59 230.7 107 100.0
A03p40660 Brassica napus HOM05D004512 ORTHO05D005355 1.5e-58 229.2 107 99.1
BraA03t13222Z Brassica rapa HOM05D004512 ORTHO05D005355 1.5e-58 229.2 107 99.1
BcaB04g18985 Brassica carinata HOM05D004512 ORTHO05D005355 2.6e-58 228.4 107 98.1
CARHR093770 Cardamine hirsuta HOM05D004512 ORTHO05D005355 4.4e-58 227.6 107 97.2
AL3G31700 Arabidopsis lyrata HOM05D004512 ORTHO05D005355 9.8e-58 226.5 107 97.2
BcaC09g48802 Brassica carinata HOM05D004512 ORTHO05D005355 9.8e-58 226.5 107 97.2
C01p45770 Brassica napus HOM05D004512 ORTHO05D005355 9.8e-58 226.5 107 97.2
BolC1t04540H Brassica oleracea HOM05D004512 ORTHO05D005355 9.8e-58 226.5 107 97.2
BraA01t03675Z Brassica rapa HOM05D004512 ORTHO05D005355 2.2e-57 225.3 107 96.3
CARHR039120 Cardamine hirsuta HOM05D004512 ORTHO05D005355 2.9e-57 224.9 107 96.3
AT3G18410 Arabidopsis thaliana HOM05D004512 ORTHO05D005355 3.7e-57 224.6 107 96.3
BcaB04g20765 Brassica carinata HOM05D004512 ORTHO05D005355 3.7e-57 224.6 107 97.2
Sp1g36030 Schrenkiella parvula HOM05D004512 ORTHO05D005355 3.7e-57 224.6 107 95.3
Thhalv10022379m.g Eutrema salsugineum HOM05D004512 ORTHO05D005355 4.9e-57 224.2 106 96.2
Carub.0003s1819 Capsella rubella HOM05D004512 ORTHO05D005355 8.3e-57 223.4 107 95.3
Thhalv10011884m.g Eutrema salsugineum HOM05D004512 ORTHO05D005355 1.1e-56 223.0 107 95.3
BcaB06g25886 Brassica carinata HOM05D004512 ORTHO05D005355 2.4e-56 221.9 107 96.3
A05p31210 Brassica napus HOM05D004512 ORTHO05D005355 2.4e-56 221.9 107 96.3
BraA05t21962Z Brassica rapa HOM05D004512 ORTHO05D005355 2.4e-56 221.9 107 96.3
BcaC05g28630 Brassica carinata HOM05D004512 ORTHO05D005355 5.4e-56 220.7 107 95.3
C05p47340 Brassica napus HOM05D004512 ORTHO05D005355 5.4e-56 220.7 107 95.3
BolC5t33461H Brassica oleracea HOM05D004512 ORTHO05D005355 5.4e-56 220.7 107 95.3
THA.LOC104820396 Tarenaya hassleriana HOM05D004512 ORTHO05D005355 5.4e-56 220.7 107 93.5
THA.LOC104821841 Tarenaya hassleriana HOM05D004512 ORTHO05D005355 7.0e-56 220.3 107 94.4
Aa31LG8G5240 Aethionema arabicum HOM05D004512 ORTHO05D005355 9.2e-56 219.9 107 94.4
Sp3g16520 Schrenkiella parvula HOM05D004512 ORTHO05D005355 2.7e-55 218.4 107 93.5
Aa31LG10G4840 Aethionema arabicum HOM05D004512 ORTHO05D005355 3.5e-55 218.0 109 93.6
AT1G49140 Arabidopsis thaliana HOM05D004512 ORTHO05D005355 3.0e-54 214.9 104 93.3
Carub.0001s3830 Capsella rubella HOM05D004512 ORTHO05D005355 3.0e-54 214.9 104 93.3
AL1G56000 Arabidopsis lyrata HOM05D004512 ORTHO05D005355 1.5e-53 212.6 104 92.3
C03p49450 Brassica napus HOM05D004512 ORTHO05D005355 1.5e-53 212.6 97 100.0
A01p35940 Brassica napus HOM05D004512 ORTHO05D005355 6.2e-52 207.2 97 95.9
Cfa019782 Carpinus fangiana HOM05D004512 ORTHO05D005355 8.3e-49 196.8 107 83.2
Haze_18669 Corylus avellana HOM05D004512 ORTHO05D005355 8.3e-49 196.8 107 83.2
vmacro12793 Vaccinium macrocarpon HOM05D004512 ORTHO05D005355 1.1e-48 196.4 107 85.0
Atru.chr9.839 Acer truncatum HOM05D004512 ORTHO05D005355 2.4e-48 195.3 107 83.2
Cpa.g.sc3.515 Carica papaya HOM05D004512 ORTHO05D005355 3.2e-48 194.9 107 80.4
Duzib205G0602 Durio zibethinus HOM05D004512 ORTHO05D005355 4.1e-48 194.5 107 83.2
Duzib205G1322 Durio zibethinus HOM05D004512 ORTHO05D005355 4.1e-48 194.5 107 83.2
Gohir.D08G105800 Gossypium hirsutum HOM05D004512 ORTHO05D005355 7.1e-48 193.7 107 82.2
Gorai.004G113100 Gossypium raimondii HOM05D004512 ORTHO05D005355 7.1e-48 193.7 107 82.2
Lj2g0019547 Lotus japonicus HOM05D004512 ORTHO05D005355 1.6e-47 192.6 107 78.5
Thecc.03G034700 Theobroma cacao HOM05D004512 ORTHO05D005355 1.6e-47 192.6 107 80.4
Gohir.A09G047600 Gossypium hirsutum HOM05D004512 ORTHO05D005355 2.7e-47 191.8 107 80.4
Gohir.D09G048700 Gossypium hirsutum HOM05D004512 ORTHO05D005355 2.7e-47 191.8 107 80.4
Manes.01G011800 Manihot esculenta HOM05D004512 ORTHO05D005355 2.7e-47 191.8 107 81.3
Prupe.5G221100 Prunus persica HOM05D004512 ORTHO05D005355 2.7e-47 191.8 107 77.6
Duzib068G0917 Durio zibethinus HOM05D004512 ORTHO05D005355 3.5e-47 191.4 107 79.4
Manes.05G137500 Manihot esculenta HOM05D004512 ORTHO05D005355 1.0e-46 189.9 107 79.4
TPR.G27937 Trifolium pratense HOM05D004512 ORTHO05D005355 1.3e-46 189.5 106 80.2
Ca_25495_v3 Cicer arietinum L. HOM05D004512 ORTHO05D005355 1.7e-46 189.1 107 79.4
Gohir.A08G094600 Gossypium hirsutum HOM05D004512 ORTHO05D005355 1.7e-46 189.1 107 80.4
Rhsim12G0143400 Rhododendron simsii HOM05D004512 ORTHO05D005355 5.1e-46 187.6 108 81.5
CiPaw.15G130400 Carya illinoinensis HOM05D004512 ORTHO05D005355 1.5e-45 186.0 107 79.4
Potri.012G056900 Populus trichocarpa HOM05D004512 ORTHO05D005355 1.5e-45 186.0 102 79.4
EL10Ac5g11436 Beta vulgaris HOM05D004512 ORTHO05D005355 1.9e-45 185.7 107 79.4
Oeu046994.1 Olea europaea HOM05D004512 ORTHO05D005355 1.9e-45 185.7 106 83.0
PGR142G1335 Punica granatum HOM05D004512 ORTHO05D005355 1.9e-45 185.7 107 78.5
Cc04_g07140 Coffea canephora HOM05D004512 ORTHO05D005355 4.3e-45 184.5 107 82.2
CiPaw.16G085900 Carya illinoinensis HOM05D004512 ORTHO05D005355 5.6e-45 184.1 107 77.6
Potri.015G054700 Populus trichocarpa HOM05D004512 ORTHO05D005355 5.6e-45 184.1 102 78.4
FvH4_5g12140 Fragaria vesca HOM05D004512 ORTHO05D005355 7.3e-45 183.7 108 78.7
FAN04G1546 Fragaria x ananassa HOM05D004512 ORTHO05D005355 7.3e-45 183.7 108 78.7
FAN08G0397 Fragaria x ananassa HOM05D004512 ORTHO05D005355 7.3e-45 183.7 108 78.7
FAN13G2727 Fragaria x ananassa HOM05D004512 ORTHO05D005355 7.3e-45 183.7 108 78.7
FAN18G2044 Fragaria x ananassa HOM05D004512 ORTHO05D005355 7.3e-45 183.7 108 78.7
Glyma.09G184500 Glycine max HOM05D004512 ORTHO05D005355 7.3e-45 183.7 107 77.6
Sabra12G0040400 Salix brachista HOM05D004512 ORTHO05D005355 7.3e-45 183.7 102 79.4
MD06G1215900 Malus domestica HOM05D004512 ORTHO05D005355 9.5e-45 183.3 105 74.3
VMungo0464G1721 Vigna mungo HOM05D004512 ORTHO05D005355 9.5e-45 183.3 107 77.6
Eucgr.K02221 Eucalyptus grandis HOM05D004512 ORTHO05D005355 1.2e-44 183.0 107 76.6
AUR62025859 Chenopodium quinoa HOM05D004512 ORTHO05D005355 1.6e-44 182.6 107 76.6
AUR62029861 Chenopodium quinoa HOM05D004512 ORTHO05D005355 1.6e-44 182.6 107 76.6
Ciclev10022984m.g Citrus clementina HOM05D004512 ORTHO05D005355 1.6e-44 182.6 106 79.2
Lalb_Chr22g0353061 Lupinus albus HOM05D004512 ORTHO05D005355 1.6e-44 182.6 107 77.6
QL10p025263 Quercus lobata HOM05D004512 ORTHO05D005355 2.1e-44 182.2 107 78.5
Hund02392 Selenicereus undatus HOM05D004512 ORTHO05D005355 2.1e-44 182.2 108 78.7
FAN18G1297 Fragaria x ananassa HOM05D004512 ORTHO05D005355 2.8e-44 181.8 103 77.7
Gorai.006G061400 Gossypium raimondii HOM05D004512 ORTHO05D005355 2.8e-44 181.8 97 83.5
Phvul.004G157200 Phaseolus vulgaris HOM05D004512 ORTHO05D005355 2.8e-44 181.8 107 75.7
RcHm_v2.0_Chr7g0185431 Rosa chinensis HOM05D004512 ORTHO05D005355 3.6e-44 181.4 107 76.6
Sed0004773 Sechium edule HOM05D004512 ORTHO05D005355 6.2e-44 180.6 106 78.3
CSS0004107 Camellia sinensis var. sinensis HOM05D004512 ORTHO05D005355 8.1e-44 180.3 102 79.4
MD14G1226500 Malus domestica HOM05D004512 ORTHO05D005355 8.1e-44 180.3 98 77.6
TWI81G1036 Tripterygium wilfordii HOM05D004512 ORTHO05D005355 8.1e-44 180.3 105 77.1
Migut.I00347 Erythranthe guttata HOM05D004512 ORTHO05D005355 1.4e-43 179.5 102 80.4
MSTRG.22945 Avicennia marina HOM05D004512 ORTHO05D005355 2.4e-43 178.7 102 79.4
Nitab4.5_0000208g0260 Nicotiana tabacum HOM05D004512 ORTHO05D005355 2.4e-43 178.7 108 78.7
MELO3C002086.2 Cucumis melo HOM05D004512 ORTHO05D005355 3.1e-43 178.3 107 77.6
CsaV3_1G006620 Cucumis sativus L. HOM05D004512 ORTHO05D005355 3.1e-43 178.3 107 77.6
Nitab4.5_0006638g0020 Nicotiana tabacum HOM05D004512 ORTHO05D005355 3.1e-43 178.3 108 77.8
PGSC0003DMG400023110 Solanum tuberosum HOM05D004512 ORTHO05D005355 4.0e-43 177.9 108 76.9
Aqoxy3G00301 Aquilegia oxysepala HOM05D004512 ORTHO05D005355 5.2e-43 177.6 104 77.9
Glyma.07G091500 Glycine max HOM05D004512 ORTHO05D005355 5.2e-43 177.6 97 81.4
Lalb_Chr24g0397761 Lupinus albus HOM05D004512 ORTHO05D005355 5.2e-43 177.6 107 75.7
Peaxi162Scf00634g00116 Petunia axillaris HOM05D004512 ORTHO05D005355 8.9e-43 176.8 104 78.8
Psat1g037680 Pisum sativum HOM05D004512 ORTHO05D005355 8.9e-43 176.8 96 81.2
arahy.Tifrunner.gnm1.ann1.HI5GUI Arachis hypogaea HOM05D004512 ORTHO05D005355 1.5e-42 176.0 97 80.4
arahy.Tifrunner.gnm1.ann1.K20T5Q Arachis hypogaea HOM05D004512 ORTHO05D005355 1.5e-42 176.0 97 80.4
Medtr6g084520 Medicago truncatula HOM05D004512 ORTHO05D005355 1.5e-42 176.0 97 78.4
Sopen12g018390 Solanum pennellii HOM05D004512 ORTHO05D005355 1.5e-42 176.0 108 75.9
SalBow5G1005 Salvia bowleyana HOM05D004512 ORTHO05D005355 4.4e-42 174.5 102 76.5
Hma1.2p1_0653F.1_g196320 Hydrangea macrophylla HOM05D004512 ORTHO05D005355 5.8e-42 174.1 102 78.4
Sc12g0007720 Simmondsia chinensis HOM05D004512 ORTHO05D005355 5.8e-42 174.1 107 72.9
SGA_v2.0_scaffold25G10991 Striga asiatica HOM05D004512 ORTHO05D005355 5.8e-42 174.1 102 78.4
SGA_v2.0_scaffold19G08815 Striga asiatica HOM05D004512 ORTHO05D005355 7.6e-42 173.7 107 74.8
CSS0044395 Camellia sinensis var. sinensis HOM05D004512 ORTHO05D005355 2.9e-41 171.8 96 80.2
DCAR_011353 Daucus carota HOM05D004512 ORTHO05D005355 1.1e-40 169.9 106 74.5
HPP92_020802 Vanilla planifolia HOM05D004512 ORTHO05D005355 1.1e-40 169.9 107 71.0
CAN.G121.2 Capsicum annuum HOM05D004512 ORTHO05D005355 1.4e-40 169.5 97 78.4
CAN.G790.56 Capsicum annuum HOM05D004512 ORTHO05D005355 1.9e-40 169.1 97 77.3
Sed0021676 Sechium edule HOM05D004512 ORTHO05D005355 1.9e-40 169.1 97 79.4
TAR374G1478 Trochodendron aralioides HOM05D004512 ORTHO05D005355 3.2e-40 168.3 102 73.5
CANSAT80G1137 Cannabis sativa HOM05D004512 ORTHO05D005355 4.1e-40 167.9 99 76.8
CANSAT80G2616 Cannabis sativa HOM05D004512 ORTHO05D005355 4.1e-40 167.9 99 76.8
ClCG00G005470 Citrullus lanatus HOM05D004512 ORTHO05D005355 3.5e-39 164.9 96 78.1
ClCG04G011140 Citrullus lanatus HOM05D004512 ORTHO05D005355 3.5e-39 164.9 96 78.1
unitig_26.g9674 Utricularia gibba HOM05D004512 ORTHO05D005355 3.5e-39 164.9 101 75.2
Solyc12g036790.2 Solanum lycopersicum HOM05D004512 ORTHO05D005355 6.0e-39 164.1 97 75.3
TAR371G0608 Trochodendron aralioides HOM05D004512 ORTHO05D005355 7.8e-39 163.7 96 77.1
PSO782G2824 Papaver somniferum HOM05D004512 ORTHO05D005355 1.7e-38 162.5 95 73.7
DCAR_015141 Daucus carota HOM05D004512 ORTHO05D005355 2.3e-38 162.2 99 74.7
Zm00001eb024750 Zea mays HOM05D004512 ORTHO05D005355 5.1e-38 161.0 104 68.3
unitig_749.g13425 Utricularia gibba HOM05D004512 ORTHO05D005355 1.5e-37 159.5 101 73.3
CDE12G0498 Ceratophyllum demersum HOM05D004512 ORTHO05D005355 2.5e-37 158.7 101 73.3
Lsat_1_v5_gn_8_144301 Lactuca sativa HOM05D004512 ORTHO05D005355 3.3e-37 158.3 99 72.7
Zm00001eb224900 Zea mays HOM05D004512 ORTHO05D005355 3.3e-37 158.3 104 67.3
ATR1125G038 Amborella trichopoda HOM05D004512 ORTHO05D005355 7.3e-37 157.1 93 75.3
ECA233G5146 Erigeron canadensis HOM05D004512 ORTHO05D005355 1.6e-36 156.0 105 69.5
HanXRQChr08g0226081 Helianthus annuus HOM05D004512 ORTHO05D005355 2.1e-36 155.6 98 72.4
TWI60G0557 Tripterygium wilfordii HOM05D004512 ORTHO05D005355 2.4e-35 152.1 94 71.3
Nitab4.5_0007985g0060 Nicotiana tabacum HOM05D004512 ORTHO05D005355 2.0e-34 149.1 89 73.0
COL.COLO4_05967 Corchorus olitorius HOM05D004512 ORTHO05D005355 6.0e-31 137.5 78 79.5
HanXRQChr16g0517341 Helianthus annuus HOM05D004512 ORTHO05D005355 7.3e-29 130.6 85 70.6
AagrBONN_evm.TU.Sc2ySwM_117.17 Anthoceros agrestis HOM05D004512 ORTHO05D005355 1.1e-27 126.7 92 62.0
Pp3c9_26150 Physcomitrium patens HOM05D004512 ORTHO05D005355 1.1e-27 126.7 89 65.2
AagrBONN_evm.TU.Sc2ySwM_228.463 Anthoceros agrestis HOM05D004512 ORTHO05D005355 1.8e-27 125.9 92 62.0
Mapoly0004s0055 Marchantia polymorpha HOM05D004512 ORTHO05D005355 1.8e-27 125.9 84 69.0
Nn3g17841 Nelumbo nucifera HOM05D004512 ORTHO05D005355 1.5e-26 122.9 68 75.0
MD14G1197200 Malus domestica HOM05D004512 ORTHO05D005355 1.1e-24 116.7 74 71.6
MD15G1306200 Malus domestica HOM05D004512 ORTHO05D005355 3.2e-24 115.2 74 64.9
CAN.G133.16 Capsicum annuum HOM05D004512 ORTHO05D005355 3.5e-23 111.7 91 61.5
CAN.G519.12 Capsicum annuum HOM05D004512 ORTHO05D005355 3.5e-23 111.7 72 69.4
BcaB02g11300 Brassica carinata HOM05D004512 ORTHO05D005355 3.0e-22 108.6 76 69.7
CBR_g39222 Chara braunii HOM05D006171 ORTHO05D007294 8.7e-22 107.1 86 57.0
Prupe.2G045100 Prunus persica HOM05D004512 ORTHO05D005355 1.9e-21 105.9 70 67.1
SMO169G0039 Selaginella moellendorffii HOM05D004512 ORTHO05D005355 5.6e-21 104.4 84 53.6
Prupe.1G218000 Prunus persica HOM05D004512 ORTHO05D005355 2.1e-20 102.4 103 49.5
Os10g0576000 Oryza sativa ssp. japonica HOM05D004512 ORTHO05D005355 1.5e-18 96.3 59 67.8
MCO12G018 Micromonas commoda HOM05D004512 ORTHO05D005355 2.6e-18 95.5 94 50.0
Duzib084G0409 Durio zibethinus HOM05D004512 ORTHO05D005355 6.0e-15 84.3 54 72.2
SEGI_01620 Sequoiadendron giganteum HOM05D004512 ORTHO05D005355 2.4e-11 72.4 50 68.0
Dinv09796 Davidia involucrata HOM05D004512 ORTHO05D005355 6.5e-09 64.3 37 78.4
Nitab4.5_0001194g0030 Nicotiana tabacum HOM05D004512 ORTHO05D005355 1.9e-08 62.8 61 55.7
PRCOL_00001312 Prasinoderma coloniale HOM05D004512 ORTHO05D005355 1.2e-07 60.1 70 41.4
Actinidia35087 Actinidia chinensis HOM05D004512 ORTHO05D005355 3.0e-06 55.5 37 70.3


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