Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 4.0e-75 284.6 140 100.0
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 4.0e-75 284.6 140 100.0
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 1.2e-74 283.1 140 99.3
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 1.3e-73 279.6 140 97.1
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 2.9e-73 278.5 140 96.4
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 2.3e-70 268.9 142 93.7
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 2.5e-69 265.4 140 92.9
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 2.5e-69 265.4 142 92.3
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 3.6e-68 261.5 143 90.2
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 3.6e-68 261.5 143 90.2
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 1.8e-67 259.2 143 90.9
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 6.8e-67 257.3 143 89.5
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 6.8e-67 257.3 138 90.6
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 1.3e-65 253.1 140 88.6
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 4.1e-64 248.1 139 88.5
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 4.6e-63 244.6 140 85.0
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 3.0e-62 241.9 134 89.6
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 3.9e-62 241.5 140 82.9
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 3.9e-62 241.5 137 86.1
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 3.6e-52 208.4 138 71.0
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 3.1e-51 205.3 136 69.9
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 1.2e-50 203.4 136 71.3
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 1.5e-50 203.0 134 70.9
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 2.0e-50 202.6 139 70.5
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 4.4e-50 201.4 134 67.9
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 5.8e-50 201.1 138 66.7
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 5.8e-50 201.1 135 66.7
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 5.8e-50 201.1 138 67.4
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 7.6e-50 200.7 138 66.7
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 9.9e-50 200.3 136 70.6
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 9.9e-50 200.3 136 64.7
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 1.7e-49 199.5 139 69.8
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 1.7e-49 199.5 133 69.9
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 2.2e-49 199.1 134 68.7
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 2.2e-49 199.1 136 67.6
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 2.9e-49 198.7 133 68.4
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 2.9e-49 198.7 134 70.1
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 2.9e-49 198.7 136 71.3
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 1.4e-48 196.4 134 68.7
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 1.9e-48 196.1 138 67.4
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 1.9e-48 196.1 136 66.2
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 1.9e-48 196.1 134 65.7
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 2.4e-48 195.7 136 67.6
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 2.4e-48 195.7 135 68.1
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 3.2e-48 195.3 136 64.0
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 4.1e-48 194.9 138 67.4
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 9.2e-48 193.7 133 67.7
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 9.2e-48 193.7 133 67.7
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 9.2e-48 193.7 133 67.7
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 1.2e-47 193.4 138 67.4
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 2.1e-47 192.6 134 67.2
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 2.1e-47 192.6 136 64.7
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 2.7e-47 192.2 137 65.7
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 2.7e-47 192.2 133 68.4
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 3.5e-47 191.8 136 65.4
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 3.5e-47 191.8 136 64.7
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 3.5e-47 191.8 136 66.2
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 3.5e-47 191.8 134 66.4
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 4.6e-47 191.4 138 65.9
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 4.6e-47 191.4 136 62.5
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 1.0e-46 190.3 134 66.4
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 1.0e-46 190.3 133 67.7
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 1.3e-46 189.9 138 65.9
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 1.7e-46 189.5 136 63.2
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 3.0e-46 188.7 136 62.5
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 3.0e-46 188.7 136 66.2
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 3.9e-46 188.3 138 65.2
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 3.9e-46 188.3 139 62.6
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 6.6e-46 187.6 134 66.4
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 8.6e-46 187.2 136 61.8
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 1.1e-45 186.8 135 65.2
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 1.1e-45 186.8 135 65.2
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 1.1e-45 186.8 138 63.0
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 1.9e-45 186.0 134 64.2
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 3.3e-45 185.3 138 60.9
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 5.6e-45 184.5 106 82.1
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 5.6e-45 184.5 136 66.2
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 5.6e-45 184.5 136 67.6
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 5.6e-45 184.5 129 67.4
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 7.3e-45 184.1 136 65.4
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 9.6e-45 183.7 136 61.8
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 1.2e-44 183.3 136 65.4
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 2.1e-44 182.6 138 60.1
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 2.1e-44 182.6 138 60.1
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 2.1e-44 182.6 135 61.5
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 3.6e-44 181.8 134 63.4
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 4.7e-44 181.4 136 64.7
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 8.1e-44 180.6 137 65.0
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 4.0e-43 178.3 138 61.6
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 5.2e-43 177.9 133 61.7
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 2.6e-42 175.6 122 67.2
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 2.6e-42 175.6 122 67.2
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 7.6e-42 174.1 142 59.2
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 1.3e-41 173.3 119 68.1
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 1.7e-41 172.9 117 69.2
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 1.7e-41 172.9 122 66.4
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 2.2e-41 172.6 137 62.0
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 4.9e-41 171.4 117 70.1
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 6.4e-41 171.0 130 60.8
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 6.4e-41 171.0 130 60.8
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 1.9e-40 169.5 117 70.1
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 4.2e-40 168.3 137 61.3
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 4.6e-39 164.9 110 69.1
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 1.7e-38 162.9 136 56.6
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 1.7e-38 162.9 139 56.1
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 1.9e-37 159.5 85 85.9
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 2.5e-37 159.1 117 62.4
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 7.3e-37 157.5 135 57.0
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 6.2e-36 154.5 137 51.8
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 1.4e-35 153.3 104 65.4
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 4.0e-35 151.8 104 65.4
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 6.9e-35 151.0 135 55.6
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 9.0e-35 150.6 136 54.4
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 9.0e-35 150.6 131 55.7
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 1.5e-34 149.8 117 59.8
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 1.4e-32 143.3 113 59.3
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 1.2e-31 140.2 131 52.7
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 3.5e-31 138.7 122 55.7
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 3.9e-30 135.2 109 59.6
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 4.3e-29 131.7 119 52.1
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 9.6e-29 130.6 126 50.8
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 1.6e-28 129.8 114 52.6
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 1.1e-27 127.1 92 67.4
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 1.1e-27 127.1 122 51.6
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 2.6e-26 122.5 95 62.1
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 1.4e-24 116.7 83 61.4
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 7.1e-24 114.4 86 64.0
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 1.9e-21 106.3 120 45.0
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 1.5e-18 96.7 90 51.1
QL12p023442 Quercus lobata HOM05D006058 ORTHO05D007686 1.1e-13 80.5 89 46.1
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 2.8e-12 75.9 60 60.0


User provided reference genes

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