Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g02494 Brassica carinata HOM05D009173 ORTHO05D000309 1.0e-90 336.7 162 100.0
BcaC06g34813 Brassica carinata HOM05D009173 ORTHO05D000309 2.4e-63 245.7 162 80.2
BcaC01g02366 Brassica carinata HOM05D009173 ORTHO05D000309 1.3e-58 229.9 165 67.9
BolC3t18879H Brassica oleracea HOM05D009173 ORTHO05D000309 1.3e-58 229.9 165 67.9
BcaC02g08062 Brassica carinata HOM05D009173 ORTHO05D000309 1.8e-50 203.0 103 98.1
BcaC07g38082 Brassica carinata HOM05D009173 ORTHO05D000309 2.0e-46 189.5 178 56.2
BcaB03g15391 Brassica carinata HOM05D009173 ORTHO05D000309 3.4e-46 188.7 167 59.9
BraA09t38926Z Brassica rapa HOM05D009173 ORTHO05D000309 3.3e-41 172.2 153 56.9
Sp5g12640 Schrenkiella parvula HOM05D009173 ORTHO05D000309 2.0e-38 162.9 156 51.3
Sp5g10600 Schrenkiella parvula HOM05D009173 ORTHO05D000309 1.0e-37 160.6 160 50.0
BcaC04g23317 Brassica carinata HOM05D009173 ORTHO05D000309 5.0e-37 158.3 142 56.3
Sp5g18110 Schrenkiella parvula HOM05D009173 ORTHO05D000309 6.5e-37 157.9 158 48.7
BcaC08g43001 Brassica carinata HOM05D009173 ORTHO05D000309 7.9e-35 151.0 163 48.5
BolC7t41302H Brassica oleracea HOM05D009173 ORTHO05D000309 1.0e-29 134.0 161 46.6
BcaC08g43767 Brassica carinata HOM05D009173 ORTHO05D000309 3.6e-27 125.6 159 43.4
BcaC01g02038 Brassica carinata HOM05D009173 ORTHO05D000309 3.3e-25 119.0 144 43.8
BolC3t19182H Brassica oleracea HOM05D009173 ORTHO05D000309 3.3e-25 119.0 144 43.8
Sp4g02170 Schrenkiella parvula HOM05D009173 ORTHO05D000309 7.2e-20 101.3 162 39.5
Sp3g28210 Schrenkiella parvula HOM05D009173 ORTHO05D000309 2.1e-19 99.8 156 39.1
AL6G38890 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 1.4e-18 97.1 146 36.3
AL4G18060 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 2.3e-18 96.3 168 36.9
AL1G56990 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 4.0e-18 95.5 167 38.9
BcaB01g00830 Brassica carinata HOM05D008073 ORTHO05D000309 8.8e-18 94.4 160 36.2
AL3G40990 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 2.0e-17 93.2 145 40.0
AL6G49470 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 2.0e-17 93.2 145 40.0
C09p37560 Brassica napus HOM05D008073 ORTHO05D000309 4.4e-17 92.0 168 35.1
AL5G24470 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 9.8e-17 90.9 171 35.1
BcaC04g20956 Brassica carinata HOM05D008073 ORTHO05D000309 1.3e-16 90.5 76 52.6
BolC9t56587H Brassica oleracea HOM05D008073 ORTHO05D000309 1.3e-16 90.5 76 52.6
BcaC02g10427 Brassica carinata HOM05D007774 ORTHO05D000309 6.3e-16 88.2 112 45.5
C06p11380 Brassica napus HOM05D009173 ORTHO05D027589 6.3e-16 88.2 82 46.3
BcaB04g19293 Brassica carinata HOM05D008073 ORTHO05D000309 1.1e-15 87.4 159 35.2
BolC6t36277H Brassica oleracea HOM05D009173 ORTHO05D027589 1.4e-15 87.0 135 34.8
BcaC06g36173 Brassica carinata HOM05D007774 ORTHO05D000309 3.1e-15 85.9 99 44.4
BcaB02g11517 Brassica carinata HOM05D007774 ORTHO05D000309 9.1e-15 84.3 93 44.1
BcaB06g26508 Brassica carinata HOM05D007774 ORTHO05D000309 9.1e-15 84.3 102 43.1
BcaB06g26754 Brassica carinata HOM05D007774 ORTHO05D000309 9.1e-15 84.3 93 44.1
BcaB06g27138 Brassica carinata HOM05D007774 ORTHO05D000309 9.1e-15 84.3 93 44.1
BcaC08g43835 Brassica carinata HOM05D007774 ORTHO05D000309 9.1e-15 84.3 94 44.7
BcaB01g01569 Brassica carinata HOM05D009173 ORTHO05D000309 2.7e-14 82.8 78 46.2
BcaB02g11205 Brassica carinata HOM05D007774 ORTHO05D000309 2.7e-14 82.8 93 43.0
BcaB06g26683 Brassica carinata HOM05D007774 ORTHO05D000309 2.7e-14 82.8 93 43.0
BcaB02g11463 Brassica carinata HOM05D001224 ORTHO05D000309 3.5e-14 82.4 94 43.6
AL2G19320 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 4.5e-14 82.0 73 50.7
BcaB07g33163 Brassica carinata HOM05D012943 ORTHO05D027589 4.5e-14 82.0 90 43.3
BcaC08g43129 Brassica carinata HOM05D012943 ORTHO05D039056 4.5e-14 82.0 143 35.0
BcaB05g24508 Brassica carinata HOM05D001224 ORTHO05D000309 1.0e-13 80.9 93 44.1
BcaC06g34090 Brassica carinata HOM05D007774 ORTHO05D000309 1.3e-13 80.5 97 41.2
BcaC02g09596 Brassica carinata HOM05D007774 ORTHO05D000309 2.2e-13 79.7 82 46.3
C06p04030 Brassica napus HOM05D012943 ORTHO05D039056 2.2e-13 79.7 67 50.7
BcaB06g26646 Brassica carinata HOM05D007774 ORTHO05D000309 5.0e-13 78.6 93 43.0
BcaB06g27901 Brassica carinata HOM05D007774 ORTHO05D000309 5.0e-13 78.6 85 45.9
BolC2t09377H Brassica oleracea HOM05D007774 ORTHO05D000309 5.0e-13 78.6 85 43.5
BolC4t24443H Brassica oleracea HOM05D007774 ORTHO05D000309 5.0e-13 78.6 112 42.9
BcaB01g02010 Brassica carinata HOM05D007774 ORTHO05D000309 6.5e-13 78.2 85 45.9
BcaC01g02929 Brassica carinata HOM05D007774 ORTHO05D000309 6.5e-13 78.2 94 42.6
BcaC05g26851 Brassica carinata HOM05D007774 ORTHO05D000309 6.5e-13 78.2 78 46.2
BcaNung05585 Brassica carinata HOM05D007774 ORTHO05D000309 6.5e-13 78.2 85 45.9
BcaB08g35933 Brassica carinata HOM05D007774 ORTHO05D000309 8.5e-13 77.8 103 41.7
BcaB05g23793 Brassica carinata HOM05D007774 ORTHO05D000309 1.5e-12 77.0 110 37.3
EL10Ac2g03965 Beta vulgaris HOM05D008388 ORTHO05D000309 1.9e-12 76.6 82 39.0
BcaB03g16006 Brassica carinata HOM05D007774 ORTHO05D000309 1.9e-12 76.6 117 34.2
BcaB07g33982 Brassica carinata HOM05D007774 ORTHO05D000309 1.9e-12 76.6 103 39.8
BcaB01g00804 Brassica carinata HOM05D009173 ORTHO05D000309 2.5e-12 76.3 67 55.2
BcaB03g15638 Brassica carinata HOM05D008073 ORTHO05D000309 2.5e-12 76.3 164 34.8
EL10Ac7g16399 Beta vulgaris HOM05D008388 ORTHO05D000309 3.2e-12 75.9 117 33.3
BcaB06g27418 Brassica carinata HOM05D007774 ORTHO05D000309 3.2e-12 75.9 83 47.0
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 3.2e-12 75.9 84 41.7
BcaB07g33250 Brassica carinata HOM05D007774 ORTHO05D000309 4.2e-12 75.5 85 44.7
BcaB02g11208 Brassica carinata HOM05D007774 ORTHO05D000309 5.5e-12 75.1 93 40.9
C07p15530 Brassica napus HOM05D008073 ORTHO05D000309 7.2e-12 74.7 164 31.1
BcaB01g02175 Brassica carinata HOM05D007774 ORTHO05D000309 9.5e-12 74.3 85 43.5
BcaC03g17928 Brassica carinata HOM05D008073 ORTHO05D000309 9.5e-12 74.3 166 33.7
BcaC06g35486 Brassica carinata HOM05D008073 ORTHO05D000309 9.5e-12 74.3 164 31.7
BolC7t43639H Brassica oleracea HOM05D008073 ORTHO05D000309 9.5e-12 74.3 161 32.9
BcaC06g36281 Brassica carinata HOM05D008073 ORTHO05D000309 1.2e-11 73.9 149 31.5
EL10As8g23853 Beta vulgaris HOM05D008388 ORTHO05D000309 1.6e-11 73.6 82 39.0
BcaB02g11020 Brassica carinata HOM05D007774 ORTHO05D000309 1.6e-11 73.6 98 36.7
BcaB06g26191 Brassica carinata HOM05D007774 ORTHO05D000309 1.6e-11 73.6 103 40.8
BolC3t19468H Brassica oleracea HOM05D008073 ORTHO05D000309 1.6e-11 73.6 160 31.9
BcaC04g20915 Brassica carinata HOM05D007774 ORTHO05D000309 2.1e-11 73.2 104 34.6
BcaC08g45193 Brassica carinata HOM05D007774 ORTHO05D000309 2.1e-11 73.2 105 41.0
BraA02t08177Z Brassica rapa HOM05D007774 ORTHO05D000309 2.1e-11 73.2 103 39.8
BcaB03g16083 Brassica carinata HOM05D007774 ORTHO05D000309 2.7e-11 72.8 85 43.5
EL10Ac2g03745 Beta vulgaris HOM05D008388 ORTHO05D000309 3.6e-11 72.4 118 31.4
BcaC06g36745 Brassica carinata HOM05D008073 ORTHO05D031794 3.6e-11 72.4 148 30.4
BcaB06g27506 Brassica carinata HOM05D007774 ORTHO05D000309 6.1e-11 71.6 96 41.7
BraA09t41073Z Brassica rapa HOM05D007774 ORTHO05D000309 6.1e-11 71.6 109 36.7
BcaB05g25086 Brassica carinata HOM05D008073 ORTHO05D000309 8.0e-11 71.2 166 30.1
BcaNung03185 Brassica carinata HOM05D007774 ORTHO05D000309 1.0e-10 70.9 97 39.2
BolC6t36100H Brassica oleracea HOM05D007774 ORTHO05D000309 1.0e-10 70.9 85 42.4
BcaC05g25280 Brassica carinata HOM05D008073 ORTHO05D000309 1.4e-10 70.5 121 36.4
BcaC09g50115 Brassica carinata HOM05D008073 ORTHO05D000309 1.4e-10 70.5 163 33.1
BcaC02g10529 Brassica carinata HOM05D007774 ORTHO05D000309 1.8e-10 70.1 103 38.8
Sp5g18570 Schrenkiella parvula HOM05D009173 ORTHO05D000309 1.8e-10 70.1 91 42.9
BcaB06g26984 Brassica carinata HOM05D008073 ORTHO05D000309 2.3e-10 69.7 167 29.9
BcaC04g22268 Brassica carinata HOM05D007774 ORTHO05D000309 3.0e-10 69.3 104 33.7
BolC6t37988H Brassica oleracea HOM05D007774 ORTHO05D000309 3.0e-10 69.3 92 42.4
BcaB05g22492 Brassica carinata HOM05D007774 ORTHO05D000309 4.0e-10 68.9 104 34.6
BcaB05g22493 Brassica carinata HOM05D007774 ORTHO05D000309 4.0e-10 68.9 104 34.6
BcaC01g01743 Brassica carinata HOM05D007774 ORTHO05D000309 4.0e-10 68.9 85 41.2
A01p38280 Brassica napus HOM05D001038 ORTHO05D000395 4.0e-10 68.9 90 38.9
A07p31530 Brassica napus HOM05D008073 ORTHO05D000309 4.0e-10 68.9 167 28.7
EL10Ac2g03864 Beta vulgaris HOM05D000060 ORTHO05D000309 6.8e-10 68.2 83 36.1
BcaC03g14649 Brassica carinata HOM05D008073 ORTHO05D000309 6.8e-10 68.2 156 28.2
C09p37880 Brassica napus HOM05D001038 ORTHO05D000395 8.8e-10 67.8 97 39.2
BolC9t56621H Brassica oleracea HOM05D001038 ORTHO05D000395 8.8e-10 67.8 97 39.2
BcaC04g20923 Brassica carinata HOM05D007774 ORTHO05D000395 1.2e-09 67.4 97 39.2
A04p08080 Brassica napus HOM05D008073 ORTHO05D000309 1.2e-09 67.4 154 31.8
BraA04t16496Z Brassica rapa HOM05D008073 ORTHO05D000309 1.2e-09 67.4 154 31.8
BcaC04g20065 Brassica carinata HOM05D008073 ORTHO05D000309 1.5e-09 67.0 157 31.8
A01p24520 Brassica napus HOM05D008073 ORTHO05D000309 1.5e-09 67.0 166 31.9
BcaC07g37763 Brassica carinata HOM05D008073 ORTHO05D000309 2.0e-09 66.6 94 40.4
BolC3t19075H Brassica oleracea HOM05D007774 ORTHO05D000309 2.0e-09 66.6 104 33.7
BolC8t48149H Brassica oleracea HOM05D008073 ORTHO05D000309 2.0e-09 66.6 94 40.4
BcaB02g10845 Brassica carinata HOM05D008073 ORTHO05D000309 2.6e-09 66.2 163 28.2
BcaB04g16980 Brassica carinata HOM05D007774 ORTHO05D000309 3.4e-09 65.9 93 38.7
CARHR292260 Cardamine hirsuta HOM05D008073 ORTHO05D000309 3.4e-09 65.9 111 29.7
BolC7t41165H Brassica oleracea HOM05D007774 ORTHO05D000309 4.4e-09 65.5 102 36.3
AL8G21820 Arabidopsis lyrata HOM05D007774 ORTHO05D000309 5.7e-09 65.1 97 32.0
C07p07480 Brassica napus HOM05D001038 ORTHO05D000395 5.7e-09 65.1 99 36.4
BcaC01g02160 Brassica carinata HOM05D008073 ORTHO05D000309 7.5e-09 64.7 93 36.6
BcaC06g36128 Brassica carinata HOM05D007774 ORTHO05D000395 7.5e-09 64.7 99 36.4
A05p13640 Brassica napus HOM05D008073 ORTHO05D000309 7.5e-09 64.7 77 40.3
C03p68050 Brassica napus HOM05D008073 ORTHO05D000309 7.5e-09 64.7 93 36.6
BolC7t41880H Brassica oleracea HOM05D008073 ORTHO05D000309 7.5e-09 64.7 83 39.8
AL3G46750 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 9.8e-09 64.3 101 38.6
BcaC04g20561 Brassica carinata HOM05D008073 ORTHO05D000309 9.8e-09 64.3 153 32.0
C09p42090 Brassica napus HOM05D008073 ORTHO05D000309 9.8e-09 64.3 143 32.2
BolC1t03302H Brassica oleracea HOM05D008073 ORTHO05D000309 9.8e-09 64.3 132 29.5
BcaB06g28129 Brassica carinata HOM05D008073 ORTHO05D000309 1.7e-08 63.5 160 26.2
BcaB06g28160 Brassica carinata HOM05D008073 ORTHO05D000309 1.7e-08 63.5 96 38.5
AT1G52603 Arabidopsis thaliana HOM05D008073 ORTHO05D000309 2.2e-08 63.2 75 38.7
AT1G67235 Arabidopsis thaliana HOM05D008073 ORTHO05D000309 2.2e-08 63.2 164 28.7
C09p42360 Brassica napus HOM05D008073 ORTHO05D000309 2.2e-08 63.2 79 35.4
BolC9t57115H Brassica oleracea HOM05D008073 ORTHO05D000309 2.2e-08 63.2 79 35.4
BcaB08g35546 Brassica carinata HOM05D007774 ORTHO05D000309 2.8e-08 62.8 91 37.4
BcaB03g16062 Brassica carinata HOM05D008073 ORTHO05D000309 3.7e-08 62.4 97 36.1
BcaB05g24221 Brassica carinata HOM05D007774 ORTHO05D000309 4.9e-08 62.0 77 46.8
CARHR102990 Cardamine hirsuta HOM05D009173 ORTHO05D000309 6.3e-08 61.6 93 34.4
arahy.Tifrunner.gnm1.ann1.DG6XDV Arachis hypogaea HOM05D029393 ORTHO05D000309 8.3e-08 61.2 139 28.8
arahy.Tifrunner.gnm1.ann1.QSEK4V Arachis hypogaea HOM05D029393 ORTHO05D000309 8.3e-08 61.2 139 28.8
BcaNung00231 Brassica carinata HOM05D008073 ORTHO05D000309 1.1e-07 60.8 159 28.3
BcaB05g24067 Brassica carinata HOM05D008073 ORTHO05D031741 1.4e-07 60.5 158 29.1
BcaB02g11157 Brassica carinata HOM05D008073 ORTHO05D000309 2.4e-07 59.7 156 28.8
BcaB05g23917 Brassica carinata HOM05D007774 ORTHO05D000309 2.4e-07 59.7 97 32.0
BcaNung00469 Brassica carinata HOM05D008073 ORTHO05D000309 3.1e-07 59.3 85 38.8
C07p05860 Brassica napus HOM05D001957 ORTHO05D002015 4.1e-07 58.9 129 31.8
CARHR115250 Cardamine hirsuta HOM05D009173 ORTHO05D000309 4.1e-07 58.9 43 65.1
BcaB08g36585 Brassica carinata HOM05D007774 ORTHO05D000309 5.4e-07 58.5 101 34.7
EL10Ac7g16617 Beta vulgaris HOM05D008388 ORTHO05D000309 7.0e-07 58.2 140 26.4
ECA233G5726 Erigeron canadensis HOM05D012511 ORTHO05D013076 7.0e-07 58.2 104 29.8
EL10Ac8g18741 Beta vulgaris HOM05D008388 ORTHO05D000309 1.2e-06 57.4 140 26.4
BolC3t20228H Brassica oleracea HOM05D007774 ORTHO05D000309 1.2e-06 57.4 46 56.5
BcaB02g11187 Brassica carinata HOM05D007774 ORTHO05D000309 1.6e-06 57.0 40 65.0
Lsat_1_v5_gn_3_138160 Lactuca sativa HOM05D009585 ORTHO05D000309 1.6e-06 57.0 101 33.7
AT5G33393 Arabidopsis thaliana HOM05D008073 ORTHO05D081038 2.0e-06 56.6 81 37.0
EL10Ac5g12256 Beta vulgaris HOM05D008388 ORTHO05D000309 2.0e-06 56.6 138 29.7
A02p37000 Brassica napus HOM05D008073 ORTHO05D000309 2.0e-06 56.6 168 28.6
BraA02t08687Z Brassica rapa HOM05D008073 ORTHO05D000309 2.0e-06 56.6 168 28.6
Medtr8g070590 Medicago truncatula HOM05D001383 ORTHO05D000309 2.0e-06 56.6 89 38.2
Peaxi162Scf01138g00111 Petunia axillaris HOM05D004040 ORTHO05D000309 2.0e-06 56.6 53 47.2
BcaB08g36370 Brassica carinata HOM05D008073 ORTHO05D000309 3.5e-06 55.8 150 29.3
Lsat_1_v5_gn_4_135900 Lactuca sativa HOM05D009585 ORTHO05D000309 3.5e-06 55.8 100 34.0
Peaxi162Scf00043g00065 Petunia axillaris HOM05D004040 ORTHO05D000309 3.5e-06 55.8 79 38.0
EL10Ac9g22366 Beta vulgaris HOM05D008388 ORTHO05D000309 5.9e-06 55.1 143 25.2
BcaB02g11450 Brassica carinata HOM05D007774 ORTHO05D000309 5.9e-06 55.1 104 37.5
BraA02t07615Z Brassica rapa HOM05D007774 ORTHO05D000309 7.7e-06 54.7 90 35.6
Glyma.01G130300 Glycine max HOM05D001383 ORTHO05D000309 7.7e-06 54.7 87 40.2
Nitab4.5_0004598g0010 Nicotiana tabacum HOM05D001883 ORTHO05D002184 7.7e-06 54.7 99 32.3
Peaxi162Scf00274g00613 Petunia axillaris HOM05D004040 ORTHO05D000309 7.7e-06 54.7 89 34.8
Peaxi162Scf00677g00029 Petunia axillaris HOM05D004040 ORTHO05D000309 7.7e-06 54.7 89 34.8


User provided reference genes

Program Settings