Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g03019 Brassica carinata HOM05D014428 ORTHO05D021653 4.4e-92 341.3 173 100.0
BcaC03g17127 Brassica carinata HOM05D014428 ORTHO05D021653 1.5e-71 273.1 179 81.0
A08p14190 Brassica napus HOM05D014428 ORTHO05D021653 4.6e-65 251.5 185 75.1
BraA08t33413Z Brassica rapa HOM05D014428 ORTHO05D021653 4.6e-65 251.5 185 75.1
BolC1t03286H Brassica oleracea HOM05D014428 ORTHO05D021653 6.0e-65 251.1 185 75.1
BcaC02g09924 Brassica carinata HOM05D014428 ORTHO05D021653 4.5e-60 235.0 168 78.0
C03p57090 Brassica napus HOM05D000313 ORTHO05D000065 3.0e-48 195.7 99 100.0
BolC3t17987H Brassica oleracea HOM05D000313 ORTHO05D000065 3.0e-48 195.7 99 100.0
C03p38530 Brassica napus HOM05D014428 ORTHO05D098667 1.4e-34 150.2 79 96.2
C08p15820 Brassica napus HOM05D014428 ORTHO05D102545 1.6e-33 146.7 79 94.9
C04p35110 Brassica napus HOM05D014428 ORTHO05D040418 4.2e-26 122.1 74 87.8
BolC4t25068H Brassica oleracea HOM05D014428 ORTHO05D040418 4.2e-26 122.1 74 87.8
BcaC07g37395 Brassica carinata HOM05D000313 ORTHO05D000065 1.4e-13 80.5 157 38.9
BolC5t33369H Brassica oleracea HOM05D000313 ORTHO05D000065 2.4e-13 79.7 94 48.9
BolC4t25076H Brassica oleracea HOM05D000313 ORTHO05D000065 4.5e-12 75.5 104 45.2
BolC6t39891H Brassica oleracea HOM05D000313 ORTHO05D000065 4.5e-12 75.5 104 45.2
C02p54700 Brassica napus HOM05D012414 ORTHO05D017664 2.9e-11 72.8 108 44.4
BcaC02g09918 Brassica carinata HOM05D000313 ORTHO05D000065 3.8e-11 72.4 103 45.6
C04p35220 Brassica napus HOM05D000313 ORTHO05D000065 6.5e-11 71.6 93 45.2
BolC3t19902H Brassica oleracea HOM05D000313 ORTHO05D000065 6.5e-11 71.6 95 46.3
BolC2t11531H Brassica oleracea HOM05D012414 ORTHO05D017664 8.5e-11 71.2 108 43.5
A08p20960 Brassica napus HOM05D000313 ORTHO05D000065 3.2e-10 69.3 181 31.5
BcaC03g14145 Brassica carinata HOM05D000313 ORTHO05D000065 7.2e-10 68.2 100 40.0
C05p46420 Brassica napus HOM05D000313 ORTHO05D000065 7.2e-10 68.2 73 46.6
BcaC07g38158 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-09 67.4 93 41.9
C06p11820 Brassica napus HOM05D000313 ORTHO05D024047 2.7e-09 66.2 52 59.6
BcaB04g17117 Brassica carinata HOM05D000313 ORTHO05D000065 4.7e-09 65.5 72 47.2
BcaC06g31618 Brassica carinata HOM05D000313 ORTHO05D000065 4.7e-09 65.5 72 47.2
BcaC06g35487 Brassica carinata HOM05D000313 ORTHO05D000065 4.7e-09 65.5 53 58.5
C07p15520 Brassica napus HOM05D000313 ORTHO05D000065 4.7e-09 65.5 53 58.5
BolC7t42040H Brassica oleracea HOM05D000313 ORTHO05D000065 4.7e-09 65.5 53 58.5
BcaC01g00165 Brassica carinata HOM05D000313 ORTHO05D000065 8.0e-09 64.7 86 47.7
C08p07700 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-08 64.3 40 77.5
BolC8t47617H Brassica oleracea HOM05D000313 ORTHO05D000065 1.0e-08 64.3 40 77.5
BraA05t20559Z Brassica rapa HOM05D000313 ORTHO05D000065 1.0e-08 64.3 73 45.2
BcaC02g09566 Brassica carinata HOM05D000313 ORTHO05D000065 1.4e-08 63.9 100 39.0
BolC3t21647H Brassica oleracea HOM05D000313 ORTHO05D000065 1.4e-08 63.9 53 56.6
A01p17050 Brassica napus HOM05D000313 ORTHO05D000065 2.3e-08 63.2 89 36.0
C05p33640 Brassica napus HOM05D000313 ORTHO05D000065 3.0e-08 62.8 72 43.1
BolC5t32095H Brassica oleracea HOM05D000313 ORTHO05D000065 3.0e-08 62.8 72 43.1
BcaB03g16224 Brassica carinata HOM05D000313 ORTHO05D000065 4.0e-08 62.4 52 55.8
A01p40600 Brassica napus HOM05D000313 ORTHO05D000065 4.0e-08 62.4 73 45.2
BraA01t02560Z Brassica rapa HOM05D000313 ORTHO05D000065 4.0e-08 62.4 73 45.2
BcaB04g16903 Brassica carinata HOM05D000313 ORTHO05D000065 5.2e-08 62.0 52 57.7
BcaC03g17051 Brassica carinata HOM05D000313 ORTHO05D000065 5.2e-08 62.0 61 50.8
BcaC08g43805 Brassica carinata HOM05D000313 ORTHO05D000065 6.8e-08 61.6 45 64.4
BolC8t47660H Brassica oleracea HOM05D000313 ORTHO05D000065 6.8e-08 61.6 82 41.5
A03p61800 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-07 60.8 56 51.8
C01p09560 Brassica napus HOM05D000313 ORTHO05D017664 1.2e-07 60.8 71 47.9
C04p02900 Brassica napus HOM05D000313 ORTHO05D040407 1.5e-07 60.5 57 52.6
BolC1t03842H Brassica oleracea HOM05D000313 ORTHO05D000065 1.5e-07 60.5 52 55.8
BolC4t21930H Brassica oleracea HOM05D000313 ORTHO05D040407 1.5e-07 60.5 57 52.6
BcaC02g08554 Brassica carinata HOM05D000313 ORTHO05D000065 2.0e-07 60.1 72 40.3
A05p08730 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-07 60.1 72 43.1
C05p17990 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-07 60.1 52 53.8
C07p23830 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-07 60.1 81 42.0
A10p12060 Brassica napus HOM05D000313 ORTHO05D000065 2.6e-07 59.7 72 41.7
BolC7t40964H Brassica oleracea HOM05D000313 ORTHO05D000065 2.6e-07 59.7 190 27.4
BraA09t39507Z Brassica rapa HOM05D000313 ORTHO05D000065 2.6e-07 59.7 79 39.2
C01p04300 Brassica napus HOM05D000313 ORTHO05D000065 3.4e-07 59.3 72 40.3
BcaC01g04173 Brassica carinata HOM05D000313 ORTHO05D000065 4.4e-07 58.9 54 51.9
A03p06240 Brassica napus HOM05D000313 ORTHO05D000065 4.4e-07 58.9 56 48.2
A10p14410 Brassica napus HOM05D000313 ORTHO05D000065 4.4e-07 58.9 56 48.2
C01p35750 Brassica napus HOM05D000313 ORTHO05D000065 4.4e-07 58.9 74 44.6
C03p44260 Brassica napus HOM05D000313 ORTHO05D000065 4.4e-07 58.9 54 51.9
BolC3t16695H Brassica oleracea HOM05D000313 ORTHO05D000065 4.4e-07 58.9 54 51.9
BolC7t40545H Brassica oleracea HOM05D000313 ORTHO05D000065 4.4e-07 58.9 46 63.0
BcaB06g27486 Brassica carinata HOM05D000313 ORTHO05D000065 5.7e-07 58.5 62 48.4
A01p33560 Brassica napus HOM05D000313 ORTHO05D000065 5.7e-07 58.5 75 42.7
A09p22770 Brassica napus HOM05D000313 ORTHO05D000065 5.7e-07 58.5 72 38.9
A03p13160 Brassica napus HOM05D000313 ORTHO05D000065 9.8e-07 57.8 72 38.9
A09p23680 Brassica napus HOM05D000313 ORTHO05D000065 9.8e-07 57.8 72 38.9
BraA09t40166Z Brassica rapa HOM05D000313 ORTHO05D000065 9.8e-07 57.8 72 38.9
BcaC05g27737 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-06 57.4 72 38.9
C05p37250 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-06 57.4 72 38.9
BraA01t04033Z Brassica rapa HOM05D000313 ORTHO05D000065 1.7e-06 57.0 221 27.6
A07p16160 Brassica napus HOM05D000313 ORTHO05D000065 2.2e-06 56.6 73 39.7
C01p38920 Brassica napus HOM05D000313 ORTHO05D000065 2.2e-06 56.6 45 60.0
C04p04790 Brassica napus HOM05D000313 ORTHO05D000065 2.2e-06 56.6 52 51.9
C08p08060 Brassica napus HOM05D000313 ORTHO05D000065 2.2e-06 56.6 64 46.9
BolC8t47704H Brassica oleracea HOM05D000313 ORTHO05D000065 2.2e-06 56.6 48 58.3
BraA02t08012Z Brassica rapa HOM05D000313 ORTHO05D000065 2.2e-06 56.6 73 39.7
BcaC02g10698 Brassica carinata HOM05D000313 ORTHO05D000065 2.8e-06 56.2 48 54.2
BcaC02g12357 Brassica carinata HOM05D000313 ORTHO05D000065 2.8e-06 56.2 52 50.0
A09p39400 Brassica napus HOM05D000313 ORTHO05D018550 2.8e-06 56.2 83 42.2
C01p43800 Brassica napus HOM05D000313 ORTHO05D000065 2.8e-06 56.2 73 39.7
C04p26780 Brassica napus HOM05D000313 ORTHO05D000065 2.8e-06 56.2 48 54.2
BolC4t24124H Brassica oleracea HOM05D000313 ORTHO05D000065 2.8e-06 56.2 48 54.2
BolC7t43562H Brassica oleracea HOM05D000313 ORTHO05D000065 2.8e-06 56.2 73 39.7
BcaC06g36731 Brassica carinata HOM05D000313 ORTHO05D000065 3.7e-06 55.8 56 51.8
C03p79730 Brassica napus HOM05D000313 ORTHO05D000065 3.7e-06 55.8 75 41.3
BcaC07g37361 Brassica carinata HOM05D000313 ORTHO05D000065 4.9e-06 55.5 67 47.8
BcaC03g16635 Brassica carinata HOM05D000313 ORTHO05D000065 6.3e-06 55.1 53 47.2
C08p08080 Brassica napus HOM05D000313 ORTHO05D000065 6.3e-06 55.1 68 47.1
BolC3t16353H Brassica oleracea HOM05D000313 ORTHO05D000065 6.3e-06 55.1 57 50.9
BolC8t47661H Brassica oleracea HOM05D000313 ORTHO05D000065 6.3e-06 55.1 68 47.1
C05p30600 Brassica napus HOM05D000313 ORTHO05D000065 8.3e-06 54.7 118 32.2


User provided reference genes

Program Settings