Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g02601 Brassica carinata HOM05D004489 ORTHO05D093224 4.2e-36 154.5 95 100.0
BcaC08g45661 Brassica carinata HOM05D004489 ORTHO05D010056 2.5e-28 128.6 87 82.8
BcaC09g51560 Brassica carinata HOM05D004489 ORTHO05D010056 8.0e-27 123.6 92 76.1
C07p01860 Brassica napus HOM05D004489 ORTHO05D010056 8.2e-24 113.6 92 75.0
C02p47420 Brassica napus HOM05D004489 ORTHO05D010056 1.4e-23 112.8 92 76.1
BcaC03g16680 Brassica carinata HOM05D004489 ORTHO05D010056 1.2e-22 109.8 78 78.2
BcaC02g07770 Brassica carinata HOM05D004489 ORTHO05D010056 2.2e-21 105.5 78 75.6
C01p35260 Brassica napus HOM05D004489 ORTHO05D010056 3.2e-20 101.7 88 70.5
C01p27340 Brassica napus HOM05D004489 ORTHO05D010056 1.6e-19 99.4 78 73.1
BcaC07g38382 Brassica carinata HOM05D004489 ORTHO05D010056 8.0e-19 97.1 78 70.5
A01p27750 Brassica napus HOM05D004489 ORTHO05D000199 8.0e-19 97.1 78 71.8
C08p11390 Brassica napus HOM05D004489 ORTHO05D010056 8.0e-19 97.1 78 70.5
BcaC04g20751 Brassica carinata HOM05D004489 ORTHO05D010056 2.3e-18 95.5 78 70.5
A06p23470 Brassica napus HOM05D004489 ORTHO05D010056 2.3e-18 95.5 78 70.5
C09p39590 Brassica napus HOM05D004489 ORTHO05D010056 2.3e-18 95.5 78 70.5
BolC2t08562H Brassica oleracea HOM05D004489 ORTHO05D010056 5.7e-17 90.9 92 66.3
BcaC03g14954 Brassica carinata HOM05D004489 ORTHO05D010056 1.7e-16 89.4 92 65.2
BcaC05g26196 Brassica carinata HOM05D004489 ORTHO05D010056 1.7e-16 89.4 59 81.4
BolC1t03483H Brassica oleracea HOM05D004489 ORTHO05D010056 1.7e-16 89.4 78 67.9
BolC8t47151H Brassica oleracea HOM05D004489 ORTHO05D010056 4.8e-16 87.8 78 66.7
A04p09860 Brassica napus HOM05D004489 ORTHO05D010056 1.8e-15 85.9 87 60.9
BcaC05g29022 Brassica carinata HOM05D004489 ORTHO05D010056 3.1e-15 85.1 78 64.1
C05p52380 Brassica napus HOM05D004489 ORTHO05D010056 3.1e-15 85.1 78 64.1
BcaC01g01829 Brassica carinata HOM05D004489 ORTHO05D010056 3.5e-14 81.6 78 64.1
BcaC04g22095 Brassica carinata HOM05D004489 ORTHO05D000493 3.5e-14 81.6 86 62.8
BolC9t58376H Brassica oleracea HOM05D004489 ORTHO05D018788 3.5e-14 81.6 93 58.1
C01p50400 Brassica napus HOM05D004489 ORTHO05D010056 4.5e-14 81.3 78 61.5
BolC5t31966H Brassica oleracea HOM05D004489 ORTHO05D018788 4.5e-14 81.3 59 74.6
C06p10210 Brassica napus HOM05D004489 ORTHO05D010056 7.7e-14 80.5 93 57.0
A01p28040 Brassica napus HOM05D004489 ORTHO05D018788 2.3e-13 79.0 68 69.1
BcaC02g11524 Brassica carinata HOM05D004489 ORTHO05D010056 5.0e-13 77.8 55 74.5
C07p03810 Brassica napus HOM05D004489 ORTHO05D010056 1.5e-12 76.3 78 59.0
BraA07t28336Z Brassica rapa HOM05D004489 ORTHO05D018788 1.5e-12 76.3 68 67.6
BraA04t16648Z Brassica rapa HOM05D004489 ORTHO05D018788 1.9e-12 75.9 68 66.2
BcaC07g37389 Brassica carinata HOM05D004489 ORTHO05D010056 2.5e-12 75.5 83 57.8
BolC8t47699H Brassica oleracea HOM05D004489 ORTHO05D010056 2.5e-12 75.5 83 57.8
C08p08580 Brassica napus HOM05D004489 ORTHO05D010056 7.2e-12 73.9 83 56.6
BraA05t21099Z Brassica rapa HOM05D004489 ORTHO05D027587 7.2e-12 73.9 83 54.2
BcaC03g17739 Brassica carinata HOM05D004489 ORTHO05D010056 9.5e-12 73.6 48 81.2
C07p01700 Brassica napus HOM05D004489 ORTHO05D010056 9.5e-12 73.6 107 54.2
BcaC06g36060 Brassica carinata HOM05D004489 ORTHO05D092528 1.2e-11 73.2 55 72.7
BolC7t40773H Brassica oleracea HOM05D004489 ORTHO05D010056 2.1e-11 72.4 78 56.4
C08p18050 Brassica napus HOM05D004489 ORTHO05D021897 2.8e-11 72.0 93 51.6
BraA09t38666Z Brassica rapa HOM05D004489 ORTHO05D010056 2.8e-11 72.0 78 59.0
BolC9t55268H Brassica oleracea HOM05D004489 ORTHO05D010056 4.7e-11 71.2 78 57.7
BolC9t55309H Brassica oleracea HOM05D004489 ORTHO05D027587 4.7e-11 71.2 87 51.7
C01p30160 Brassica napus HOM05D004489 ORTHO05D010056 6.1e-11 70.9 78 59.0
C01p35220 Brassica napus HOM05D004489 ORTHO05D010056 8.0e-11 70.5 93 54.8
C05p26780 Brassica napus HOM05D004489 ORTHO05D010056 8.0e-11 70.5 93 54.8
C02p21030 Brassica napus HOM05D004489 ORTHO05D010056 3.0e-10 68.6 93 52.7
C07p01670 Brassica napus HOM05D008277 ORTHO05D018788 3.0e-10 68.6 45 80.0
C07p23290 Brassica napus HOM05D004489 ORTHO05D010056 3.0e-10 68.6 78 56.4
C09p20870 Brassica napus HOM05D004489 ORTHO05D010056 3.0e-10 68.6 78 57.7
BolC9t54984H Brassica oleracea HOM05D004489 ORTHO05D010056 3.0e-10 68.6 78 57.7
BraA02t07746Z Brassica rapa HOM05D004489 ORTHO05D018788 4.0e-10 68.2 68 61.8
C05p22010 Brassica napus HOM05D004489 ORTHO05D010056 6.8e-10 67.4 78 55.1
A05p21780 Brassica napus HOM05D004489 ORTHO05D027587 8.8e-10 67.0 55 63.6
BraA06t25443Z Brassica rapa HOM05D004489 ORTHO05D010056 8.8e-10 67.0 78 56.4
C02p57490 Brassica napus HOM05D004489 ORTHO05D010056 2.6e-09 65.5 78 56.4
C09p34080 Brassica napus HOM05D004489 ORTHO05D010056 4.4e-09 64.7 98 50.0
BcaC04g22067 Brassica carinata HOM05D004489 ORTHO05D027587 9.8e-09 63.5 55 61.8
C09p55140 Brassica napus HOM05D004489 ORTHO05D010056 1.3e-08 63.2 94 52.1
BcaC04g20631 Brassica carinata HOM05D004489 ORTHO05D010056 1.7e-08 62.8 78 52.6
C09p41300 Brassica napus HOM05D004489 ORTHO05D010056 1.7e-08 62.8 78 52.6
BolC6t37769H Brassica oleracea HOM05D004489 ORTHO05D010056 1.7e-08 62.8 78 52.6
BcaNung03342 Brassica carinata HOM05D004489 ORTHO05D010056 3.7e-08 61.6 45 73.3
BolC8t49437H Brassica oleracea HOM05D004489 ORTHO05D021897 4.9e-08 61.2 78 50.0
BcaC01g00378 Brassica carinata HOM05D004489 ORTHO05D010056 1.1e-07 60.1 74 52.7
BcaC01g03828 Brassica carinata HOM05D004489 ORTHO05D010056 1.8e-07 59.3 45 68.9
BcaC07g38503 Brassica carinata HOM05D004489 ORTHO05D010056 3.1e-07 58.5 83 61.4
BolC2t08244H Brassica oleracea HOM05D004489 ORTHO05D010056 3.1e-07 58.5 78 52.6
BcaB01g01214 Brassica carinata HOM05D004489 ORTHO05D000740 1.2e-06 56.6 94 46.8
BcaB04g18048 Brassica carinata HOM05D004489 ORTHO05D091089 1.2e-06 56.6 56 55.4
BcaB02g10531 Brassica carinata HOM05D004489 ORTHO05D094500 2.7e-06 55.5 56 53.6
BcaB02g11425 Brassica carinata HOM05D000888 ORTHO05D000740 3.5e-06 55.1 91 47.3
BcaB07g33397 Brassica carinata HOM05D004489 ORTHO05D000740 3.5e-06 55.1 94 46.8
BolC3t18663H Brassica oleracea HOM05D004489 ORTHO05D010056 3.5e-06 55.1 34 82.4
BolC7t42604H Brassica oleracea HOM05D004489 ORTHO05D010056 3.5e-06 55.1 34 82.4
BolC9t56245H Brassica oleracea HOM05D004489 ORTHO05D010056 4.5e-06 54.7 78 50.0


User provided reference genes

Program Settings