Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g03380 Brassica carinata HOM05D000325 ORTHO05D094606 3.3e-75 285.0 150 100.0
BcaC04g18766 Brassica carinata HOM05D000325 ORTHO05D039234 3.3e-59 231.9 137 89.1
C09p59450 Brassica napus HOM05D000325 ORTHO05D039234 2.0e-56 222.6 131 90.8
BcaC02g10194 Brassica carinata HOM05D003135 ORTHO05D003715 9.9e-56 220.3 131 88.5
BcaC06g34106 Brassica carinata HOM05D000325 ORTHO05D090659 1.9e-51 206.1 124 86.3
BcaC06g33395 Brassica carinata HOM05D000325 ORTHO05D095478 2.4e-46 189.1 113 88.5
C06p29110 Brassica napus HOM05D000325 ORTHO05D000122 1.8e-41 172.9 103 88.3
C01p10060 Brassica napus HOM05D000325 ORTHO05D015252 2.1e-37 159.5 125 75.2
BolC1t00964H Brassica oleracea HOM05D000325 ORTHO05D015252 2.1e-37 159.5 125 75.2
BcaC09g51729 Brassica carinata HOM05D000325 ORTHO05D015252 6.0e-37 157.9 125 74.4
A01p08590 Brassica napus HOM05D000325 ORTHO05D015252 1.9e-35 152.9 126 73.8
BraA01t00810Z Brassica rapa HOM05D000325 ORTHO05D015252 1.9e-35 152.9 126 73.8
C08p03040 Brassica napus HOM05D000325 ORTHO05D000583 1.8e-33 146.4 85 92.9
Sp7g27320 Schrenkiella parvula HOM05D000325 ORTHO05D015252 3.1e-33 145.6 133 63.9
BcaC05g26066 Brassica carinata HOM05D000325 ORTHO05D094652 2.6e-32 142.5 81 93.8
Carub.0007s1110 Capsella rubella HOM05D000325 ORTHO05D015252 1.6e-26 123.2 122 59.8
AL7G22950 Arabidopsis lyrata HOM05D000325 ORTHO05D015252 3.1e-25 119.0 123 58.5
Thhalv10027451m.g Eutrema salsugineum HOM05D000325 ORTHO05D015252 6.5e-23 111.3 137 49.6
AT4G29440 Arabidopsis thaliana HOM05D000325 ORTHO05D015252 2.1e-21 106.3 122 54.9
CARHR237260 Cardamine hirsuta HOM05D000325 ORTHO05D015252 9.0e-17 90.9 124 54.8
Aa31LG2G21000 Aethionema arabicum HOM05D000325 ORTHO05D015252 4.8e-10 68.6 123 42.3
THA.LOC104814600 Tarenaya hassleriana HOM05D000325 ORTHO05D014391 7.2e-06 54.7 114 39.5


User provided reference genes

Program Settings