Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g03293 Brassica carinata HOM05D001713 ORTHO05D001669 1.3e-99 366.3 180 100.0
C03p22010 Brassica napus HOM05D001713 ORTHO05D001669 7.1e-93 344.0 179 94.4
A03p18870 Brassica napus HOM05D001713 ORTHO05D001669 1.6e-92 342.8 179 93.9
BraA03t11147Z Brassica rapa HOM05D001713 ORTHO05D001669 1.6e-92 342.8 179 93.9
BcaC01g05828 Brassica carinata HOM05D001713 ORTHO05D001669 1.8e-91 339.3 179 93.3
BolC3t14584H Brassica oleracea HOM05D001713 ORTHO05D001669 1.1e-90 336.7 179 93.3
C03p54800 Brassica napus HOM05D001713 ORTHO05D001669 9.6e-74 280.4 166 84.9
BcaB01g03921 Brassica carinata HOM05D001713 ORTHO05D001669 4.8e-73 278.1 179 79.9
Sp4g16060 Schrenkiella parvula HOM05D001713 ORTHO05D001669 7.7e-39 164.5 190 49.5
BcaC02g11447 Brassica carinata HOM05D001713 ORTHO05D001669 4.4e-34 148.7 179 48.6
A05p11880 Brassica napus HOM05D001713 ORTHO05D001669 1.3e-33 147.1 179 48.0
BraA05t20129Z Brassica rapa HOM05D001713 ORTHO05D001669 1.3e-33 147.1 179 48.0
BolC4t23116H Brassica oleracea HOM05D001713 ORTHO05D001669 4.8e-33 145.2 179 48.0
Carub.0004s1534 Capsella rubella HOM05D001713 ORTHO05D001669 2.5e-29 132.9 195 42.1
AL5G19040 Arabidopsis lyrata HOM05D001713 ORTHO05D001669 7.2e-29 131.3 192 41.7
AL4G29400 Arabidopsis lyrata HOM05D001713 ORTHO05D001669 4.0e-27 125.6 155 49.0
AT2G33720 Arabidopsis thaliana HOM05D001713 ORTHO05D001669 9.2e-24 114.4 175 42.3
C04p15450 Brassica napus HOM05D001713 ORTHO05D001669 4.5e-23 112.1 152 44.7
Carub.0004s1535 Capsella rubella HOM05D001713 ORTHO05D001669 3.3e-21 105.9 160 41.2
AT1G78640 Arabidopsis thaliana HOM05D001713 ORTHO05D001669 3.9e-14 82.4 120 42.5
Ciclev10006716m.g Citrus clementina HOM05D001713 ORTHO05D001669 5.0e-14 82.0 143 32.9
Cpa.g.sc85.9 Carica papaya HOM05D001713 ORTHO05D001669 3.3e-13 79.3 162 30.9
Ciclev10006773m.g Citrus clementina HOM05D001713 ORTHO05D001669 4.3e-13 79.0 143 32.2
TAR374G0438 Trochodendron aralioides HOM05D001713 ORTHO05D001669 4.3e-13 79.0 95 43.2
Ciclev10006908m.g Citrus clementina HOM05D001713 ORTHO05D001669 9.5e-13 77.8 143 32.2
Cpa.g.sc28.53 Carica papaya HOM05D001713 ORTHO05D001669 6.2e-12 75.1 158 32.3
THA.LOC109116201 Tarenaya hassleriana HOM05D001713 ORTHO05D001669 8.0e-12 74.7 144 36.8
AL2G39040 Arabidopsis lyrata HOM05D001713 ORTHO05D001669 5.2e-11 72.0 127 37.8
Sp5g20590 Schrenkiella parvula HOM05D001713 ORTHO05D001669 5.2e-11 72.0 105 37.1
THA.LOC104815134 Tarenaya hassleriana HOM05D001713 ORTHO05D001669 1.5e-10 70.5 155 32.9
Eucgr.E02050 Eucalyptus grandis HOM05D001713 ORTHO05D001669 3.4e-10 69.3 89 42.7
Eucgr.E02060 Eucalyptus grandis HOM05D001713 ORTHO05D001669 3.4e-10 69.3 89 42.7
Eucgr.L03694 Eucalyptus grandis HOM05D001713 ORTHO05D001669 3.4e-10 69.3 89 42.7
Eucgr.E04371 Eucalyptus grandis HOM05D001713 ORTHO05D001669 4.4e-10 68.9 89 40.4
Eucgr.E04373 Eucalyptus grandis HOM05D001713 ORTHO05D001669 4.4e-10 68.9 89 40.4
Eucgr.E02057 Eucalyptus grandis HOM05D001713 ORTHO05D001669 5.8e-10 68.6 89 41.6
Eucgr.L02104 Eucalyptus grandis HOM05D001713 ORTHO05D001669 5.8e-10 68.6 89 40.4
Eucgr.E02047 Eucalyptus grandis HOM05D001713 ORTHO05D001669 7.5e-10 68.2 89 41.6
Eucgr.E04365 Eucalyptus grandis HOM05D001713 ORTHO05D001669 7.5e-10 68.2 90 42.2
TWI34G0085 Tripterygium wilfordii HOM05D001713 ORTHO05D001669 7.5e-10 68.2 89 39.3
Carub.0002s2549 Capsella rubella HOM05D001713 ORTHO05D001669 9.8e-10 67.8 113 36.3
Eucgr.E02013 Eucalyptus grandis HOM05D001713 ORTHO05D001669 1.3e-09 67.4 108 35.2
Eucgr.E02044 Eucalyptus grandis HOM05D001713 ORTHO05D001669 1.3e-09 67.4 102 40.2
Eucgr.E02045 Eucalyptus grandis HOM05D001713 ORTHO05D001669 1.3e-09 67.4 89 41.6
Eucgr.L01802 Eucalyptus grandis HOM05D001713 ORTHO05D001669 1.3e-09 67.4 89 41.6
Eucgr.E02046 Eucalyptus grandis HOM05D001713 ORTHO05D001669 2.2e-09 66.6 89 39.3
Eucgr.E02053 Eucalyptus grandis HOM05D001713 ORTHO05D001669 2.2e-09 66.6 89 39.3
Eucgr.E02039 Eucalyptus grandis HOM05D001713 ORTHO05D001669 2.9e-09 66.2 89 40.4
Eucgr.E02048 Eucalyptus grandis HOM05D001713 ORTHO05D001669 2.9e-09 66.2 104 37.5
Eucgr.L01801 Eucalyptus grandis HOM05D001713 ORTHO05D001669 4.9e-09 65.5 89 40.4
Eucgr.E02029 Eucalyptus grandis HOM05D001713 ORTHO05D001669 6.4e-09 65.1 104 36.5
BcaB04g21444 Brassica carinata HOM05D001713 ORTHO05D001669 1.1e-08 64.3 89 46.1
Prupe.5G092200 Prunus persica HOM05D001713 ORTHO05D001669 1.1e-08 64.3 151 30.5
Nn4g26398 Nelumbo nucifera HOM05D001713 ORTHO05D001669 1.4e-08 63.9 92 32.6
Atru.chr1.393 Acer truncatum HOM05D001713 ORTHO05D001669 1.9e-08 63.5 90 38.9
CiPaw.11G135200 Carya illinoinensis HOM05D001713 ORTHO05D001669 1.9e-08 63.5 87 40.2
Eucgr.E02051 Eucalyptus grandis HOM05D001713 ORTHO05D001669 1.9e-08 63.5 104 36.5
Nn4g26403 Nelumbo nucifera HOM05D001713 ORTHO05D001669 1.9e-08 63.5 94 31.9
Eucgr.E01941 Eucalyptus grandis HOM05D001713 ORTHO05D001669 2.4e-08 63.2 95 35.8
Lalb_Chr15g0083841 Lupinus albus HOM05D001713 ORTHO05D001669 3.2e-08 62.8 126 32.5
Dinv38941 Davidia involucrata HOM05D001713 ORTHO05D001669 4.1e-08 62.4 92 38.0
Atru.chr1.3164 Acer truncatum HOM05D001713 ORTHO05D001669 5.4e-08 62.0 88 37.5
Eucgr.E01944 Eucalyptus grandis HOM05D001713 ORTHO05D001669 5.4e-08 62.0 98 38.8
Sp7g10240 Schrenkiella parvula HOM05D001713 ORTHO05D001669 5.4e-08 62.0 114 29.8
Atru.chr1.3165 Acer truncatum HOM05D001713 ORTHO05D001669 7.0e-08 61.6 88 37.5
Carub.0003s0487 Capsella rubella HOM05D001713 ORTHO05D001669 7.0e-08 61.6 95 40.0
Eucgr.E01943 Eucalyptus grandis HOM05D001713 ORTHO05D001669 7.0e-08 61.6 98 36.7
Eucgr.E01948 Eucalyptus grandis HOM05D001713 ORTHO05D001669 9.2e-08 61.2 101 37.6
Phvul.009G204600 Phaseolus vulgaris HOM05D001713 ORTHO05D001669 9.2e-08 61.2 128 33.6
Eucgr.E02075 Eucalyptus grandis HOM05D001713 ORTHO05D001669 1.2e-07 60.8 101 36.6
Glyma.06G207800 Glycine max HOM05D001713 ORTHO05D001669 1.2e-07 60.8 100 38.0
Eucgr.E02109 Eucalyptus grandis HOM05D001713 ORTHO05D001669 1.6e-07 60.5 95 36.8
VMungo1309G1291 Vigna mungo HOM05D001713 ORTHO05D001669 1.6e-07 60.5 95 38.9
Eucgr.E02074 Eucalyptus grandis HOM05D001713 ORTHO05D001669 2.0e-07 60.1 101 36.6
QL08p058986 Quercus lobata HOM05D001713 ORTHO05D001669 2.0e-07 60.1 99 39.4
TPR.G39275 Trifolium pratense HOM05D001713 ORTHO05D001669 2.0e-07 60.1 105 35.2
Eucgr.E02078 Eucalyptus grandis HOM05D001713 ORTHO05D001669 2.7e-07 59.7 93 37.6
Thhalv10022244m.g Eutrema salsugineum HOM05D001713 ORTHO05D001669 2.7e-07 59.7 86 44.2
Lj6g0004027 Lotus japonicus HOM05D001713 ORTHO05D001669 2.7e-07 59.7 94 35.1
Thhalv10028286m.g Eutrema salsugineum HOM05D001713 ORTHO05D001669 3.5e-07 59.3 144 34.0
Nn1g01519 Nelumbo nucifera HOM05D001713 ORTHO05D001669 3.5e-07 59.3 93 36.6
QL02p074390 Quercus lobata HOM05D001713 ORTHO05D001669 3.5e-07 59.3 108 35.2
Dinv37640 Davidia involucrata HOM05D001713 ORTHO05D001669 4.6e-07 58.9 143 29.4
Lj5g0002472 Lotus japonicus HOM05D001713 ORTHO05D001669 4.6e-07 58.9 114 33.3
CARHR072160 Cardamine hirsuta HOM05D001713 ORTHO05D001669 6.0e-07 58.5 81 46.9
Lj5g0023689 Lotus japonicus HOM05D001713 ORTHO05D001669 6.0e-07 58.5 92 38.0
QL02p102444 Quercus lobata HOM05D001713 ORTHO05D001669 6.0e-07 58.5 150 32.0
QL02p103065 Quercus lobata HOM05D001713 ORTHO05D001669 6.0e-07 58.5 144 29.2
QL02p103081 Quercus lobata HOM05D001713 ORTHO05D001669 6.0e-07 58.5 144 29.2
Lj3g0017442 Lotus japonicus HOM05D001713 ORTHO05D001669 7.8e-07 58.2 107 29.9
PGR031G3325 Punica granatum HOM05D001713 ORTHO05D001669 7.8e-07 58.2 99 33.3
AL2G39050 Arabidopsis lyrata HOM05D001713 ORTHO05D001669 1.0e-06 57.8 106 37.7
Eucgr.E01938 Eucalyptus grandis HOM05D001713 ORTHO05D001669 1.0e-06 57.8 98 36.7
Glyma.04G143300 Glycine max HOM05D001713 ORTHO05D001669 1.0e-06 57.8 110 33.6
Glyma.04G156400 Glycine max HOM05D001713 ORTHO05D001669 1.0e-06 57.8 129 32.6
Hma1.2p1_2966F.1_g331000 Hydrangea macrophylla HOM05D001713 ORTHO05D001669 1.0e-06 57.8 109 33.0
QL02p102432 Quercus lobata HOM05D001713 ORTHO05D001669 1.0e-06 57.8 145 33.1
TAR374G0415 Trochodendron aralioides HOM05D001713 ORTHO05D001669 1.0e-06 57.8 110 34.5
Nn4g26404 Nelumbo nucifera HOM05D001713 ORTHO05D001669 1.3e-06 57.4 92 31.5
Psat1g027960 Pisum sativum HOM05D001713 ORTHO05D001669 1.3e-06 57.4 96 35.4
Ca_02696_v3 Cicer arietinum L. HOM05D001713 ORTHO05D001669 1.7e-06 57.0 108 34.3
Eucgr.E01947 Eucalyptus grandis HOM05D001713 ORTHO05D001669 1.7e-06 57.0 93 37.6
Thhalv10000676m.g Eutrema salsugineum HOM05D001713 ORTHO05D001669 1.7e-06 57.0 131 31.3
Medtr2g058520 Medicago truncatula HOM05D001713 ORTHO05D001669 1.7e-06 57.0 88 37.5
Potri.004G099600 Populus trichocarpa HOM05D001713 ORTHO05D001669 1.7e-06 57.0 99 36.4
PGR031G2861 Punica granatum HOM05D001713 ORTHO05D001669 1.7e-06 57.0 105 33.3
QL93p0165_0009 Quercus lobata HOM05D001713 ORTHO05D001669 2.3e-06 56.6 91 40.7
Glyma.08G327800 Glycine max HOM05D001713 ORTHO05D001669 3.0e-06 56.2 110 28.2
CiPaw.04G131900 Carya illinoinensis HOM05D001713 ORTHO05D001669 3.9e-06 55.8 81 37.0
TAR374G0219 Trochodendron aralioides HOM05D001713 ORTHO05D001669 3.9e-06 55.8 101 31.7
TAR374G0856 Trochodendron aralioides HOM05D001713 ORTHO05D001669 3.9e-06 55.8 112 33.0
TAR374G1468 Trochodendron aralioides HOM05D001713 ORTHO05D001669 5.0e-06 55.5 101 31.7
TAR374G1627 Trochodendron aralioides HOM05D001713 ORTHO05D001669 5.0e-06 55.5 101 30.7
DCAR_004641 Daucus carota HOM05D001713 ORTHO05D001669 6.6e-06 55.1 111 32.4
Hma1.2p1_2547F.1_g324190 Hydrangea macrophylla HOM05D001713 ORTHO05D001669 6.6e-06 55.1 92 32.6
Hma1.2p1_2547F.1_g324191 Hydrangea macrophylla HOM05D001713 ORTHO05D001669 6.6e-06 55.1 92 32.6
Hma1.2p1_2547F.1_g324193 Hydrangea macrophylla HOM05D001713 ORTHO05D001669 6.6e-06 55.1 92 32.6
AT1G78635 Arabidopsis thaliana HOM05D001713 ORTHO05D001669 8.6e-06 54.7 79 43.0
arahy.Tifrunner.gnm1.ann1.GE1X0Z Arachis hypogaea HOM05D001713 ORTHO05D001669 8.6e-06 54.7 88 37.5
arahy.Tifrunner.gnm1.ann1.PE7EYC Arachis hypogaea HOM05D001713 ORTHO05D001669 8.6e-06 54.7 88 37.5
Haze_09859 Corylus avellana HOM05D003572 ORTHO05D004118 8.6e-06 54.7 136 35.3
Glyma.08G327600 Glycine max HOM05D001713 ORTHO05D001669 8.6e-06 54.7 108 28.7
QL12p032673 Quercus lobata HOM05D001713 ORTHO05D001669 8.6e-06 54.7 89 36.0


User provided reference genes

Program Settings