Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g03137 Brassica carinata HOM05D004481 ORTHO05D005350 5.2e-72 274.2 136 100.0
C03p55700 Brassica napus HOM05D004481 ORTHO05D005350 5.8e-71 270.8 134 100.0
BolC3t17849H Brassica oleracea HOM05D004481 ORTHO05D005350 3.9e-67 258.1 132 96.2
BcaC08g44162 Brassica carinata HOM05D004481 ORTHO05D005350 2.3e-59 232.3 120 95.0
A01p04140 Brassica napus HOM05D004481 ORTHO05D005350 4.8e-49 198.0 152 69.1
BcaNung04989 Brassica carinata HOM05D004481 ORTHO05D005350 6.2e-49 197.6 152 68.4
C01p04510 Brassica napus HOM05D004481 ORTHO05D005350 1.4e-48 196.4 152 69.1
BolC1t00437H Brassica oleracea HOM05D004481 ORTHO05D005350 1.4e-48 196.4 152 69.1
BraA01t00403Z Brassica rapa HOM05D004481 ORTHO05D005350 1.4e-48 196.4 151 69.5
AT4G34270 Arabidopsis thaliana HOM05D004481 ORTHO05D005350 5.3e-48 194.5 153 67.3
CARHR242510 Cardamine hirsuta HOM05D004481 ORTHO05D005350 9.0e-48 193.7 147 68.7
AL7G17000 Arabidopsis lyrata HOM05D004481 ORTHO05D005350 4.5e-47 191.4 153 66.7
Carub.0007s0609 Capsella rubella HOM05D004481 ORTHO05D005350 1.3e-46 189.9 153 65.4
Sp7g32060 Schrenkiella parvula HOM05D004481 ORTHO05D005350 4.2e-45 184.9 153 64.7
BcaNung04162 Brassica carinata HOM05D004481 ORTHO05D005350 7.1e-45 184.1 93 92.5
THA.LOC104807234 Tarenaya hassleriana HOM05D004481 ORTHO05D005350 1.2e-44 183.3 154 62.3
Thhalv10025895m.g Eutrema salsugineum HOM05D004481 ORTHO05D005350 6.0e-44 181.0 154 64.3
Lalb_Chr21g0308241 Lupinus albus HOM05D004481 ORTHO05D005350 3.9e-43 178.3 152 61.2
Glyma.20G130700 Glycine max HOM05D004481 ORTHO05D005350 6.7e-43 177.6 151 62.3
THA.LOC104819549 Tarenaya hassleriana HOM05D004481 ORTHO05D005350 6.7e-43 177.6 158 60.1
Aa31LG2G16850 Aethionema arabicum HOM05D004481 ORTHO05D005350 8.7e-43 177.2 153 62.1
Ca_11058_v3 Cicer arietinum L. HOM05D004481 ORTHO05D005350 8.7e-43 177.2 152 60.5
VMungo0720G1503 Vigna mungo HOM05D004481 ORTHO05D005350 8.7e-43 177.2 152 61.8
arahy.Tifrunner.gnm1.ann1.5RC8JY Arachis hypogaea HOM05D004481 ORTHO05D005350 1.9e-42 176.0 152 61.2
arahy.Tifrunner.gnm1.ann1.PGW4NS Arachis hypogaea HOM05D004481 ORTHO05D005350 1.9e-42 176.0 152 61.2
Psat6g216600 Pisum sativum HOM05D004481 ORTHO05D005350 1.9e-42 176.0 152 60.5
Lalb_Chr02g0145211 Lupinus albus HOM05D004481 ORTHO05D005350 2.5e-42 175.6 152 59.9
TPR.G27083 Trifolium pratense HOM05D004481 ORTHO05D005350 2.5e-42 175.6 152 60.5
Duzib052G1089 Durio zibethinus HOM05D004481 ORTHO05D005350 3.3e-42 175.3 153 60.1
Phvul.007G041700 Phaseolus vulgaris HOM05D004481 ORTHO05D005350 3.3e-42 175.3 152 61.2
Glyma.10G260500 Glycine max HOM05D004481 ORTHO05D005350 4.3e-42 174.9 154 61.0
Thecc.02G111500 Theobroma cacao HOM05D004481 ORTHO05D005350 4.3e-42 174.9 153 60.1
Cfa004607 Carpinus fangiana HOM05D004481 ORTHO05D005350 7.4e-42 174.1 150 62.0
Lj5g0012751 Lotus japonicus HOM05D004481 ORTHO05D005350 9.6e-42 173.7 152 59.2
QL11p032653 Quercus lobata HOM05D004481 ORTHO05D005350 9.6e-42 173.7 153 60.1
Haze_10202 Corylus avellana HOM05D004481 ORTHO05D005350 1.6e-41 172.9 169 56.2
FAN15G0583 Fragaria x ananassa HOM05D004481 ORTHO05D005350 1.6e-41 172.9 112 73.2
Medtr1g107045 Medicago truncatula HOM05D004481 ORTHO05D005350 1.6e-41 172.9 152 59.2
GSVIVG01037896001 Vitis vinifera HOM05D004481 ORTHO05D005350 1.6e-41 172.9 158 58.2
Gohir.A12G021100 Gossypium hirsutum HOM05D004481 ORTHO05D005350 6.2e-41 171.0 155 60.0
Gohir.D12G021400 Gossypium hirsutum HOM05D004481 ORTHO05D005350 6.2e-41 171.0 155 60.0
Gorai.008G021700 Gossypium raimondii HOM05D004481 ORTHO05D005350 6.2e-41 171.0 155 60.0
Ciclev10028970m.g Citrus clementina HOM05D004481 ORTHO05D005350 1.4e-40 169.9 153 57.5
Sabra09G0071800 Salix brachista HOM05D004481 ORTHO05D005350 1.8e-40 169.5 150 61.3
Cpa.g.sc106.118 Carica papaya HOM05D004481 ORTHO05D005350 3.1e-40 168.7 153 58.2
Migut.B00402 Erythranthe guttata HOM05D004481 ORTHO05D005350 3.1e-40 168.7 151 58.3
Manes.07G066500 Manihot esculenta HOM05D004481 ORTHO05D005350 3.1e-40 168.7 151 59.6
Eucgr.I01088 Eucalyptus grandis HOM05D004481 ORTHO05D005350 4.0e-40 168.3 152 57.2
Sc18g0005550 Simmondsia chinensis HOM05D004481 ORTHO05D005350 5.3e-40 167.9 152 57.9
Nn1g04655 Nelumbo nucifera HOM05D004481 ORTHO05D005350 6.9e-40 167.5 154 58.4
Hund06305 Selenicereus undatus HOM05D004481 ORTHO05D005350 9.0e-40 167.2 152 57.2
Dinv42206 Davidia involucrata HOM05D002228 ORTHO05D005350 1.2e-39 166.8 150 59.3
DCAR_021976 Daucus carota HOM05D004481 ORTHO05D005350 1.5e-39 166.4 152 58.6
TAR376G0836 Trochodendron aralioides HOM05D004481 ORTHO05D005350 2.0e-39 166.0 152 57.9
AUR62010332 Chenopodium quinoa HOM05D004481 ORTHO05D005350 2.6e-39 165.6 152 57.2
Hma1.2p1_1023F.1_g248990 Hydrangea macrophylla HOM05D004481 ORTHO05D005350 2.6e-39 165.6 144 61.1
Potri.009G093200 Populus trichocarpa HOM05D004481 ORTHO05D005350 2.6e-39 165.6 150 60.0
SGA_v2.0_scaffold225G42995 Striga asiatica HOM05D004481 ORTHO05D005350 2.6e-39 165.6 152 57.9
Nitab4.5_0002647g0020 Nicotiana tabacum HOM05D004481 ORTHO05D005350 3.4e-39 165.2 152 55.3
CAN.G606.21 Capsicum annuum HOM05D004481 ORTHO05D005350 4.5e-39 164.9 152 55.9
CiPaw.06G168400 Carya illinoinensis HOM05D004481 ORTHO05D005350 5.8e-39 164.5 151 59.6
PGSC0003DMG400023263 Solanum tuberosum HOM05D004481 ORTHO05D005350 5.8e-39 164.5 152 55.3
MSTRG.20195 Avicennia marina HOM05D004481 ORTHO05D005350 7.6e-39 164.1 152 57.9
Sed0018810 Sechium edule HOM05D004481 ORTHO05D005350 7.6e-39 164.1 152 56.6
TAR628G0287 Trochodendron aralioides HOM05D004481 ORTHO05D005350 7.6e-39 164.1 154 57.1
Atru.chr5.2445 Acer truncatum HOM05D004481 ORTHO05D005350 9.9e-39 163.7 152 57.9
Oeu037260.1 Olea europaea HOM05D004481 ORTHO05D005350 9.9e-39 163.7 144 56.9
Potri.001G298500 Populus trichocarpa HOM05D004481 ORTHO05D005350 9.9e-39 163.7 150 58.7
PGSC0003DMG400025761 Solanum tuberosum HOM05D004481 ORTHO05D005350 9.9e-39 163.7 152 55.9
CANSAT25G2190 Cannabis sativa HOM05D004481 ORTHO05D005350 1.3e-38 163.3 152 56.6
ClCG02G006560 Citrullus lanatus HOM05D004481 ORTHO05D005350 1.3e-38 163.3 152 55.3
Cc02_g19430 Coffea canephora HOM05D004481 ORTHO05D005350 1.3e-38 163.3 150 58.0
ECA234G2632 Erigeron canadensis HOM05D004481 ORTHO05D005350 1.3e-38 163.3 148 57.4
PGR142G4205 Punica granatum HOM05D004481 ORTHO05D005350 1.3e-38 163.3 150 56.0
TWI79G1728 Tripterygium wilfordii HOM05D004481 ORTHO05D005350 1.3e-38 163.3 150 58.0
CANSAT25G3441 Cannabis sativa HOM05D004481 ORTHO05D005350 1.7e-38 162.9 152 56.6
HanXRQChr04g0105981 Helianthus annuus HOM05D004481 ORTHO05D005350 2.2e-38 162.5 148 57.4
Nn5g30459 Nelumbo nucifera HOM05D004481 ORTHO05D005350 2.2e-38 162.5 154 56.5
Lj5A215G63 Lonicera japonica HOM05D004481 ORTHO05D005350 2.9e-38 162.2 157 56.1
Peaxi162Scf00016g02527 Petunia axillaris HOM05D004481 ORTHO05D005350 3.8e-38 161.8 151 55.6
Actinidia27975 Actinidia chinensis HOM05D004481 ORTHO05D005350 4.9e-38 161.4 158 54.4
EL10Ac9g22252 Beta vulgaris HOM05D004481 ORTHO05D005350 4.9e-38 161.4 155 54.8
Solyc10g049850.3 Solanum lycopersicum HOM05D004481 ORTHO05D005350 4.9e-38 161.4 152 54.6
Lsat_1_v5_gn_5_116421 Lactuca sativa HOM05D004481 ORTHO05D005350 1.9e-37 159.5 148 56.1
TWI75G0922 Tripterygium wilfordii HOM05D004481 ORTHO05D005350 1.9e-37 159.5 153 56.9
Hma1.2p1_1023F.1_g249000 Hydrangea macrophylla HOM05D004481 ORTHO05D005350 3.2e-37 158.7 151 57.6
CsaV3_7G008050 Cucumis sativus L. HOM05D004481 ORTHO05D005350 4.2e-37 158.3 152 53.9
Nitab4.5_0001480g0100 Nicotiana tabacum HOM05D004481 ORTHO05D005350 5.5e-37 157.9 152 53.3
PSO210G1902 Papaver somniferum HOM05D004481 ORTHO05D005350 5.5e-37 157.9 152 57.9
ATR0661G316 Amborella trichopoda HOM05D004481 ORTHO05D005350 9.3e-37 157.1 151 55.0
Aqoxy5G01130 Aquilegia oxysepala HOM05D004481 ORTHO05D005350 1.2e-36 156.8 152 57.2
Ah.01g010900 Amaranthus hybridus HOM05D004481 ORTHO05D005350 1.6e-36 156.4 151 55.6
FvH4_2g04780 Fragaria vesca HOM05D004481 ORTHO05D005350 2.1e-36 156.0 150 55.3
FAN24G0473 Fragaria x ananassa HOM05D004481 ORTHO05D005350 2.1e-36 156.0 150 55.3
FAN27G3202 Fragaria x ananassa HOM05D004481 ORTHO05D005350 2.1e-36 156.0 150 55.3
CSS0003948 Camellia sinensis var. sinensis HOM05D004481 ORTHO05D005350 2.7e-36 155.6 153 54.9
MELO3C018500.2 Cucumis melo HOM05D004481 ORTHO05D005350 2.7e-36 155.6 152 54.6
Rhsim11G0157800 Rhododendron simsii HOM05D004481 ORTHO05D005350 2.7e-36 155.6 153 52.9
Nitab4.5_0003699g0050 Nicotiana tabacum HOM05D004481 ORTHO05D005350 6.0e-36 154.5 163 49.7
PSO170G4403 Papaver somniferum HOM05D004481 ORTHO05D005350 6.0e-36 154.5 151 57.6
Prupe.8G137600 Prunus persica HOM05D004481 ORTHO05D005350 7.9e-36 154.1 153 53.6
CSS0013759 Camellia sinensis var. sinensis HOM05D004481 ORTHO05D005350 1.0e-35 153.7 150 54.7
Rhsim11G0156300 Rhododendron simsii HOM05D004481 ORTHO05D005350 1.0e-35 153.7 153 52.3
vmacro01990 Vaccinium macrocarpon HOM05D004481 ORTHO05D005350 1.3e-35 153.3 153 52.3
AUR62039053 Chenopodium quinoa HOM05D004481 ORTHO05D005350 1.8e-35 152.9 93 74.2
unitig_0.g879 Utricularia gibba HOM05D004481 ORTHO05D005350 2.3e-35 152.5 152 52.6
CSS0002878 Camellia sinensis var. sinensis HOM05D004481 ORTHO05D005350 3.0e-35 152.1 153 53.6
CSS0015264 Camellia sinensis var. sinensis HOM05D004481 ORTHO05D005350 3.0e-35 152.1 153 53.6
RcHm_v2.0_Chr6g0254491 Rosa chinensis HOM05D004481 ORTHO05D005350 3.0e-35 152.1 150 55.3
SEGI_10030 Sequoiadendron giganteum HOM05D004481 ORTHO05D005350 8.7e-35 150.6 158 53.2
Sed0023236 Sechium edule HOM05D004481 ORTHO05D005350 1.9e-34 149.4 152 52.6
HPP92_010143 Vanilla planifolia HOM05D004481 ORTHO05D005350 4.3e-34 148.3 143 54.5
CDE02G3699 Ceratophyllum demersum HOM05D004481 ORTHO05D005350 7.4e-34 147.5 159 51.6
MD10G1100100 Malus domestica HOM05D004481 ORTHO05D005350 7.4e-34 147.5 150 52.0
AagrBONN_evm.TU.Sc2ySwM_228.2403 Anthoceros agrestis HOM05D004481 ORTHO05D005350 2.8e-33 145.6 163 50.3
CiPaw.05G013400 Carya illinoinensis HOM05D004481 ORTHO05D005350 2.8e-33 145.6 138 58.0
Mapoly0064s0080 Marchantia polymorpha HOM05D004481 ORTHO05D005350 6.2e-33 144.4 163 48.5
SalBow6G4388 Salvia bowleyana HOM05D004481 ORTHO05D005350 1.4e-32 143.3 192 45.3
SalBow6G4779 Salvia bowleyana HOM05D004481 ORTHO05D005350 1.4e-32 143.3 192 45.3
FAN20G2321 Fragaria x ananassa HOM05D004481 ORTHO05D005350 4.0e-32 141.7 106 65.1
Pp3c10_18670 Physcomitrium patens HOM05D004481 ORTHO05D005350 2.6e-31 139.0 144 49.3
SMO361G0327 Selaginella moellendorffii HOM05D004481 ORTHO05D005350 2.6e-31 139.0 150 50.0
Os03g0760600 Oryza sativa ssp. japonica HOM05D004481 ORTHO05D005350 1.7e-30 136.3 156 46.8
Zm00001eb214380 Zea mays HOM05D004481 ORTHO05D005350 1.1e-29 133.7 89 68.5
SHI05271 Sapria himalayana HOM05D004481 ORTHO05D005350 3.2e-29 132.1 149 49.0
MD00G1108700 Malus domestica HOM05D004481 ORTHO05D005350 3.5e-28 128.6 83 68.7
Actinidia00401 Actinidia chinensis HOM05D004481 ORTHO05D005350 8.7e-27 124.0 168 47.0
CBR_g36716 Chara braunii HOM05D004481 ORTHO05D005350 7.6e-23 110.9 86 57.0
Actinidia34390 Actinidia chinensis HOM05D004481 ORTHO05D005350 1.1e-18 97.1 63 71.4
Hund00159 Selenicereus undatus HOM05D004481 ORTHO05D005350 2.9e-14 82.4 60 61.7
CSS0049178 Camellia sinensis var. sinensis HOM05D002228 ORTHO05D002347 1.4e-11 73.6 71 52.1
CSS0039068 Camellia sinensis var. sinensis HOM05D002228 ORTHO05D002347 3.9e-11 72.0 65 55.4
Lsat_1_v5_gn_5_116621 Lactuca sativa HOM05D000552 ORTHO05D000469 3.3e-10 68.9 40 77.5
Sopen10g019880 Solanum pennellii HOM05D004481 ORTHO05D005350 1.7e-09 66.6 88 44.3
Cre17.g734150 Chlamydomonas reinhardtii HOM05D004481 ORTHO05D005350 4.8e-09 65.1 75 49.3
Cfa024874 Carpinus fangiana HOM05D004481 ORTHO05D005350 5.3e-08 61.6 126 29.4
Sopen01g049660 Solanum pennellii HOM05D004481 ORTHO05D005350 3.4e-07 58.9 37 67.6
Atru.chr3.1909 Acer truncatum HOM05D004481 ORTHO05D005350 1.0e-06 57.4 42 64.3
Atru.chr12.2105 Acer truncatum HOM05D004481 ORTHO05D005350 3.8e-06 55.5 42 64.3
Atru.chr13.2259 Acer truncatum HOM05D004481 ORTHO05D005350 3.8e-06 55.5 42 64.3
Atru.chr7.688 Acer truncatum HOM05D004481 ORTHO05D005350 3.8e-06 55.5 42 64.3
CSS0037652 Camellia sinensis var. sinensis HOM05D004481 ORTHO05D005350 3.8e-06 55.5 98 39.8


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