Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g02336 Brassica carinata HOM05D003835 ORTHO05D004930 4.2e-83 311.2 148 100.0
BcaC05g27891 Brassica carinata HOM05D003835 ORTHO05D004930 3.7e-71 271.6 147 87.1
BcaC04g20623 Brassica carinata HOM05D003835 ORTHO05D004930 1.1e-67 260.0 147 85.7
BcaC04g20843 Brassica carinata HOM05D003835 ORTHO05D004930 1.8e-65 252.7 147 83.7
BcaC04g20891 Brassica carinata HOM05D003835 ORTHO05D004930 3.9e-65 251.5 147 83.7
BcaC04g20991 Brassica carinata HOM05D003835 ORTHO05D004930 1.3e-63 246.5 147 82.3
BcaC04g20985 Brassica carinata HOM05D003835 ORTHO05D004930 4.1e-62 241.5 147 81.6
BolC4t24052H Brassica oleracea HOM05D003835 ORTHO05D004930 2.0e-61 239.2 147 81.0
BcaC02g10813 Brassica carinata HOM05D003835 ORTHO05D004930 8.5e-60 233.8 147 77.6
BolC8t47793H Brassica oleracea HOM05D003835 ORTHO05D004930 8.2e-55 217.2 117 86.3
BcaC04g20857 Brassica carinata HOM05D003835 ORTHO05D004930 6.5e-52 207.6 147 72.1
BcaC04g20805 Brassica carinata HOM05D003835 ORTHO05D004930 8.0e-50 200.7 101 92.1
BolC8t47785H Brassica oleracea HOM05D003835 ORTHO05D004930 3.4e-48 195.3 119 78.2
BcaC03g16533 Brassica carinata HOM05D003835 ORTHO05D004930 7.5e-48 194.1 137 73.0
BcaC07g37471 Brassica carinata HOM05D003835 ORTHO05D004930 6.3e-47 191.0 119 75.6
BcaNung05987 Brassica carinata HOM05D003835 ORTHO05D004930 9.1e-46 187.2 147 67.3
BcaC04g20889 Brassica carinata HOM05D003835 ORTHO05D004930 1.2e-45 186.8 101 87.1
BcaC09g49664 Brassica carinata HOM05D003835 ORTHO05D004930 1.2e-45 186.8 101 88.1
BcaC06g36783 Brassica carinata HOM05D003835 ORTHO05D004930 1.6e-45 186.4 107 83.2
BcaC07g37476 Brassica carinata HOM05D003835 ORTHO05D004930 1.3e-44 183.3 101 86.1
BcaC02g10560 Brassica carinata HOM05D003835 ORTHO05D004930 2.9e-44 182.2 139 61.2
BolC8t50199H Brassica oleracea HOM05D003835 ORTHO05D004930 8.6e-44 180.6 147 61.2
BcaC03g16671 Brassica carinata HOM05D003835 ORTHO05D004930 1.9e-43 179.5 138 63.8
BcaC01g02043 Brassica carinata HOM05D003835 ORTHO05D004930 4.2e-43 178.3 147 62.6
BcaC03g17353 Brassica carinata HOM05D003835 ORTHO05D004930 5.5e-43 177.9 147 59.9
BcaC03g16677 Brassica carinata HOM05D003835 ORTHO05D004930 7.2e-43 177.6 101 83.2
BolC2t10319H Brassica oleracea HOM05D003835 ORTHO05D004930 1.2e-42 176.8 98 85.7
BcaC01g01952 Brassica carinata HOM05D003835 ORTHO05D004930 1.6e-42 176.4 147 59.2
BcaC08g43746 Brassica carinata HOM05D003835 ORTHO05D004930 3.6e-42 175.3 101 81.2
BcaC07g39533 Brassica carinata HOM05D003835 ORTHO05D004930 4.7e-42 174.9 147 59.9
BcaC07g37248 Brassica carinata HOM05D003835 ORTHO05D004930 8.0e-42 174.1 97 83.5
BcaC05g27589 Brassica carinata HOM05D003835 ORTHO05D004930 1.0e-41 173.7 147 58.5
BcaC09g49753 Brassica carinata HOM05D003835 ORTHO05D004930 1.0e-41 173.7 101 82.2
BcaB01g01376 Brassica carinata HOM05D003835 ORTHO05D004930 6.8e-41 171.0 147 57.8
BraA05t21182Z Brassica rapa HOM05D003835 ORTHO05D004930 9.8e-40 167.2 147 57.1
BcaC06g35990 Brassica carinata HOM05D003835 ORTHO05D004930 2.2e-39 166.0 101 78.2
BcaB01g01339 Brassica carinata HOM05D003835 ORTHO05D004930 3.7e-39 165.2 147 56.5
BcaC03g16471 Brassica carinata HOM05D003835 ORTHO05D004930 6.3e-39 164.5 107 76.6
BcaC01g02120 Brassica carinata HOM05D003835 ORTHO05D004930 1.4e-38 163.3 138 60.9
BcaC01g02227 Brassica carinata HOM05D003835 ORTHO05D004930 1.8e-38 162.9 100 78.0
BcaB05g23456 Brassica carinata HOM05D003835 ORTHO05D004930 7.8e-37 157.5 140 56.4
BcaB01g01286 Brassica carinata HOM05D003835 ORTHO05D004930 2.3e-36 156.0 148 56.8
BcaC06g36790 Brassica carinata HOM05D003835 ORTHO05D004930 2.3e-36 156.0 147 60.5
BcaB05g23025 Brassica carinata HOM05D003835 ORTHO05D004930 2.5e-35 152.5 136 55.1
BcaC02g10605 Brassica carinata HOM05D003835 ORTHO05D004930 2.5e-35 152.5 94 78.7
BcaB07g33106 Brassica carinata HOM05D003835 ORTHO05D004930 2.1e-34 149.4 147 52.4
BcaC02g10387 Brassica carinata HOM05D003835 ORTHO05D004930 2.3e-33 146.0 85 80.0
BcaC06g36461 Brassica carinata HOM05D003835 ORTHO05D004930 2.3e-33 146.0 113 59.3
BcaC07g37593 Brassica carinata HOM05D003835 ORTHO05D004930 1.2e-32 143.7 76 90.8
BcaC06g35964 Brassica carinata HOM05D003835 ORTHO05D004930 3.4e-32 142.1 128 56.2
BcaC01g02153 Brassica carinata HOM05D003835 ORTHO05D004930 5.8e-32 141.4 147 53.1
BcaC05g27575 Brassica carinata HOM05D003835 ORTHO05D004930 9.8e-32 140.6 74 90.5
BcaB06g26909 Brassica carinata HOM05D003835 ORTHO05D004930 6.4e-31 137.9 147 50.3
BcaC09g49627 Brassica carinata HOM05D003835 ORTHO05D004930 8.3e-31 137.5 85 78.8
BcaC06g35918 Brassica carinata HOM05D003835 ORTHO05D004930 1.4e-30 136.7 85 77.6
BcaC06g36022 Brassica carinata HOM05D003835 ORTHO05D004930 3.2e-30 135.6 74 87.8
BcaC05g27887 Brassica carinata HOM05D003835 ORTHO05D004930 3.5e-29 132.1 74 85.1
BcaC01g02195 Brassica carinata HOM05D003835 ORTHO05D004930 1.7e-28 129.8 76 80.3
BcaC03g16445 Brassica carinata HOM05D003835 ORTHO05D004930 8.6e-28 127.5 74 82.4
BcaC05g27823 Brassica carinata HOM05D003835 ORTHO05D004930 1.9e-27 126.3 68 88.2
BcaC06g36120 Brassica carinata HOM05D003835 ORTHO05D004930 1.2e-26 123.6 76 81.6
BcaC03g16230 Brassica carinata HOM05D003835 ORTHO05D004930 4.7e-26 121.7 66 87.9
BcaC05g28695 Brassica carinata HOM05D003835 ORTHO05D004930 6.2e-26 121.3 147 46.9
BcaC05g28698 Brassica carinata HOM05D003835 ORTHO05D004930 6.2e-26 121.3 77 76.6
BcaC06g36053 Brassica carinata HOM05D003835 ORTHO05D004930 2.0e-24 116.3 72 77.8
BcaC03g16196 Brassica carinata HOM05D003835 ORTHO05D004930 5.8e-24 114.8 101 56.4
BcaC05g27890 Brassica carinata HOM05D003835 ORTHO05D004930 4.6e-21 105.1 57 84.2
BcaC06g35829 Brassica carinata HOM05D003835 ORTHO05D004930 3.9e-20 102.1 91 59.3
BcaB08g35260 Brassica carinata HOM05D003835 ORTHO05D004930 1.6e-18 96.7 79 60.8
BcaC01g02168 Brassica carinata HOM05D003835 ORTHO05D004930 2.1e-18 96.3 74 63.5
BcaC04g20888 Brassica carinata HOM05D003835 ORTHO05D004930 4.7e-18 95.1 60 80.0
BcaC03g16676 Brassica carinata HOM05D003835 ORTHO05D004930 1.4e-17 93.6 83 57.8
BcaC03g16787 Brassica carinata HOM05D003835 ORTHO05D004930 5.2e-17 91.7 83 56.6
BcaC02g10732 Brassica carinata HOM05D003835 ORTHO05D004930 2.0e-16 89.7 56 76.8
BcaC01g02117 Brassica carinata HOM05D003835 ORTHO05D004930 4.4e-16 88.6 81 55.6
BolC4t24276H Brassica oleracea HOM05D003835 ORTHO05D004930 7.5e-16 87.8 76 56.6
BcaB02g11288 Brassica carinata HOM05D003835 ORTHO05D004930 1.3e-15 87.0 84 54.8
BcaC03g16405 Brassica carinata HOM05D003835 ORTHO05D004930 1.7e-15 86.7 84 53.6
BcaC09g49552 Brassica carinata HOM05D003835 ORTHO05D004930 3.2e-14 82.4 43 88.4
BolC3t19072H Brassica oleracea HOM05D003835 ORTHO05D004930 4.1e-14 82.0 52 75.0
BcaC03g16553 Brassica carinata HOM05D003835 ORTHO05D004930 5.4e-14 81.6 84 52.4
BraA05t21344Z Brassica rapa HOM05D003835 ORTHO05D004930 5.4e-14 81.6 46 78.3
Carub.0008s0643 Capsella rubella HOM05D003835 ORTHO05D004930 2.1e-13 79.7 88 43.2
BcaB06g26790 Brassica carinata HOM05D003835 ORTHO05D004930 3.5e-13 79.0 86 45.3
BraA08t32792Z Brassica rapa HOM05D003835 ORTHO05D004930 3.5e-13 79.0 84 51.2
BcaC09g49698 Brassica carinata HOM05D003835 ORTHO05D004930 7.8e-13 77.8 45 73.3
BcaC03g16198 Brassica carinata HOM05D003835 ORTHO05D004930 1.3e-12 77.0 87 43.7
CANSAT54G2560 Cannabis sativa HOM05D012521 ORTHO05D011451 1.3e-12 77.0 92 43.5
BcaC04g20902 Brassica carinata HOM05D003835 ORTHO05D004930 3.0e-12 75.9 68 58.8
BraA03t15672Z Brassica rapa HOM05D003835 ORTHO05D004930 3.0e-12 75.9 73 52.1
BcaC03g16557 Brassica carinata HOM05D007458 ORTHO05D009533 3.9e-12 75.5 87 42.5
BraA08t32793Z Brassica rapa HOM05D007458 ORTHO05D009533 3.9e-12 75.5 88 43.2
BcaC02g10775 Brassica carinata HOM05D003835 ORTHO05D004930 6.6e-12 74.7 80 52.5
CANSAT25G0896 Cannabis sativa HOM05D012521 ORTHO05D011451 8.6e-12 74.3 92 42.4
BcaC08g44357 Brassica carinata HOM05D003835 ORTHO05D004930 1.1e-11 73.9 87 41.4
BcaC07g37517 Brassica carinata HOM05D003835 ORTHO05D004930 1.5e-11 73.6 46 71.7
BcaC09g48541 Brassica carinata HOM05D003835 ORTHO05D004930 3.3e-11 72.4 87 41.4
AL4G20670 Arabidopsis lyrata HOM05D003835 ORTHO05D004930 2.1e-10 69.7 85 38.8
BcaC03g16751 Brassica carinata HOM05D003835 ORTHO05D004930 3.6e-10 68.9 93 38.7
BolC6t37236H Brassica oleracea HOM05D003835 ORTHO05D004930 4.7e-10 68.6 45 73.3
BcaC03g14834 Brassica carinata HOM05D003835 ORTHO05D004930 1.1e-09 67.4 87 39.1
BcaC06g35162 Brassica carinata HOM05D003835 ORTHO05D004930 1.1e-09 67.4 87 36.8
BolC2t11376H Brassica oleracea HOM05D003835 ORTHO05D004930 1.8e-09 66.6 87 37.9
CANSAT35G1012 Cannabis sativa HOM05D027150 ORTHO05D028423 4.0e-09 65.5 86 40.7
TWI14G0077 Tripterygium wilfordii HOM05D015010 ORTHO05D000116 2.6e-08 62.8 113 33.6
BcaC05g28699 Brassica carinata HOM05D007458 ORTHO05D009533 3.4e-08 62.4 70 48.6
BcaC09g49670 Brassica carinata HOM05D003835 ORTHO05D004930 3.4e-08 62.4 80 48.8
BcaB06g26993 Brassica carinata HOM05D007458 ORTHO05D009533 5.8e-08 61.6 81 39.5
CANSAT54G1078 Cannabis sativa HOM05D012521 ORTHO05D011451 5.8e-08 61.6 92 35.9
BcaB03g16388 Brassica carinata HOM05D003835 ORTHO05D004930 1.7e-07 60.1 87 40.2
CANSAT35G0823 Cannabis sativa HOM05D014149 ORTHO05D004930 2.2e-07 59.7 86 38.4
CSS0043108 Camellia sinensis var. sinensis HOM05D035337 ORTHO05D012209 4.9e-07 58.5 77 37.7
BcaC07g37516 Brassica carinata HOM05D003835 ORTHO05D004930 1.9e-06 56.6 48 60.4
Cpa.g.sc94.47 Carica papaya HOM05D004287 ORTHO05D004569 2.4e-06 56.2 82 35.4
BcaB03g16145 Brassica carinata HOM05D007458 ORTHO05D009533 3.2e-06 55.8 92 35.9
BolC3t19107H Brassica oleracea HOM05D003835 ORTHO05D004930 7.1e-06 54.7 38 63.2
BolC9t56683H Brassica oleracea HOM05D007458 ORTHO05D009533 9.2e-06 54.3 104 34.6


User provided reference genes

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