Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g03464 Brassica carinata HOM05D020076 ORTHO05D021593 4.1e-25 117.9 90 100.0
C03p52200 Brassica napus HOM05D020076 ORTHO05D021593 4.1e-25 117.9 90 100.0
BolC3t17500H Brassica oleracea HOM05D020076 ORTHO05D021593 4.1e-25 117.9 90 100.0
A03p42610 Brassica napus HOM05D020076 ORTHO05D021593 1.0e-23 113.2 90 97.8
BraA03t13409Z Brassica rapa HOM05D020076 ORTHO05D021593 1.0e-23 113.2 90 97.8
BcaB04g19193 Brassica carinata HOM05D020076 ORTHO05D021593 3.1e-20 101.7 58 91.4
BcaC09g49150 Brassica carinata HOM05D003807 ORTHO05D002847 6.0e-08 60.8 77 50.6
A01p33000 Brassica napus HOM05D003807 ORTHO05D002847 6.0e-08 60.8 77 50.6
C01p42110 Brassica napus HOM05D003807 ORTHO05D002847 6.0e-08 60.8 77 50.6
BolC1t04173H Brassica oleracea HOM05D003807 ORTHO05D002847 6.0e-08 60.8 77 50.6
BraA01t03420Z Brassica rapa HOM05D003807 ORTHO05D002847 6.0e-08 60.8 77 50.6
BcaB04g20540 Brassica carinata HOM05D003807 ORTHO05D002847 1.7e-07 59.3 77 49.4
AL3G36350 Arabidopsis lyrata HOM05D003807 ORTHO05D002847 2.3e-07 58.9 77 49.4
AT3G22160 Arabidopsis thaliana HOM05D003807 ORTHO05D002847 2.3e-07 58.9 77 49.4
BcaB06g26318 Brassica carinata HOM05D003807 ORTHO05D002847 2.3e-07 58.9 77 49.4
BcaC05g28098 Brassica carinata HOM05D003807 ORTHO05D002847 2.3e-07 58.9 77 49.4
C05p41250 Brassica napus HOM05D003807 ORTHO05D002847 2.3e-07 58.9 77 49.4
BolC5t32867H Brassica oleracea HOM05D003807 ORTHO05D002847 2.3e-07 58.9 77 49.4
Carub.0003s2233 Capsella rubella HOM05D003807 ORTHO05D002847 2.3e-07 58.9 77 49.4
BraA05t21543Z Brassica rapa HOM05D003807 ORTHO05D002847 5.1e-07 57.8 77 48.1
Sp3g19970 Schrenkiella parvula HOM05D003807 ORTHO05D002847 8.7e-07 57.0 77 48.1
AT4G15120 Arabidopsis thaliana HOM05D003807 ORTHO05D002847 1.1e-06 56.6 56 55.4
Thhalv10021568m.g Eutrema salsugineum HOM05D003807 ORTHO05D002847 1.9e-06 55.8 76 47.4
CARHR221860 Cardamine hirsuta HOM05D003807 ORTHO05D002847 4.3e-06 54.7 53 52.8
Sp7g13350 Schrenkiella parvula HOM05D003807 ORTHO05D002847 4.3e-06 54.7 55 52.7
AL7G40590 Arabidopsis lyrata HOM05D003807 ORTHO05D002847 7.3e-06 53.9 55 52.7


User provided reference genes

Program Settings