Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g02317 Brassica carinata HOM05D007986 ORTHO05D013025 1.2e-95 353.2 179 100.0
BolC5t31599H Brassica oleracea HOM05D007986 ORTHO05D013025 3.4e-71 271.9 188 77.7
BcaC01g01954 Brassica carinata HOM05D007986 ORTHO05D013025 2.1e-68 262.7 174 79.3
BcaC05g27018 Brassica carinata HOM05D007986 ORTHO05D013025 2.0e-63 246.1 173 76.3
BcaC06g36023 Brassica carinata HOM05D007986 ORTHO05D013025 1.4e-61 240.0 163 77.9
BcaC01g02169 Brassica carinata HOM05D007986 ORTHO05D013025 2.5e-61 239.2 173 74.6
BcaC07g37466 Brassica carinata HOM05D007986 ORTHO05D013025 1.3e-59 233.4 174 71.8
BolC3t19085H Brassica oleracea HOM05D007986 ORTHO05D013025 1.8e-59 233.0 169 75.7
BcaC01g02257 Brassica carinata HOM05D007986 ORTHO05D013025 1.6e-57 226.5 174 69.0
BcaC03g16529 Brassica carinata HOM05D007986 ORTHO05D013025 6.5e-54 214.5 159 71.1
BcaC06g36020 Brassica carinata HOM05D007986 ORTHO05D013025 2.5e-53 212.6 174 69.0
BraA06t25658Z Brassica rapa HOM05D007986 ORTHO05D013025 2.2e-46 189.5 135 77.8
BolC1t03331H Brassica oleracea HOM05D007986 ORTHO05D013025 3.6e-44 182.2 175 60.6
BolC2t10396H Brassica oleracea HOM05D007986 ORTHO05D020000 3.0e-43 179.1 135 72.6
BcaC07g37592 Brassica carinata HOM05D007986 ORTHO05D013025 2.4e-40 169.5 164 62.2
BraA05t21054Z Brassica rapa HOM05D007986 ORTHO05D003268 3.7e-33 145.6 130 60.8
BcaC07g37662 Brassica carinata HOM05D007986 ORTHO05D013025 8.5e-30 134.4 71 93.0
BcaC06g35914 Brassica carinata HOM05D007986 ORTHO05D003268 8.5e-22 107.8 59 84.7
BolC8t47944H Brassica oleracea HOM05D007986 ORTHO05D013025 1.9e-21 106.7 87 70.1
BcaC08g42955 Brassica carinata HOM05D003421 ORTHO05D003268 4.0e-19 99.0 188 34.0
BcaB01g01120 Brassica carinata HOM05D007986 ORTHO05D013025 1.5e-18 97.1 115 47.8
BcaC09g49543 Brassica carinata HOM05D007986 ORTHO05D020000 2.0e-18 96.7 110 50.9
BcaC03g16782 Brassica carinata HOM05D007986 ORTHO05D093188 9.8e-18 94.4 65 66.2
BolC9t56013H Brassica oleracea HOM05D003421 ORTHO05D003268 3.7e-17 92.4 186 34.4
BolC8t48271H Brassica oleracea HOM05D003421 ORTHO05D003268 8.3e-17 91.3 186 34.9
BolC8t47709H Brassica oleracea HOM05D003421 ORTHO05D003268 1.8e-16 90.1 189 35.4
BraA09t38708Z Brassica rapa HOM05D003421 ORTHO05D027538 3.1e-16 89.4 181 37.0
BolC7t42918H Brassica oleracea HOM05D003421 ORTHO05D003268 2.0e-15 86.7 186 33.3
BcaC04g20769 Brassica carinata HOM05D007986 ORTHO05D092772 4.5e-15 85.5 65 61.5
BcaC04g20965 Brassica carinata HOM05D003421 ORTHO05D039050 5.9e-15 85.1 191 33.5
BcaC02g10713 Brassica carinata HOM05D007986 ORTHO05D091328 2.9e-14 82.8 67 62.7
BcaC09g49544 Brassica carinata HOM05D007986 ORTHO05D090804 2.9e-14 82.8 57 63.2
BcaC09g49750 Brassica carinata HOM05D007986 ORTHO05D094061 2.9e-14 82.8 57 70.2
BolC3t19083H Brassica oleracea HOM05D007986 ORTHO05D003268 2.9e-14 82.8 56 78.6
BcaC02g09696 Brassica carinata HOM05D007986 ORTHO05D092688 8.5e-14 81.3 59 59.3
BolC2t09439H Brassica oleracea HOM05D003421 ORTHO05D003268 8.5e-14 81.3 186 31.7
BolC2t10337H Brassica oleracea HOM05D003421 ORTHO05D027538 8.5e-14 81.3 171 32.2
BcaC09g49635 Brassica carinata HOM05D003421 ORTHO05D003268 1.1e-13 80.9 148 34.5
C05p39000 Brassica napus HOM05D007986 ORTHO05D020000 1.9e-13 80.1 167 36.5
BolC5t32638H Brassica oleracea HOM05D007986 ORTHO05D020000 2.5e-13 79.7 167 36.5
BcaC05g27892 Brassica carinata HOM05D007986 ORTHO05D020000 3.2e-13 79.3 69 66.7
BcaB03g16541 Brassica carinata HOM05D007986 ORTHO05D003268 5.5e-13 78.6 62 59.7
BcaC01g02234 Brassica carinata HOM05D007986 ORTHO05D094915 1.2e-12 77.4 65 53.8
BcaC04g20882 Brassica carinata HOM05D007986 ORTHO05D095371 1.2e-12 77.4 57 57.9
BcaC09g49549 Brassica carinata HOM05D007986 ORTHO05D020000 2.1e-12 76.6 86 52.3
BcaC09g49548 Brassica carinata HOM05D007986 ORTHO05D090641 3.6e-12 75.9 57 63.2
BcaB03g16511 Brassica carinata HOM05D003421 ORTHO05D003268 1.8e-11 73.6 181 28.7
BolC2t09874H Brassica oleracea HOM05D003421 ORTHO05D003268 1.8e-11 73.6 184 33.2
BolC5t31957H Brassica oleracea HOM05D003421 ORTHO05D003268 1.2e-10 70.9 168 32.1
BolC7t42082H Brassica oleracea HOM05D003421 ORTHO05D003268 2.6e-10 69.7 181 34.3
BolC9t55761H Brassica oleracea HOM05D007986 ORTHO05D003268 5.7e-10 68.6 68 55.9
BolC4t24629H Brassica oleracea HOM05D003421 ORTHO05D003268 9.8e-10 67.8 176 32.4
BolC7t41564H Brassica oleracea HOM05D003421 ORTHO05D027538 9.8e-10 67.8 103 36.9
BolC3t19358H Brassica oleracea HOM05D003421 ORTHO05D003268 2.2e-09 66.6 159 34.0
BcaC06g36481 Brassica carinata HOM05D003421 ORTHO05D003268 6.3e-09 65.1 111 36.0
BraA02t07804Z Brassica rapa HOM05D007986 ORTHO05D019931 1.1e-08 64.3 66 51.5
BolC8t47449H Brassica oleracea HOM05D003421 ORTHO05D039050 1.4e-08 63.9 119 35.3
BcaC05g27711 Brassica carinata HOM05D007986 ORTHO05D013025 1.2e-07 60.8 45 82.2
BcaC07g37580 Brassica carinata HOM05D003421 ORTHO05D003268 2.0e-07 60.1 106 35.8
BcaB08g35489 Brassica carinata HOM05D007986 ORTHO05D020000 1.3e-06 57.4 39 76.9
BolC8t48090H Brassica oleracea HOM05D007986 ORTHO05D013025 2.3e-06 56.6 74 43.2
BcaC04g20964 Brassica carinata HOM05D003421 ORTHO05D003268 2.9e-06 56.2 111 35.1


User provided reference genes

Program Settings