Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g03102 Brassica carinata HOM05D052258 ORTHO05D039292 2.0e-80 302.4 155 100.0
BolC3t17889H Brassica oleracea HOM05D052258 ORTHO05D039292 2.0e-80 302.4 155 100.0
C03p78990 Brassica napus HOM05D005872 ORTHO05D017612 9.6e-30 134.0 87 83.9
BcaC04g22283 Brassica carinata HOM05D005872 ORTHO05D017612 7.1e-25 117.9 95 70.5
BcaC01g03729 Brassica carinata HOM05D005872 ORTHO05D017612 1.6e-24 116.7 95 69.5
A07p00900 Brassica napus HOM05D005872 ORTHO05D017612 3.9e-23 112.1 110 62.7
C01p40880 Brassica napus HOM05D005872 ORTHO05D017612 7.4e-22 107.8 71 83.1
BolC1t04043H Brassica oleracea HOM05D005872 ORTHO05D017612 7.4e-22 107.8 71 83.1
THA.LOC104808420 Tarenaya hassleriana HOM05D005872 ORTHO05D008133 9.4e-09 64.3 58 60.3
A10p05890 Brassica napus HOM05D005872 ORTHO05D008133 1.6e-08 63.5 59 62.7
BraA10t42851Z Brassica rapa HOM05D005872 ORTHO05D008133 1.6e-08 63.5 59 62.7
Ciclev10028981m.g Citrus clementina HOM05D005872 ORTHO05D008133 1.6e-08 63.5 58 55.2
Thhalv10008395m.g Eutrema salsugineum HOM05D005872 ORTHO05D008133 2.7e-08 62.8 58 58.6
THA.LOC104826298 Tarenaya hassleriana HOM05D005872 ORTHO05D008133 2.7e-08 62.8 58 58.6
C05p05390 Brassica napus HOM05D005872 ORTHO05D008133 1.0e-07 60.8 59 61.0
BolC5t29311H Brassica oleracea HOM05D005872 ORTHO05D008133 1.0e-07 60.8 59 61.0
Sp1g06070 Schrenkiella parvula HOM05D005872 ORTHO05D008133 1.8e-07 60.1 58 55.2
Atru.chr3.4076 Acer truncatum HOM05D005872 ORTHO05D008133 2.3e-07 59.7 58 51.7
CARHR007030 Cardamine hirsuta HOM05D005872 ORTHO05D008133 2.3e-07 59.7 59 57.6
Carub.0001s0662 Capsella rubella HOM05D005872 ORTHO05D008133 3.0e-07 59.3 59 57.6
HanXRQChr01g0011361 Helianthus annuus HOM05D005872 ORTHO05D008133 3.9e-07 58.9 58 53.4
Aa31LG1G6580 Aethionema arabicum HOM05D005872 ORTHO05D008133 5.1e-07 58.5 58 51.7
AT1G07320 Arabidopsis thaliana HOM05D005872 ORTHO05D008133 6.7e-07 58.2 59 55.9
Sc06g0008430 Simmondsia chinensis HOM05D005872 ORTHO05D008133 8.8e-07 57.8 58 53.4
AL1G17470 Arabidopsis lyrata HOM05D005872 ORTHO05D008133 1.5e-06 57.0 59 54.2
ECA248G3182 Erigeron canadensis HOM05D005872 ORTHO05D008133 1.5e-06 57.0 58 53.4
Cfa011659 Carpinus fangiana HOM05D005872 ORTHO05D008133 2.5e-06 56.2 58 55.2
Haze_24262 Corylus avellana HOM05D005872 ORTHO05D008133 2.5e-06 56.2 58 55.2
Dinv14463 Davidia involucrata HOM05D005872 ORTHO05D008133 2.5e-06 56.2 58 51.7
Lsat_1_v5_gn_5_172301 Lactuca sativa HOM05D005872 ORTHO05D008133 2.5e-06 56.2 58 53.4
Hund18857 Selenicereus undatus HOM05D005872 ORTHO05D008133 2.5e-06 56.2 58 50.0
Lj1A141T52 Lonicera japonica HOM05D005872 ORTHO05D008133 4.3e-06 55.5 58 51.7


User provided reference genes

Program Settings