Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g02313 Brassica carinata HOM05D013399 ORTHO05D004009 5.3e-27 124.0 82 100.0
BolC3t18939H Brassica oleracea HOM05D013399 ORTHO05D004009 5.3e-27 124.0 82 100.0
BraA06t25683Z Brassica rapa HOM05D013399 ORTHO05D004009 1.1e-24 116.3 82 92.7
A06p27440 Brassica napus HOM05D013399 ORTHO05D004009 4.2e-24 114.4 82 91.5
C03p66710 Brassica napus HOM05D013399 ORTHO05D004009 3.7e-20 101.3 72 100.0
BcaB02g10669 Brassica carinata HOM05D013399 ORTHO05D019752 2.0e-18 95.5 82 78.0
Thhalv10010873m.g Eutrema salsugineum HOM05D003533 ORTHO05D004009 4.6e-15 84.3 79 62.0
Carub.0005s1428 Capsella rubella HOM05D003533 ORTHO05D004009 6.7e-14 80.5 81 56.8
AL5G27512 Arabidopsis lyrata HOM05D003533 ORTHO05D004009 3.3e-13 78.2 79 53.2
A01p25480 Brassica napus HOM05D013399 ORTHO05D019752 1.3e-12 76.3 83 65.1
BraA01t02465Z Brassica rapa HOM05D013399 ORTHO05D019752 1.3e-12 76.3 83 65.1
Sp5g13860 Schrenkiella parvula HOM05D003533 ORTHO05D004009 2.8e-12 75.1 79 57.0
C01p31910 Brassica napus HOM05D013399 ORTHO05D019752 6.2e-12 73.9 83 65.1
BolC1t03165H Brassica oleracea HOM05D013399 ORTHO05D019752 6.2e-12 73.9 83 65.1
Aa31LG4G16780 Aethionema arabicum HOM05D003533 ORTHO05D004009 5.3e-11 70.9 81 56.8
CARHR156900 Cardamine hirsuta HOM05D003533 ORTHO05D004009 2.6e-10 68.6 79 55.7
Duzib084G0973 Durio zibethinus HOM05D003533 ORTHO05D004009 1.9e-08 62.4 75 44.0
AT1G19020 Arabidopsis thaliana HOM05D003533 ORTHO05D004009 4.2e-08 61.2 86 43.0
AL1G31580 Arabidopsis lyrata HOM05D003533 ORTHO05D004009 5.5e-08 60.8 85 42.4
Lsat_1_v5_gn_1_12101 Lactuca sativa HOM05D003533 ORTHO05D004009 7.1e-08 60.5 78 42.3
CARHR019640 Cardamine hirsuta HOM05D003533 ORTHO05D004009 1.2e-07 59.7 79 43.0
MELO3C017124.2 Cucumis melo HOM05D003533 ORTHO05D004009 1.2e-07 59.7 76 44.7
CiPaw.06G076000 Carya illinoinensis HOM05D003533 ORTHO05D004009 2.1e-07 58.9 76 43.4
CiPaw.06G076200 Carya illinoinensis HOM05D003533 ORTHO05D004009 2.1e-07 58.9 76 43.4
TWI15G0955 Tripterygium wilfordii HOM05D003533 ORTHO05D004009 2.1e-07 58.9 78 41.0
Sp1g16980 Schrenkiella parvula HOM05D003533 ORTHO05D004009 2.7e-07 58.5 87 41.4
BcaB03g12939 Brassica carinata HOM05D003533 ORTHO05D004009 3.5e-07 58.2 75 44.0
Thecc.03G004000 Theobroma cacao HOM05D003533 ORTHO05D004009 4.6e-07 57.8 75 42.7
A08p30040 Brassica napus HOM05D003533 ORTHO05D004009 6.1e-07 57.4 74 43.2
BraA08t34939Z Brassica rapa HOM05D003533 ORTHO05D004009 6.1e-07 57.4 74 43.2
Oeu005054.1 Olea europaea HOM05D003533 ORTHO05D004009 7.9e-07 57.0 83 42.2
Thecc.03G004200 Theobroma cacao HOM05D003533 ORTHO05D004009 7.9e-07 57.0 75 42.7
CiPaw.06G076100 Carya illinoinensis HOM05D003533 ORTHO05D004009 1.0e-06 56.6 76 42.1
BcaB07g31922 Brassica carinata HOM05D003533 ORTHO05D004009 1.8e-06 55.8 84 38.1
QL10p012332 Quercus lobata HOM05D003533 ORTHO05D004009 2.3e-06 55.5 77 44.2
AT3G48180 Arabidopsis thaliana HOM05D013399 ORTHO05D019752 3.0e-06 55.1 80 52.5
BcaC09g49848 Brassica carinata HOM05D013399 ORTHO05D019752 3.0e-06 55.1 45 66.7
COL.COLO4_21432 Corchorus olitorius HOM05D003533 ORTHO05D004009 3.0e-06 55.1 76 42.1
TWI81G0654 Tripterygium wilfordii HOM05D003533 ORTHO05D004009 3.0e-06 55.1 83 39.8
A09p59550 Brassica napus HOM05D003533 ORTHO05D004009 3.9e-06 54.7 83 37.3
CiPaw.06G076300 Carya illinoinensis HOM05D003533 ORTHO05D004009 3.9e-06 54.7 76 40.8
BcaB03g14468 Brassica carinata HOM05D003533 ORTHO05D004009 6.7e-06 53.9 81 38.3
BcaC07g41276 Brassica carinata HOM05D003533 ORTHO05D004009 6.7e-06 53.9 85 37.6


User provided reference genes

Program Settings