Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g02626 Brassica carinata HOM05D009813 ORTHO05D011936 6.4e-234 813.9 473 100.0
C03p62710 Brassica napus HOM05D009813 ORTHO05D011936 7.5e-227 790.4 496 94.6
BolC3t18527H Brassica oleracea HOM05D009813 ORTHO05D011936 7.8e-216 753.8 481 94.2
A06p30320 Brassica napus HOM05D009813 ORTHO05D011936 2.3e-191 672.5 474 87.3
BraA06t25981Z Brassica rapa HOM05D009813 ORTHO05D011936 2.5e-190 669.1 478 86.2
BcaB02g09735 Brassica carinata HOM05D009813 ORTHO05D011936 8.8e-159 564.3 478 76.8
Sp2g26820 Schrenkiella parvula HOM05D009813 ORTHO05D011936 2.6e-118 429.9 505 65.0
BcaNung04641 Brassica carinata HOM05D009813 ORTHO05D011936 1.9e-108 397.1 503 57.3
BcaC04g23353 Brassica carinata HOM05D009813 ORTHO05D011936 4.6e-107 392.5 491 57.6
BraA09t36490Z Brassica rapa HOM05D009813 ORTHO05D011936 6.2e-104 382.1 491 58.7
A09p08400 Brassica napus HOM05D009813 ORTHO05D011936 4.0e-103 379.4 491 58.5
C09p09510 Brassica napus HOM05D009813 ORTHO05D011936 1.3e-101 374.4 491 56.0
Thhalv10029311m.g Eutrema salsugineum HOM05D009813 ORTHO05D011936 3.6e-96 356.3 501 54.9
BolC4t22734H Brassica oleracea HOM05D009813 ORTHO05D011936 1.3e-93 347.8 442 59.0
BolC9t53863H Brassica oleracea HOM05D009813 ORTHO05D011936 4.0e-87 326.2 532 52.6
AL8G40880 Arabidopsis lyrata HOM05D009813 ORTHO05D011936 6.9e-55 219.2 532 44.2
BolC4t22709H Brassica oleracea HOM05D009813 ORTHO05D011936 4.4e-49 199.9 308 51.6
BolC4t22698H Brassica oleracea HOM05D009813 ORTHO05D011936 8.2e-48 195.7 284 55.6
AT5G63720 Arabidopsis thaliana HOM05D009813 ORTHO05D011936 2.2e-45 187.6 541 39.4
CARHR098770 Cardamine hirsuta HOM05D009813 ORTHO05D011936 2.5e-44 184.1 522 40.0
CARHR277640 Cardamine hirsuta HOM05D009813 ORTHO05D011936 1.6e-43 181.4 530 42.3
Aa31LG1G18120 Aethionema arabicum HOM05D009813 ORTHO05D011936 3.6e-43 180.3 561 38.9
Thhalv10019657m.g Eutrema salsugineum HOM05D009813 ORTHO05D011936 3.1e-39 167.2 486 39.1
Carub.0008s2449 Capsella rubella HOM05D009813 ORTHO05D011936 5.5e-28 129.8 513 37.4
AL8G40940 Arabidopsis lyrata HOM05D009813 ORTHO05D011936 4.4e-17 93.6 250 46.4
THA.LOC104800245 Tarenaya hassleriana HOM05D009813 ORTHO05D011936 2.3e-10 71.2 467 30.8
FAN19G1264 Fragaria x ananassa HOM05D012473 ORTHO05D010844 2.4e-07 61.2 137 46.0


User provided reference genes

Program Settings