Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g02600 Brassica carinata HOM05D000149 ORTHO05D000076 6.7e-27 123.2 61 100.0
BcaNung05781 Brassica carinata HOM05D000149 ORTHO05D000076 6.7e-27 123.2 61 100.0
BraA07t30982Z Brassica rapa HOM05D000149 ORTHO05D000076 1.3e-19 99.0 67 77.6
BcaB03g15259 Brassica carinata HOM05D000149 ORTHO05D000076 1.9e-18 95.1 65 76.9
BcaB03g15239 Brassica carinata HOM05D000149 ORTHO05D000076 4.3e-18 94.0 67 74.6
C06p40090 Brassica napus HOM05D000149 ORTHO05D000076 7.4e-18 93.2 65 78.5
BraA07t30975Z Brassica rapa HOM05D000149 ORTHO05D000076 7.4e-18 93.2 65 76.9
BcaC08g46115 Brassica carinata HOM05D000149 ORTHO05D000076 1.6e-17 92.0 65 76.9
BcaC08g46142 Brassica carinata HOM05D000149 ORTHO05D000076 1.6e-17 92.0 65 76.9
BcaC08g46146 Brassica carinata HOM05D000149 ORTHO05D000076 1.6e-17 92.0 65 76.9
BcaC08g46113 Brassica carinata HOM05D000149 ORTHO05D000076 3.7e-17 90.9 65 76.9
BcaB03g14929 Brassica carinata HOM05D000149 ORTHO05D000076 4.8e-17 90.5 65 75.4
A07p33490 Brassica napus HOM05D000149 ORTHO05D000076 4.8e-17 90.5 65 73.8
Thhalv10018785m.g Eutrema salsugineum HOM05D000149 ORTHO05D000076 4.8e-17 90.5 66 69.7
BcaC08g46102 Brassica carinata HOM05D000149 ORTHO05D000076 1.8e-16 88.6 51 86.3
C06p39880 Brassica napus HOM05D000149 ORTHO05D000076 1.8e-16 88.6 51 86.3
BolC6t39078H Brassica oleracea HOM05D000149 ORTHO05D000076 2.4e-16 88.2 51 86.3
Sp5g21670 Schrenkiella parvula HOM05D000149 ORTHO05D000076 3.1e-16 87.8 65 70.8
AT1G66700 Arabidopsis thaliana HOM05D000149 ORTHO05D000076 9.0e-16 86.3 51 80.4
AT1G66690 Arabidopsis thaliana HOM05D000149 ORTHO05D000076 4.5e-15 84.0 65 66.2
AL2G24650 Arabidopsis lyrata HOM05D000149 ORTHO05D000076 5.9e-15 83.6 65 67.7
Thhalv10019552m.g Eutrema salsugineum HOM05D000149 ORTHO05D000076 5.9e-15 83.6 51 78.4
Carub.0002s1292 Capsella rubella HOM05D000149 ORTHO05D000076 2.2e-14 81.6 51 74.5
Carub.0002s1289 Capsella rubella HOM05D000149 ORTHO05D000076 6.5e-14 80.1 51 72.5
AT1G66720 Arabidopsis thaliana HOM05D000149 ORTHO05D000076 3.2e-13 77.8 51 72.5
Thhalv10018781m.g Eutrema salsugineum HOM05D000149 ORTHO05D000076 3.2e-13 77.8 51 72.5
AL2G24840 Arabidopsis lyrata HOM05D000149 ORTHO05D000076 4.2e-13 77.4 51 68.6
Carub.0002s1294 Capsella rubella HOM05D000149 ORTHO05D000076 5.1e-11 70.5 59 59.3
BcaB05g24183 Brassica carinata HOM05D000149 ORTHO05D000076 4.4e-10 67.4 49 63.3
BcaC03g14752 Brassica carinata HOM05D000149 ORTHO05D000076 4.4e-10 67.4 49 63.3
BcaC03g14753 Brassica carinata HOM05D000149 ORTHO05D000076 4.4e-10 67.4 49 63.3
BcaC03g14754 Brassica carinata HOM05D000149 ORTHO05D000076 4.4e-10 67.4 49 63.3
C02p22050 Brassica napus HOM05D000149 ORTHO05D000076 4.4e-10 67.4 49 63.3
C02p22060 Brassica napus HOM05D000149 ORTHO05D000076 4.4e-10 67.4 49 63.3
C02p22070 Brassica napus HOM05D000149 ORTHO05D000076 4.4e-10 67.4 49 63.3
BolC2t08336H Brassica oleracea HOM05D000149 ORTHO05D000076 4.4e-10 67.4 49 63.3
BolC2t08337H Brassica oleracea HOM05D000149 ORTHO05D000076 4.4e-10 67.4 49 63.3
Sp5g21630 Schrenkiella parvula HOM05D000149 ORTHO05D000076 4.4e-10 67.4 49 61.2
A02p13690 Brassica napus HOM05D000149 ORTHO05D000076 9.7e-10 66.2 49 61.2
BraA02t06427Z Brassica rapa HOM05D000149 ORTHO05D000076 9.7e-10 66.2 49 61.2
BolC2t08339H Brassica oleracea HOM05D000149 ORTHO05D000076 1.7e-09 65.5 49 61.2
BcaB05g24187 Brassica carinata HOM05D000149 ORTHO05D000076 6.3e-09 63.5 49 59.2
BcaB05g24190 Brassica carinata HOM05D000149 ORTHO05D000076 6.3e-09 63.5 49 59.2
BcaB03g15240 Brassica carinata HOM05D000149 ORTHO05D000076 8.2e-09 63.2 65 58.5
BcaC03g14756 Brassica carinata HOM05D000149 ORTHO05D000076 1.1e-08 62.8 49 59.2
BcaB05g24185 Brassica carinata HOM05D000149 ORTHO05D000076 9.1e-08 59.7 49 57.1
BcaB08g35083 Brassica carinata HOM05D000149 ORTHO05D000076 7.7e-07 56.6 48 56.2
CARHR151170 Cardamine hirsuta HOM05D000149 ORTHO05D000076 7.7e-07 56.6 64 45.3
Carub.0005s1061 Capsella rubella HOM05D000149 ORTHO05D000076 2.9e-06 54.7 51 51.0
AT3G44840 Arabidopsis thaliana HOM05D000149 ORTHO05D000076 5.0e-06 53.9 57 45.6
A09p57470 Brassica napus HOM05D000149 ORTHO05D000076 5.0e-06 53.9 48 52.1
BraA09t41138Z Brassica rapa HOM05D000149 ORTHO05D000076 5.0e-06 53.9 48 52.1
Aa31LG2G3190 Aethionema arabicum HOM05D000149 ORTHO05D000076 6.5e-06 53.5 65 43.1
AT3G44870 Arabidopsis thaliana HOM05D000149 ORTHO05D000076 8.5e-06 53.1 58 50.0
Sp5g21690 Schrenkiella parvula HOM05D000149 ORTHO05D000076 8.5e-06 53.1 50 50.0


User provided reference genes

Program Settings