Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g03468 Brassica carinata HOM05D008384 ORTHO05D009842 2.8e-64 248.4 122 100.0
C06p00830 Brassica napus HOM05D008384 ORTHO05D009842 5.6e-49 197.6 113 81.4
C03p31500 Brassica napus HOM05D015892 ORTHO05D009842 2.3e-42 175.6 113 70.8
C04p42370 Brassica napus HOM05D015892 ORTHO05D009842 2.5e-41 172.2 113 72.6
C07p60290 Brassica napus HOM05D015892 ORTHO05D009842 4.7e-40 167.9 118 66.1
BraA04t16529Z Brassica rapa HOM05D015892 ORTHO05D009842 4.7e-40 167.9 113 69.9
BcaC01g04977 Brassica carinata HOM05D015892 ORTHO05D009842 8.6e-34 147.1 113 63.7
BcaB07g31665 Brassica carinata HOM05D008384 ORTHO05D009842 1.0e-26 123.6 111 50.5
BcaC03g14591 Brassica carinata HOM05D008384 ORTHO05D009842 2.8e-24 115.5 80 66.2
C01p40360 Brassica napus HOM05D008384 ORTHO05D009842 1.8e-23 112.8 113 45.1
BcaB05g24894 Brassica carinata HOM05D008384 ORTHO05D009842 6.9e-23 110.9 113 45.1
BolC2t07876H Brassica oleracea HOM05D008384 ORTHO05D009842 2.0e-22 109.4 109 45.0
C07p35890 Brassica napus HOM05D008384 ORTHO05D016044 2.6e-22 109.0 109 47.7
BcaB03g14887 Brassica carinata HOM05D008384 ORTHO05D009842 4.9e-21 104.8 129 42.6
BolC2t10222H Brassica oleracea HOM05D008384 ORTHO05D009842 5.4e-20 101.3 113 47.8
C03p24860 Brassica napus HOM05D008384 ORTHO05D009842 7.1e-20 100.9 113 45.1
BcaB01g01529 Brassica carinata HOM05D008384 ORTHO05D009842 9.3e-20 100.5 96 47.9
BraA01t02884Z Brassica rapa HOM05D015892 ORTHO05D009842 2.7e-19 99.0 60 75.0
SpUn0001_0070 Schrenkiella parvula HOM05D008384 ORTHO05D009842 4.6e-19 98.2 99 46.5
BolC7t41062H Brassica oleracea HOM05D008384 ORTHO05D009842 6.0e-19 97.8 106 45.3
BcaC08g45148 Brassica carinata HOM05D008384 ORTHO05D009842 1.0e-18 97.1 109 41.3
BcaB06g27189 Brassica carinata HOM05D066470 ORTHO05D009842 2.1e-16 89.4 113 40.7
BcaB05g23720 Brassica carinata HOM05D008384 ORTHO05D009842 3.6e-16 88.6 97 46.4
BraA07t28814Z Brassica rapa HOM05D006289 ORTHO05D009842 1.4e-15 86.7 113 34.5
BraA03t09393Z Brassica rapa HOM05D006289 ORTHO05D016037 2.4e-15 85.9 113 36.3
BcaB06g28130 Brassica carinata HOM05D006289 ORTHO05D016037 3.1e-15 85.5 113 33.6
A01p24510 Brassica napus HOM05D006289 ORTHO05D016037 1.2e-14 83.6 113 32.7
BcaB02g10844 Brassica carinata HOM05D006289 ORTHO05D016037 1.5e-14 83.2 113 34.5
BraA04t16495Z Brassica rapa HOM05D006289 ORTHO05D016037 1.5e-14 83.2 113 31.9
BraA10t42593Z Brassica rapa HOM05D006289 ORTHO05D009842 1.5e-14 83.2 113 35.4
A05p20430 Brassica napus HOM05D006289 ORTHO05D009842 2.0e-14 82.8 113 32.7
BolC7t42041H Brassica oleracea HOM05D006289 ORTHO05D016037 2.6e-14 82.4 113 34.5
A02p12540 Brassica napus HOM05D006289 ORTHO05D009842 4.5e-14 81.6 113 34.5
A05p23770 Brassica napus HOM05D006289 ORTHO05D042070 4.5e-14 81.6 113 35.4
BraA05t21247Z Brassica rapa HOM05D006289 ORTHO05D042070 4.5e-14 81.6 113 35.4
BraA10t43450Z Brassica rapa HOM05D006289 ORTHO05D009842 4.5e-14 81.6 113 34.5
BcaC06g35485 Brassica carinata HOM05D006289 ORTHO05D016037 1.3e-13 80.1 113 32.7
C07p21860 Brassica napus HOM05D006289 ORTHO05D009842 1.3e-13 80.1 113 35.4
BcaC04g20562 Brassica carinata HOM05D006289 ORTHO05D016037 2.9e-13 79.0 95 34.7
C07p15540 Brassica napus HOM05D006289 ORTHO05D016037 4.9e-13 78.2 113 32.7
BraA05t21307Z Brassica rapa HOM05D006289 ORTHO05D009842 4.9e-13 78.2 113 34.5
BcaB07g33659 Brassica carinata HOM05D008384 ORTHO05D009842 1.1e-12 77.0 103 36.9
A01p23190 Brassica napus HOM05D006289 ORTHO05D033772 1.1e-12 77.0 113 30.1
A10p07450 Brassica napus HOM05D006289 ORTHO05D009842 1.1e-12 77.0 120 30.8
C04p12610 Brassica napus HOM05D005627 ORTHO05D011792 1.1e-12 77.0 113 35.4
BraA01t02228Z Brassica rapa HOM05D006289 ORTHO05D033772 1.1e-12 77.0 113 30.1
BcaC02g11662 Brassica carinata HOM05D005627 ORTHO05D011792 1.9e-12 76.3 113 35.4
BcaNung00230 Brassica carinata HOM05D006289 ORTHO05D027553 2.4e-12 75.9 113 32.7
BcaC05g27687 Brassica carinata HOM05D005627 ORTHO05D021837 5.4e-12 74.7 113 29.2
A09p34760 Brassica napus HOM05D006289 ORTHO05D009842 5.4e-12 74.7 113 30.1
C05p36670 Brassica napus HOM05D008838 ORTHO05D017578 5.4e-12 74.7 113 29.2
BolC7t41682H Brassica oleracea HOM05D005627 ORTHO05D011976 5.4e-12 74.7 111 30.6
C05p48960 Brassica napus HOM05D008838 ORTHO05D017578 7.1e-12 74.3 113 29.2
C06p38200 Brassica napus HOM05D005627 ORTHO05D011976 7.1e-12 74.3 111 31.5
A05p28230 Brassica napus HOM05D006289 ORTHO05D009842 9.3e-12 73.9 113 32.7
BolC8t48148H Brassica oleracea HOM05D006289 ORTHO05D033772 9.3e-12 73.9 113 29.2
BraA05t21704Z Brassica rapa HOM05D006289 ORTHO05D009842 9.3e-12 73.9 113 32.7
BcaB07g33986 Brassica carinata HOM05D008384 ORTHO05D009842 2.1e-11 72.8 113 34.5
BcaB08g34566 Brassica carinata HOM05D005627 ORTHO05D009842 2.1e-11 72.8 113 31.9
C09p31540 Brassica napus HOM05D008384 ORTHO05D042359 2.7e-11 72.4 86 41.9
BolC1t03992H Brassica oleracea HOM05D008384 ORTHO05D009842 3.5e-11 72.0 67 47.8
BolC7t41685H Brassica oleracea HOM05D005627 ORTHO05D011976 3.5e-11 72.0 111 32.4
BcaC06g36744 Brassica carinata HOM05D008838 ORTHO05D011792 4.6e-11 71.6 113 27.4
C07p12180 Brassica napus HOM05D005627 ORTHO05D011976 4.6e-11 71.6 111 30.6
C09p22240 Brassica napus HOM05D008384 ORTHO05D016044 6.0e-11 71.2 63 50.8
BraA06t25337Z Brassica rapa HOM05D006289 ORTHO05D009842 6.0e-11 71.2 113 29.2
BcaC05g27033 Brassica carinata HOM05D005627 ORTHO05D031886 1.0e-10 70.5 113 30.1
A07p02750 Brassica napus HOM05D006289 ORTHO05D009842 1.0e-10 70.5 113 28.3
C05p28910 Brassica napus HOM05D005627 ORTHO05D031886 1.0e-10 70.5 113 30.1
BolC5t31612H Brassica oleracea HOM05D005627 ORTHO05D031886 1.0e-10 70.5 113 30.1
BolC9t58939H Brassica oleracea HOM05D008838 ORTHO05D011792 1.0e-10 70.5 113 27.4
BolC8t49548H Brassica oleracea HOM05D008838 ORTHO05D011792 1.3e-10 70.1 109 30.3
BraA05t20010Z Brassica rapa HOM05D006289 ORTHO05D028190 1.3e-10 70.1 109 35.8
C07p12150 Brassica napus HOM05D005627 ORTHO05D011976 2.3e-10 69.3 111 29.7
C01p21290 Brassica napus HOM05D006289 ORTHO05D009842 3.0e-10 68.9 113 27.4
BcaC05g27915 Brassica carinata HOM05D005627 ORTHO05D011792 6.7e-10 67.8 96 31.2
BolC7t41624H Brassica oleracea HOM05D006289 ORTHO05D027553 8.7e-10 67.4 113 29.2
A07p31520 Brassica napus HOM05D008838 ORTHO05D028150 1.1e-09 67.0 109 32.1
BolC9t56010H Brassica oleracea HOM05D008384 ORTHO05D042359 1.1e-09 67.0 82 40.2
BcaB01g00118 Brassica carinata HOM05D005627 ORTHO05D009842 1.5e-09 66.6 113 28.3
BcaB04g18139 Brassica carinata HOM05D006289 ORTHO05D009842 1.9e-09 66.2 105 28.6
A02p27270 Brassica napus HOM05D006289 ORTHO05D040814 1.9e-09 66.2 113 26.5
A05p27900 Brassica napus HOM05D006289 ORTHO05D009842 1.9e-09 66.2 113 26.5
A09p06670 Brassica napus HOM05D006289 ORTHO05D009842 1.9e-09 66.2 113 26.5
A10p17400 Brassica napus HOM05D008838 ORTHO05D028150 1.9e-09 66.2 109 31.2
BraA02t07752Z Brassica rapa HOM05D006289 ORTHO05D040814 1.9e-09 66.2 113 26.5
BcaB07g33633 Brassica carinata HOM05D008384 ORTHO05D009842 2.5e-09 65.9 84 42.9
BcaC08g44143 Brassica carinata HOM05D008838 ORTHO05D011792 3.3e-09 65.5 113 28.3
C09p37890 Brassica napus HOM05D013280 ORTHO05D011792 3.3e-09 65.5 89 34.8
BolC7t41413H Brassica oleracea HOM05D005627 ORTHO05D011976 3.3e-09 65.5 109 27.5
C09p30140 Brassica napus HOM05D005627 ORTHO05D042654 4.3e-09 65.1 111 27.0
BcaB07g33832 Brassica carinata HOM05D008384 ORTHO05D009842 7.4e-09 64.3 109 36.7
BolC2t11345H Brassica oleracea HOM05D008384 ORTHO05D009842 9.6e-09 63.9 87 40.2
Sp4g09860 Schrenkiella parvula HOM05D005627 ORTHO05D011792 1.3e-08 63.5 111 31.5
BcaC05g27914 Brassica carinata HOM05D005627 ORTHO05D011792 2.1e-08 62.8 96 30.2
BcaC08g44443 Brassica carinata HOM05D008838 ORTHO05D017578 2.8e-08 62.4 97 30.9
C01p10680 Brassica napus HOM05D005627 ORTHO05D011792 2.8e-08 62.4 63 41.3
BolC5t30494H Brassica oleracea HOM05D006289 ORTHO05D009842 2.8e-08 62.4 95 28.4
BcaB04g18138 Brassica carinata HOM05D005627 ORTHO05D013519 4.8e-08 61.6 91 29.7
BcaC08g47004 Brassica carinata HOM05D005627 ORTHO05D019933 4.8e-08 61.6 95 30.5
C07p34790 Brassica napus HOM05D008838 ORTHO05D028150 4.8e-08 61.6 109 30.3
BolC7t44007H Brassica oleracea HOM05D005627 ORTHO05D028150 4.8e-08 61.6 109 29.4
C06p06910 Brassica napus HOM05D005627 ORTHO05D013519 1.1e-07 60.5 91 27.5
BcaB01g01127 Brassica carinata HOM05D006289 ORTHO05D017564 2.4e-07 59.3 113 30.1
A09p28380 Brassica napus HOM05D005627 ORTHO05D021730 3.1e-07 58.9 113 28.3
BcaB03g15637 Brassica carinata HOM05D009418 ORTHO05D027366 4.0e-07 58.5 104 27.9
BcaC04g19885 Brassica carinata HOM05D005627 ORTHO05D017564 4.0e-07 58.5 113 28.3
BcaB04g19296 Brassica carinata HOM05D006289 ORTHO05D017564 9.0e-07 57.4 113 30.1
BcaB07g30175 Brassica carinata HOM05D005627 ORTHO05D019933 9.0e-07 57.4 113 25.7
BcaB08g34625 Brassica carinata HOM05D008384 ORTHO05D009842 1.2e-06 57.0 74 45.9
BcaC06g36127 Brassica carinata HOM05D013280 ORTHO05D011792 1.2e-06 57.0 113 29.2
A03p31870 Brassica napus HOM05D005627 ORTHO05D027884 2.0e-06 56.2 105 24.8
A03p51090 Brassica napus HOM05D008838 ORTHO05D039997 2.0e-06 56.2 105 24.8
A07p06840 Brassica napus HOM05D008384 ORTHO05D009842 2.6e-06 55.8 113 31.0
BraA05t20012Z Brassica rapa HOM05D005627 ORTHO05D021730 2.6e-06 55.8 95 27.4
BraA08t34214Z Brassica rapa HOM05D008838 ORTHO05D021837 2.6e-06 55.8 70 32.9
A01p23200 Brassica napus HOM05D001038 ORTHO05D000395 3.4e-06 55.5 109 27.5
BraA01t02229Z Brassica rapa HOM05D005627 ORTHO05D013519 3.4e-06 55.5 109 27.5
BraA06t24543Z Brassica rapa HOM05D005627 ORTHO05D027884 3.4e-06 55.5 105 24.8
BolC2t11294H Brassica oleracea HOM05D006289 ORTHO05D002086 4.5e-06 55.1 95 28.4
BcaB01g01914 Brassica carinata HOM05D005627 ORTHO05D009842 5.8e-06 54.7 113 26.5
BcaB03g16259 Brassica carinata HOM05D005627 ORTHO05D021730 5.8e-06 54.7 113 26.5
C07p09750 Brassica napus HOM05D005627 ORTHO05D011976 5.8e-06 54.7 76 31.6
BolC5t33636H Brassica oleracea HOM05D008838 ORTHO05D021837 5.8e-06 54.7 70 30.0
C01p43410 Brassica napus HOM05D006289 ORTHO05D017568 7.6e-06 54.3 109 29.4
C07p07500 Brassica napus HOM05D013280 ORTHO05D011792 7.6e-06 54.3 66 40.9
BolC5t32399H Brassica oleracea HOM05D008838 ORTHO05D021837 7.6e-06 54.3 70 30.0


User provided reference genes

Program Settings