Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g02721 Brassica carinata HOM05D012887 ORTHO05D008511 1.9e-70 269.2 154 100.0
C03p61290 Brassica napus HOM05D012887 ORTHO05D008511 1.9e-70 269.2 154 100.0
BolC3t18390H Brassica oleracea HOM05D012887 ORTHO05D008511 1.9e-70 269.2 154 100.0
BcaB02g09838 Brassica carinata HOM05D012887 ORTHO05D008511 7.3e-54 214.2 142 81.0
BraA06t26102Z Brassica rapa HOM05D012887 ORTHO05D008511 6.0e-48 194.5 156 78.8
A06p31670 Brassica napus HOM05D012887 ORTHO05D008511 1.3e-47 193.4 156 78.2
CARHR278890 Cardamine hirsuta HOM05D012887 ORTHO05D008511 9.5e-46 187.2 164 67.1
AT5G64880 Arabidopsis thaliana HOM05D012887 ORTHO05D008511 6.8e-44 181.0 164 61.6
AL8G42370 Arabidopsis lyrata HOM05D012887 ORTHO05D008511 1.5e-43 179.9 165 62.4
Carub.0008s2571 Capsella rubella HOM05D012887 ORTHO05D008511 1.0e-39 167.2 171 57.9
Sp2g27960 Schrenkiella parvula HOM05D012887 ORTHO05D008511 2.1e-37 159.5 164 59.8
Aa31LG1G17050 Aethionema arabicum HOM05D012887 ORTHO05D008511 1.3e-21 107.1 165 49.7
THA.LOC104799256 Tarenaya hassleriana HOM05D012887 ORTHO05D008511 3.4e-19 99.0 163 46.0
TWI77G0698 Tripterygium wilfordii HOM05D007384 ORTHO05D008511 9.6e-14 80.9 157 35.0
CsaV3_2G017570 Cucumis sativus L. HOM05D007384 ORTHO05D008511 9.9e-11 70.9 159 32.1
Sabra05G0069000 Salix brachista HOM05D007384 ORTHO05D008511 9.9e-11 70.9 156 35.9
Potri.005G083900 Populus trichocarpa HOM05D007384 ORTHO05D008511 2.2e-10 69.7 162 34.0
Thecc.01G112100 Theobroma cacao HOM05D007384 ORTHO05D008511 3.2e-09 65.9 158 35.4
Duzib187G0804 Durio zibethinus HOM05D007384 ORTHO05D008511 7.9e-08 61.2 141 34.0
CANSAT01G1949 Cannabis sativa HOM05D007384 ORTHO05D008511 1.3e-07 60.5 81 38.3
Dinv19495 Davidia involucrata HOM05D007384 ORTHO05D008511 2.3e-07 59.7 156 29.5
FAN23G2853 Fragaria x ananassa HOM05D007384 ORTHO05D008511 2.3e-07 59.7 152 33.6
Duzib147G1655 Durio zibethinus HOM05D007384 ORTHO05D008511 3.0e-07 59.3 102 37.3
Glyma.08G141200 Glycine max HOM05D007384 ORTHO05D008511 3.9e-07 58.9 137 31.4
Lalb_Chr11g0068051 Lupinus albus HOM05D007384 ORTHO05D008511 3.9e-07 58.9 162 32.1
Lalb_Chr12g0203551 Lupinus albus HOM05D007384 ORTHO05D008511 3.9e-07 58.9 155 34.8
Manes.12G142100 Manihot esculenta HOM05D007384 ORTHO05D008511 3.9e-07 58.9 83 44.6
FAN26G2489 Fragaria x ananassa HOM05D007384 ORTHO05D008511 8.7e-07 57.8 153 31.4
Dinv42700 Davidia involucrata HOM05D007384 ORTHO05D008511 1.9e-06 56.6 158 27.8
Potri.007G081700 Populus trichocarpa HOM05D007384 ORTHO05D008511 1.9e-06 56.6 134 32.8
Lj4g0022190 Lotus japonicus HOM05D007384 ORTHO05D008511 2.5e-06 56.2 147 28.6
Lj4g0025402 Lotus japonicus HOM05D007384 ORTHO05D008511 2.5e-06 56.2 147 28.6
FAN19G0612 Fragaria x ananassa HOM05D007384 ORTHO05D008511 4.3e-06 55.5 150 30.7
Duzib187G1860 Durio zibethinus HOM05D007384 ORTHO05D008511 5.6e-06 55.1 146 30.8
Lsat_1_v5_gn_2_65360 Lactuca sativa HOM05D007384 ORTHO05D008511 7.4e-06 54.7 159 29.6
CiPaw.03G134700 Carya illinoinensis HOM05D007384 ORTHO05D008511 9.6e-06 54.3 147 32.0
FvH4_1g22200 Fragaria vesca HOM05D007384 ORTHO05D008511 9.6e-06 54.3 150 30.7
TWI74G0307 Tripterygium wilfordii HOM05D007384 ORTHO05D008511 9.6e-06 54.3 157 29.9


User provided reference genes

Program Settings