Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g03153 Brassica carinata HOM05D007498 ORTHO05D009384 5.7e-212 740.7 394 100.0
C03p55520 Brassica napus HOM05D007498 ORTHO05D009384 3.1e-210 734.9 394 99.2
A03p44690 Brassica napus HOM05D007498 ORTHO05D009384 3.8e-208 728.0 394 98.2
BolC3t17828H Brassica oleracea HOM05D000228 ORTHO05D001122 1.9e-207 725.7 407 96.1
BraA03t13603Z Brassica rapa HOM05D007498 ORTHO05D009384 1.4e-205 719.5 407 94.8
BcaB08g34508 Brassica carinata HOM05D007498 ORTHO05D009384 3.7e-203 711.4 394 95.4
Sp3g24210 Schrenkiella parvula HOM05D007498 ORTHO05D009384 5.6e-191 671.0 396 89.9
AT2G05755 Arabidopsis thaliana HOM05D007498 ORTHO05D009384 1.4e-181 639.8 391 84.7
AL3G43270 Arabidopsis lyrata HOM05D007498 ORTHO05D009384 6.8e-181 637.5 391 84.7
Carub.0003s2696 Capsella rubella HOM05D007498 ORTHO05D009384 4.3e-175 618.2 393 82.4
CARHR103340 Cardamine hirsuta HOM05D007498 ORTHO05D009384 2.1e-174 615.9 394 83.5
Aa31LG8G11370 Aethionema arabicum HOM05D007498 ORTHO05D009384 4.7e-166 588.2 392 79.6
Thhalv10002583m.g Eutrema salsugineum HOM05D007498 ORTHO05D009384 9.9e-140 500.7 397 73.8
THA.LOC104815344 Tarenaya hassleriana HOM05D007498 ORTHO05D009384 4.6e-137 491.9 387 69.0
TWI18G0826 Tripterygium wilfordii HOM05D007498 ORTHO05D009384 1.5e-124 450.3 390 63.1
Hma1.2p1_0445F.1_g154420 Hydrangea macrophylla HOM05D007498 ORTHO05D009384 1.9e-122 443.4 367 62.7
Hma1.2p1_2381F.1_g320980 Hydrangea macrophylla HOM05D007498 ORTHO05D009384 2.5e-122 443.0 398 59.8
COL.COLO4_21864 Corchorus olitorius HOM05D007498 ORTHO05D009384 5.5e-122 441.8 364 64.8
Gohir.A07G187000 Gossypium hirsutum HOM05D007498 ORTHO05D009384 3.6e-121 439.1 397 59.7
Dinv08726 Davidia involucrata HOM05D007498 ORTHO05D009384 7.9e-121 438.0 392 60.2
Gorai.001G216600 Gossypium raimondii HOM05D007498 ORTHO05D009384 1.3e-120 437.2 394 60.2
TAR629G3061 Trochodendron aralioides HOM05D007498 ORTHO05D009384 1.3e-120 437.2 376 62.0
Manes.12G070200 Manihot esculenta HOM05D007498 ORTHO05D009384 6.7e-120 434.9 400 59.5
Thecc.01G181300 Theobroma cacao HOM05D007498 ORTHO05D009384 3.3e-119 432.6 389 61.2
CiPaw.03G155900 Carya illinoinensis HOM05D007498 ORTHO05D009384 2.4e-117 426.4 394 59.9
Prupe.3G211200 Prunus persica HOM05D007498 ORTHO05D009384 6.9e-117 424.9 388 58.8
Ciclev10015493m.g Citrus clementina HOM05D007498 ORTHO05D009384 6.5e-115 418.3 364 62.4
GSVIVG01030496001 Vitis vinifera HOM05D007498 ORTHO05D009384 1.4e-114 417.2 399 58.4
QL08p030918 Quercus lobata HOM05D007498 ORTHO05D009384 4.2e-114 415.6 393 60.6
Sabra14G0119400 Salix brachista HOM05D007498 ORTHO05D009384 2.7e-113 412.9 418 57.4
CSS0038240 Camellia sinensis var. sinensis HOM05D007498 ORTHO05D009384 3.6e-113 412.5 366 60.9
Sc21g0001170 Simmondsia chinensis HOM05D007498 ORTHO05D009384 1.0e-112 411.0 380 58.9
Eucgr.A01096 Eucalyptus grandis HOM05D007498 ORTHO05D009384 2.3e-112 409.8 403 57.3
PGR042G1731 Punica granatum HOM05D007498 ORTHO05D009384 5.1e-112 408.7 397 57.9
Actinidia09741 Actinidia chinensis HOM05D007498 ORTHO05D009384 1.1e-111 407.5 372 60.2
RcHm_v2.0_Chr2g0158311 Rosa chinensis HOM05D007498 ORTHO05D009384 3.3e-111 406.0 386 56.7
Actinidia13735 Actinidia chinensis HOM05D007498 ORTHO05D009384 4.4e-111 405.6 372 59.7
Cc05_g03070 Coffea canephora HOM05D007498 ORTHO05D009384 4.4e-111 405.6 377 57.0
CANSAT64G1398 Cannabis sativa HOM05D007498 ORTHO05D009384 1.7e-110 403.7 387 56.8
MD17G1103400 Malus domestica HOM05D007498 ORTHO05D009384 2.2e-110 403.3 389 56.0
Nn1g03383 Nelumbo nucifera HOM05D007498 ORTHO05D009384 1.1e-109 401.0 376 58.5
FAN05G5059 Fragaria x ananassa HOM05D007498 ORTHO05D009384 1.0e-107 394.4 375 56.8
PSO541G2474 Papaver somniferum HOM05D007498 ORTHO05D009384 1.0e-107 394.4 372 59.7
Lj6g0022389 Lotus japonicus HOM05D007498 ORTHO05D009384 5.0e-107 392.1 392 55.9
Rhsim09G0054300 Rhododendron simsii HOM05D007498 ORTHO05D009384 5.0e-107 392.1 419 54.7
Rhsim06G0166900 Rhododendron simsii HOM05D007498 ORTHO05D009384 1.1e-106 391.0 440 53.4
MBI19_g41387_MAGBIO Magnolia biondii HOM05D007498 ORTHO05D009384 1.4e-106 390.6 363 56.7
Aqoxy1G04193 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 3.2e-106 389.4 367 58.0
FvH4_6g42420 Fragaria vesca HOM05D007498 ORTHO05D009384 1.2e-105 387.5 374 56.1
PSO675G1300 Papaver somniferum HOM05D007498 ORTHO05D009384 4.7e-105 385.6 401 56.1
Gorai.001G095600 Gossypium raimondii HOM05D007498 ORTHO05D009384 1.8e-104 383.6 388 55.7
Gohir.D07G193500 Gossypium hirsutum HOM05D007498 ORTHO05D009384 7.4e-103 378.3 314 63.1
vmacro12166 Vaccinium macrocarpon HOM05D007498 ORTHO05D009384 2.2e-102 376.7 453 50.3
TPR.G34497 Trifolium pratense HOM05D007498 ORTHO05D009384 2.8e-102 376.3 396 53.3
Lj1A780G53 Lonicera japonica HOM05D007498 ORTHO05D009384 4.1e-101 372.5 366 54.4
Sopen05g026100 Solanum pennellii HOM05D007498 ORTHO05D009384 7.0e-101 371.7 379 53.8
Medtr3g080260 Medicago truncatula HOM05D007498 ORTHO05D009384 4.5e-100 369.0 404 52.5
Nitab4.5_0006063g0010 Nicotiana tabacum HOM05D007498 ORTHO05D009384 4.5e-100 369.0 389 53.2
Phvul.006G012811 Phaseolus vulgaris HOM05D007498 ORTHO05D009384 4.5e-100 369.0 392 53.8
Solyc05g042050.4 Solanum lycopersicum HOM05D007498 ORTHO05D009384 2.9e-99 366.3 379 53.0
Sed0020195 Sechium edule HOM05D007498 ORTHO05D009384 2.5e-98 363.2 399 51.4
Nitab4.5_0000019g0370 Nicotiana tabacum HOM05D007498 ORTHO05D009384 5.5e-98 362.1 375 53.9
Lsat_1_v5_gn_5_123880 Lactuca sativa HOM05D007498 ORTHO05D009384 1.6e-97 360.5 363 52.1
MD09G1113300 Malus domestica HOM05D007498 ORTHO05D009384 2.1e-97 360.1 329 57.4
Peaxi162Scf00100g01524 Petunia axillaris HOM05D007498 ORTHO05D009384 2.1e-97 360.1 361 54.3
HanXRQChr12g0373631 Helianthus annuus HOM05D007498 ORTHO05D009384 6.1e-97 358.6 389 50.6
Lsat_1_v5_gn_7_95281 Lactuca sativa HOM05D007498 ORTHO05D009384 1.2e-95 354.4 389 51.2
CsaV3_6G037690 Cucumis sativus L. HOM05D007498 ORTHO05D009384 3.3e-95 352.8 391 52.9
ATR0059G023 Amborella trichopoda HOM05D007498 ORTHO05D009384 1.5e-90 337.4 366 53.6
Duzib138G1101 Durio zibethinus HOM05D007498 ORTHO05D009384 5.2e-88 328.9 360 54.2
MELO3C014431.2 Cucumis melo HOM05D007498 ORTHO05D009384 2.3e-83 313.5 427 45.9
ClCG07G002420 Citrullus lanatus HOM05D007498 ORTHO05D009384 6.3e-78 295.4 390 47.9
Gohir.D07G089300 Gossypium hirsutum HOM05D007498 ORTHO05D009384 5.4e-77 292.4 278 57.9
Gohir.A07G083200 Gossypium hirsutum HOM05D007498 ORTHO05D009384 2.9e-75 286.6 278 57.6
FAN09G2551 Fragaria x ananassa HOM05D007498 ORTHO05D009384 8.9e-72 275.0 299 52.8
SEGI_23048 Sequoiadendron giganteum HOM05D007498 ORTHO05D009384 3.4e-71 273.1 354 42.9
Aqoxy1G02942 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 5.8e-71 272.3 249 56.6
ECA234G3795 Erigeron canadensis HOM05D007498 ORTHO05D009384 4.9e-70 269.2 277 52.7
Psat5g106880 Pisum sativum HOM05D007498 ORTHO05D009384 2.4e-69 266.9 279 53.0
Potri.014G157700 Populus trichocarpa HOM05D007498 ORTHO05D009384 3.0e-67 260.0 235 62.1
CDE07G0657 Ceratophyllum demersum HOM05D000323 ORTHO05D009384 7.0e-61 238.8 335 43.6
Ca_16281_v3 Cicer arietinum L. HOM05D007498 ORTHO05D009384 8.1e-57 225.3 395 40.0
AagrBONN_evm.TU.Sc2ySwM_344.4295 Anthoceros agrestis HOM05D007498 ORTHO05D009384 2.7e-52 210.3 385 35.1
DCAR_019260 Daucus carota HOM05D007498 ORTHO05D001133 1.2e-49 201.4 172 58.7
FAN14G0249 Fragaria x ananassa HOM05D007498 ORTHO05D001133 2.1e-49 200.7 375 38.4
MD09G1113200 Malus domestica HOM05D007498 ORTHO05D009384 1.5e-42 177.9 228 45.6
Cpa.g.sc132.15 Carica papaya HOM05D007498 ORTHO05D009384 1.2e-39 168.3 145 63.4
Pp3c17_21590 Physcomitrium patens HOM05D007498 ORTHO05D009384 6.0e-36 156.0 291 32.6
Haze_12773 Corylus avellana HOM05D007498 ORTHO05D009384 1.1e-34 151.8 205 47.3
Mapoly0005s0243 Marchantia polymorpha HOM05D007498 ORTHO05D009384 9.6e-34 148.7 311 31.8
SMO146G0054 Selaginella moellendorffii HOM05D007498 ORTHO05D009384 9.0e-32 142.1 294 33.7
BcaB06g26853 Brassica carinata HOM05D007498 ORTHO05D009384 4.3e-26 123.2 143 55.9
VMungo0540G0169 Vigna mungo HOM05D007498 ORTHO05D009384 1.1e-24 118.6 132 51.5
BcaC01g03152 Brassica carinata HOM05D007498 ORTHO05D009384 1.3e-22 111.7 64 92.2
Atru.chr6.3249 Acer truncatum HOM05D007498 ORTHO05D009384 6.0e-20 102.8 96 56.2
Atru.chr6.3248 Acer truncatum HOM05D007498 ORTHO05D009384 3.0e-19 100.5 70 75.7
Aqoxy1G02941 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 3.5e-12 77.0 102 44.1
VMungo0540G1885 Vigna mungo HOM05D007498 ORTHO05D009384 4.8e-09 66.6 69 56.5
Cre07.g355550 Chlamydomonas reinhardtii HOM05D024201 ORTHO05D009384 8.5e-06 55.8 330 23.0


User provided reference genes

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