Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g03482 Brassica carinata HOM05D006289 ORTHO05D032299 7.6e-149 530.4 256 100.0
C03p52020 Brassica napus HOM05D006289 ORTHO05D032299 1.1e-126 456.8 221 100.0
BolC3t17484H Brassica oleracea HOM05D006289 ORTHO05D032299 1.1e-126 456.8 221 100.0
BcaC05g27035 Brassica carinata HOM05D006289 ORTHO05D032057 5.3e-41 172.2 243 41.2
C05p28920 Brassica napus HOM05D006289 ORTHO05D032057 5.3e-41 172.2 243 41.2
BolC5t31614H Brassica oleracea HOM05D006289 ORTHO05D032057 5.3e-41 172.2 243 41.2
BcaC04g20743 Brassica carinata HOM05D006289 ORTHO05D027118 7.1e-30 135.2 243 35.8
C09p39660 Brassica napus HOM05D006289 ORTHO05D027118 3.0e-28 129.8 244 35.7
BolC9t56845H Brassica oleracea HOM05D006289 ORTHO05D027118 3.0e-28 129.8 244 35.7
A09p28360 Brassica napus HOM05D006289 ORTHO05D027118 4.3e-27 125.9 107 54.2
BcaB04g17888 Brassica carinata HOM05D005627 ORTHO05D017568 1.6e-26 124.0 208 34.6
BcaB06g26983 Brassica carinata HOM05D005627 ORTHO05D039808 2.1e-26 123.6 248 33.5
BcaB04g18536 Brassica carinata HOM05D005627 ORTHO05D009842 4.9e-23 112.5 123 47.2
A09p28380 Brassica napus HOM05D005627 ORTHO05D021730 1.1e-22 111.3 111 49.5
BcaB08g34566 Brassica carinata HOM05D005627 ORTHO05D009842 1.4e-22 110.9 94 55.3
BraA05t20012Z Brassica rapa HOM05D005627 ORTHO05D021730 3.2e-22 109.8 104 53.8
BraA01t02126Z Brassica rapa HOM05D005627 ORTHO05D021730 4.2e-22 109.4 104 53.8
BcaB05g23251 Brassica carinata HOM05D005627 ORTHO05D009842 5.5e-22 109.0 148 43.2
BcaC05g27033 Brassica carinata HOM05D005627 ORTHO05D031886 5.5e-22 109.0 87 59.8
C05p28910 Brassica napus HOM05D005627 ORTHO05D031886 5.5e-22 109.0 87 59.8
BolC5t31612H Brassica oleracea HOM05D005627 ORTHO05D031886 5.5e-22 109.0 87 59.8
BcaB03g16259 Brassica carinata HOM05D005627 ORTHO05D021730 2.7e-21 106.7 143 44.1
C05p37190 Brassica napus HOM05D005627 ORTHO05D024275 2.7e-21 106.7 88 56.8
BcaB01g00831 Brassica carinata HOM05D005627 ORTHO05D009842 3.5e-21 106.3 238 32.8
BraA05t20010Z Brassica rapa HOM05D006289 ORTHO05D028190 6.0e-21 105.5 96 53.1
BcaC04g21092 Brassica carinata HOM05D005627 ORTHO05D031749 3.0e-20 103.2 87 56.3
C09p35790 Brassica napus HOM05D005627 ORTHO05D031749 3.0e-20 103.2 87 56.3
BolC9t56413H Brassica oleracea HOM05D005627 ORTHO05D031749 3.0e-20 103.2 87 56.3
C09p39670 Brassica napus HOM05D005627 ORTHO05D021730 3.9e-20 102.8 106 47.2
BcaB01g00118 Brassica carinata HOM05D005627 ORTHO05D009842 6.7e-20 102.1 87 55.2
BolC9t56847H Brassica oleracea HOM05D005627 ORTHO05D021730 8.7e-20 101.7 254 31.1
BcaB04g19296 Brassica carinata HOM05D006289 ORTHO05D017564 3.3e-19 99.8 88 46.6
BcaB08g34781 Brassica carinata HOM05D005627 ORTHO05D009842 5.7e-19 99.0 92 48.9
C09p12390 Brassica napus HOM05D005627 ORTHO05D032198 5.7e-19 99.0 120 47.5
BcaC03g16702 Brassica carinata HOM05D006289 ORTHO05D039115 1.3e-18 97.8 80 52.5
BcaC04g19885 Brassica carinata HOM05D005627 ORTHO05D017564 1.3e-18 97.8 87 52.9
BolC2t10570H Brassica oleracea HOM05D006289 ORTHO05D040995 1.3e-18 97.8 137 42.3
BcaB04g19628 Brassica carinata HOM05D005627 ORTHO05D017564 3.7e-18 96.3 92 44.6
C01p43410 Brassica napus HOM05D006289 ORTHO05D017568 3.7e-18 96.3 90 50.0
C02p45490 Brassica napus HOM05D006289 ORTHO05D039115 4.8e-18 95.9 105 45.7
BcaC08g47004 Brassica carinata HOM05D005627 ORTHO05D019933 1.1e-17 94.7 94 46.8
BolC3t18952H Brassica oleracea HOM05D006289 ORTHO05D017568 1.1e-17 94.7 90 48.9
BcaB01g01914 Brassica carinata HOM05D005627 ORTHO05D009842 4.1e-17 92.8 248 30.6
BcaC09g49023 Brassica carinata HOM05D006289 ORTHO05D018698 4.1e-17 92.8 125 43.2
BraA02t08906Z Brassica rapa HOM05D005627 ORTHO05D019933 4.1e-17 92.8 87 50.6
A04p11360 Brassica napus HOM05D005627 ORTHO05D019933 1.2e-16 91.3 87 49.4
BraA04t16798Z Brassica rapa HOM05D005627 ORTHO05D019933 1.2e-16 91.3 87 49.4
BcaC04g19240 Brassica carinata HOM05D006289 ORTHO05D017568 1.5e-16 90.9 90 51.1
BcaB03g16579 Brassica carinata HOM05D006289 ORTHO05D019933 2.0e-16 90.5 87 46.0
C03p66840 Brassica napus HOM05D006289 ORTHO05D017568 2.0e-16 90.5 90 47.8
BolC9t58083H Brassica oleracea HOM05D006289 ORTHO05D018698 3.4e-16 89.7 92 47.8
C08p09320 Brassica napus HOM05D006289 ORTHO05D017568 4.5e-16 89.4 67 58.2
BolC9t59378H Brassica oleracea HOM05D006289 ORTHO05D017568 4.5e-16 89.4 90 51.1
BcaB07g30175 Brassica carinata HOM05D005627 ORTHO05D019933 7.7e-16 88.6 87 44.8
BcaC08g46979 Brassica carinata HOM05D005627 ORTHO05D019933 2.2e-15 87.0 116 37.9
C03p74240 Brassica napus HOM05D006289 ORTHO05D028190 1.9e-14 84.0 70 52.9
BolC3t19682H Brassica oleracea HOM05D006289 ORTHO05D028190 1.9e-14 84.0 70 52.9
BcaB03g14785 Brassica carinata HOM05D006289 ORTHO05D009842 4.2e-14 82.8 205 31.7
BcaB03g12380 Brassica carinata HOM05D006289 ORTHO05D092672 1.6e-13 80.9 114 40.4
A04p16270 Brassica napus HOM05D006289 ORTHO05D019882 1.6e-13 80.9 100 45.0
A08p09530 Brassica napus HOM05D006289 ORTHO05D019882 1.6e-13 80.9 100 45.0
BraA08t32951Z Brassica rapa HOM05D006289 ORTHO05D019882 1.6e-13 80.9 100 45.0
A05p27900 Brassica napus HOM05D006289 ORTHO05D009842 2.1e-13 80.5 133 39.1
BraA04t17266Z Brassica rapa HOM05D006289 ORTHO05D019882 2.7e-13 80.1 100 45.0
C01p11540 Brassica napus HOM05D005627 ORTHO05D009842 3.6e-13 79.7 83 44.6
A07p02750 Brassica napus HOM05D006289 ORTHO05D009842 6.1e-13 79.0 76 50.0
A01p24510 Brassica napus HOM05D006289 ORTHO05D016037 1.0e-12 78.2 76 47.4
BraA07t28814Z Brassica rapa HOM05D006289 ORTHO05D009842 1.8e-12 77.4 103 42.7
BcaB01g01204 Brassica carinata HOM05D006289 ORTHO05D019882 2.3e-12 77.0 217 28.6
A02p27270 Brassica napus HOM05D006289 ORTHO05D040814 3.9e-12 76.3 92 44.6
BraA02t07752Z Brassica rapa HOM05D006289 ORTHO05D040814 3.9e-12 76.3 92 44.6
BcaB04g18139 Brassica carinata HOM05D006289 ORTHO05D009842 6.7e-12 75.5 81 46.9
BraA06t25337Z Brassica rapa HOM05D006289 ORTHO05D009842 6.7e-12 75.5 76 48.7
A09p34760 Brassica napus HOM05D006289 ORTHO05D009842 8.8e-12 75.1 76 50.0
A05p13630 Brassica napus HOM05D006289 ORTHO05D027692 1.5e-11 74.3 136 31.6
BraA05t20302Z Brassica rapa HOM05D006289 ORTHO05D027692 1.5e-11 74.3 136 31.6
C01p21290 Brassica napus HOM05D006289 ORTHO05D009842 2.0e-11 73.9 81 46.9
C02p24040 Brassica napus HOM05D006289 ORTHO05D009842 2.0e-11 73.9 102 39.2
BolC8t48148H Brassica oleracea HOM05D006289 ORTHO05D033772 2.0e-11 73.9 154 36.4
BcaB06g28130 Brassica carinata HOM05D006289 ORTHO05D016037 3.3e-11 73.2 68 50.0
A01p23190 Brassica napus HOM05D006289 ORTHO05D033772 4.3e-11 72.8 231 29.9
BraA01t02228Z Brassica rapa HOM05D006289 ORTHO05D033772 4.3e-11 72.8 231 29.9
BraA04t16495Z Brassica rapa HOM05D006289 ORTHO05D016037 4.3e-11 72.8 76 44.7
BraA08t34504Z Brassica rapa HOM05D006289 ORTHO05D039808 4.3e-11 72.8 206 26.7
A02p12540 Brassica napus HOM05D006289 ORTHO05D009842 1.7e-10 70.9 87 41.4
C09p42080 Brassica napus HOM05D006289 ORTHO05D016037 1.7e-10 70.9 83 43.4
BraA05t21307Z Brassica rapa HOM05D006289 ORTHO05D009842 1.7e-10 70.9 102 37.3
BraA10t43450Z Brassica rapa HOM05D006289 ORTHO05D009842 1.7e-10 70.9 87 41.4
C07p21860 Brassica napus HOM05D006289 ORTHO05D009842 6.3e-10 68.9 102 35.3
A05p28230 Brassica napus HOM05D006289 ORTHO05D009842 1.4e-09 67.8 87 40.2
BraA05t21704Z Brassica rapa HOM05D006289 ORTHO05D009842 1.4e-09 67.8 87 40.2
BcaB02g10844 Brassica carinata HOM05D006289 ORTHO05D016037 3.1e-09 66.6 207 29.0
BcaNung00230 Brassica carinata HOM05D006289 ORTHO05D027553 3.1e-09 66.6 76 47.4
BolC7t42041H Brassica oleracea HOM05D006289 ORTHO05D016037 6.9e-09 65.5 69 44.9
BraA07t28074Z Brassica rapa HOM05D006289 ORTHO05D009842 6.9e-09 65.5 106 35.8
C07p15540 Brassica napus HOM05D006289 ORTHO05D016037 2.0e-08 63.9 69 44.9
BraA03t09393Z Brassica rapa HOM05D006289 ORTHO05D016037 2.6e-08 63.5 256 26.2
BcaC06g34913 Brassica carinata HOM05D006289 ORTHO05D009842 5.9e-08 62.4 102 35.3
BcaC06g35711 Brassica carinata HOM05D008838 ORTHO05D039997 7.7e-08 62.0 112 35.7
A02p36990 Brassica napus HOM05D000042 ORTHO05D033718 1.7e-07 60.8 143 30.8
BraA02t08686Z Brassica rapa HOM05D000042 ORTHO05D033718 1.7e-07 60.8 143 30.8
C05p37160 Brassica napus HOM05D006289 ORTHO05D099813 2.9e-07 60.1 75 40.0
A03p51090 Brassica napus HOM05D008838 ORTHO05D039997 3.8e-07 59.7 80 40.0
C09p65560 Brassica napus HOM05D006289 ORTHO05D017568 3.8e-07 59.7 53 50.9
BcaC09g49041 Brassica carinata HOM05D006289 ORTHO05D032439 5.0e-07 59.3 69 42.0
C02p52110 Brassica napus HOM05D005627 ORTHO05D040212 5.0e-07 59.3 51 51.0
BolC2t11295H Brassica oleracea HOM05D005627 ORTHO05D040212 5.0e-07 59.3 51 51.0
BolC9t58939H Brassica oleracea HOM05D008838 ORTHO05D011792 5.0e-07 59.3 89 36.0
BcaC09g48466 Brassica carinata HOM05D008838 ORTHO05D011792 1.1e-06 58.2 79 38.0
A05p20430 Brassica napus HOM05D006289 ORTHO05D009842 1.1e-06 58.2 76 43.4
BraA01t02123Z Brassica rapa HOM05D006289 ORTHO05D028190 1.1e-06 58.2 185 28.6
BraSC36t46060Z Brassica rapa HOM05D005627 ORTHO05D042212 2.5e-06 57.0 91 37.4
BolC4t26246H Brassica oleracea HOM05D008838 ORTHO05D017574 3.2e-06 56.6 83 38.6
BraA07t28776Z Brassica rapa HOM05D005627 ORTHO05D017568 3.2e-06 56.6 51 49.0
BcaB08g35417 Brassica carinata HOM05D006289 ORTHO05D024275 7.2e-06 55.5 71 39.4
A05p23620 Brassica napus HOM05D008838 ORTHO05D017574 9.4e-06 55.1 83 37.3
A05p27890 Brassica napus HOM05D005627 ORTHO05D028293 9.4e-06 55.1 80 40.0
BraA05t21230Z Brassica rapa HOM05D008838 ORTHO05D017574 9.4e-06 55.1 83 37.3


User provided reference genes

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