Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g02272 Brassica carinata HOM05D006735 ORTHO05D009558 2.0e-142 509.2 276 100.0
BcaC01g03559 Brassica carinata HOM05D006735 ORTHO05D009558 8.8e-127 457.2 303 84.5
BolC3t17400H Brassica oleracea HOM05D006735 ORTHO05D009558 1.4e-116 423.3 279 85.7
BcaB01g02897 Brassica carinata HOM05D006735 ORTHO05D009558 7.0e-116 421.0 303 77.9
BcaC08g43985 Brassica carinata HOM05D006735 ORTHO05D009558 1.7e-109 399.8 303 76.2
BcaC03g18043 Brassica carinata HOM05D006735 ORTHO05D009558 7.8e-107 391.0 303 70.6
BolC3t18997H Brassica oleracea HOM05D006735 ORTHO05D009558 4.4e-86 322.0 217 85.3
BcaC08g45821 Brassica carinata HOM05D006735 ORTHO05D009558 1.6e-67 260.4 310 44.5
BcaC09g51566 Brassica carinata HOM05D006735 ORTHO05D009558 4.6e-67 258.8 318 44.3
BcaC03g15864 Brassica carinata HOM05D006735 ORTHO05D009558 6.0e-67 258.5 315 44.1
BcaC04g20691 Brassica carinata HOM05D006735 ORTHO05D009558 2.3e-66 256.5 307 45.0
C03p60980 Brassica napus HOM05D006735 ORTHO05D009558 3.9e-66 255.8 298 48.7
BcaC07g38146 Brassica carinata HOM05D006735 ORTHO05D009558 1.3e-64 250.8 319 45.5
BcaC09g51945 Brassica carinata HOM05D006735 ORTHO05D009558 1.6e-64 250.4 310 43.9
A09p42550 Brassica napus HOM05D006735 ORTHO05D009558 1.4e-63 247.3 298 46.6
A07p02010 Brassica napus HOM05D006735 ORTHO05D009558 6.9e-63 245.0 294 46.6
C03p67160 Brassica napus HOM05D006735 ORTHO05D009558 1.5e-62 243.8 172 89.5
A01p26730 Brassica napus HOM05D006735 ORTHO05D009558 1.7e-61 240.4 305 42.3
BcaC09g48693 Brassica carinata HOM05D006735 ORTHO05D009558 1.6e-56 223.8 305 42.0
BcaC01g00870 Brassica carinata HOM05D006735 ORTHO05D009558 1.2e-54 217.6 298 44.6
C04p61000 Brassica napus HOM05D006735 ORTHO05D009558 3.2e-52 209.5 271 43.9
C09p40570 Brassica napus HOM05D006735 ORTHO05D009558 2.7e-51 206.5 271 43.2
C08p11240 Brassica napus HOM05D006735 ORTHO05D009558 8.5e-37 158.3 148 49.3
BolC9t58189H Brassica oleracea HOM05D006735 ORTHO05D009558 2.7e-35 153.3 191 45.0
C04p69030 Brassica napus HOM05D006735 ORTHO05D009558 6.1e-35 152.1 223 43.5
C02p38090 Brassica napus HOM05D006735 ORTHO05D009558 3.0e-34 149.8 199 46.7
C03p71260 Brassica napus HOM05D006735 ORTHO05D009558 3.0e-34 149.8 199 46.7
C06p04290 Brassica napus HOM05D006735 ORTHO05D009558 3.0e-34 149.8 199 46.7
C09p53130 Brassica napus HOM05D006735 ORTHO05D009558 3.3e-33 146.4 189 45.5
C01p27580 Brassica napus HOM05D006735 ORTHO05D009558 7.4e-33 145.2 194 44.8
A10p02300 Brassica napus HOM05D006735 ORTHO05D009558 2.4e-31 140.2 190 44.7
C06p06100 Brassica napus HOM05D006735 ORTHO05D009558 3.5e-30 136.3 190 44.2
C08p49000 Brassica napus HOM05D006735 ORTHO05D009558 5.9e-30 135.6 193 47.2
C03p85420 Brassica napus HOM05D006735 ORTHO05D009558 7.7e-30 135.2 215 43.7
C06p13880 Brassica napus HOM05D006735 ORTHO05D009558 2.2e-29 133.7 125 72.8
BcaC01g02745 Brassica carinata HOM05D006735 ORTHO05D009558 6.7e-26 122.1 107 54.2
C03p17760 Brassica napus HOM05D006735 ORTHO05D009558 6.7e-26 122.1 177 45.8
BcaC04g18966 Brassica carinata HOM05D006735 ORTHO05D009558 1.5e-25 120.9 286 31.5
CARHR286360 Cardamine hirsuta HOM05D006735 ORTHO05D009558 1.5e-25 120.9 105 54.3
C07p37620 Brassica napus HOM05D006735 ORTHO05D010262 5.7e-25 119.0 276 31.5
C09p40840 Brassica napus HOM05D006735 ORTHO05D009558 6.3e-24 115.5 114 46.5
A08p25200 Brassica napus HOM05D006735 ORTHO05D009558 7.0e-23 112.1 98 50.0
C05p19810 Brassica napus HOM05D006735 ORTHO05D009558 9.1e-23 111.7 98 50.0
BolC2t09633H Brassica oleracea HOM05D006735 ORTHO05D009558 1.2e-22 111.3 98 50.0
C01p49020 Brassica napus HOM05D006735 ORTHO05D009558 1.6e-22 110.9 97 49.5
C01p49010 Brassica napus HOM05D006735 ORTHO05D000586 2.2e-21 107.1 198 37.4
BolC7t41471H Brassica oleracea HOM05D006735 ORTHO05D009558 3.8e-21 106.3 285 33.7
A07p01920 Brassica napus HOM05D006735 ORTHO05D009558 5.0e-21 105.9 148 39.9
BolC3t19829H Brassica oleracea HOM05D006735 ORTHO05D009558 1.1e-20 104.8 285 34.0
BolC2t07818H Brassica oleracea HOM05D006735 ORTHO05D009558 1.5e-20 104.4 107 48.6
A08p25190 Brassica napus HOM05D006735 ORTHO05D009558 4.2e-20 102.8 68 69.1
C09p22370 Brassica napus HOM05D006735 ORTHO05D009558 1.6e-19 100.9 68 67.6
BcaB04g16973 Brassica carinata HOM05D006735 ORTHO05D009558 2.1e-19 100.5 131 41.2
C07p10210 Brassica napus HOM05D006735 ORTHO05D009558 3.6e-19 99.8 154 37.0
C03p21780 Brassica napus HOM05D006735 ORTHO05D009558 1.4e-18 97.8 77 87.0
BolC8t49602H Brassica oleracea HOM05D006735 ORTHO05D009558 5.2e-18 95.9 229 37.1
C06p27010 Brassica napus HOM05D006735 ORTHO05D009558 8.8e-18 95.1 169 36.1
C08p03780 Brassica napus HOM05D006735 ORTHO05D009558 8.8e-18 95.1 169 34.9
CARHR117250 Cardamine hirsuta HOM05D000477 ORTHO05D000338 2.6e-17 93.6 65 69.2
BcaC01g02992 Brassica carinata HOM05D006735 ORTHO05D009558 1.7e-16 90.9 226 36.3
BolC8t50679H Brassica oleracea HOM05D006735 ORTHO05D009558 1.6e-14 84.3 258 34.9
BolC5t31791H Brassica oleracea HOM05D006735 ORTHO05D009558 1.0e-13 81.6 122 35.2
BolC4t22522H Brassica oleracea HOM05D006735 ORTHO05D009558 1.3e-13 81.3 113 41.6
AT2G19365 Arabidopsis thaliana HOM05D006735 ORTHO05D009558 1.1e-12 78.2 74 47.3
BolC9t53784H Brassica oleracea HOM05D010326 ORTHO05D012728 2.1e-11 73.9 136 30.1
C07p50820 Brassica napus HOM05D010326 ORTHO05D012728 2.7e-11 73.6 136 30.1
C04p14090 Brassica napus HOM05D006735 ORTHO05D041910 4.7e-11 72.8 90 41.1
BolC2t07759H Brassica oleracea HOM05D006735 ORTHO05D009558 1.4e-10 71.2 151 31.1
BcaC02g08079 Brassica carinata HOM05D006735 ORTHO05D009558 2.3e-10 70.5 98 36.7
BraA06t25399Z Brassica rapa HOM05D006735 ORTHO05D009558 4.0e-10 69.7 211 35.5
C05p34980 Brassica napus HOM05D012420 ORTHO05D019981 8.8e-10 68.6 287 23.7
CSS0029673 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 2.6e-09 67.0 144 29.2
THA.LOC104827195 Tarenaya hassleriana HOM05D006735 ORTHO05D009558 2.6e-09 67.0 296 23.3
C05p42930 Brassica napus HOM05D006735 ORTHO05D009558 5.7e-09 65.9 94 36.2
BolC5t33020H Brassica oleracea HOM05D006735 ORTHO05D009558 5.7e-09 65.9 94 36.2
THA.LOC104818562 Tarenaya hassleriana HOM05D010326 ORTHO05D000285 9.8e-09 65.1 188 25.5
BraA09t36761Z Brassica rapa HOM05D006735 ORTHO05D009558 1.3e-08 64.7 94 35.1
CSS0045263 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 1.3e-08 64.7 155 27.7
BcaC08g45606 Brassica carinata HOM05D015886 ORTHO05D017549 1.7e-08 64.3 300 21.0
BraA03t15421Z Brassica rapa HOM05D028599 ORTHO05D027333 1.7e-08 64.3 99 33.3
C09p55340 Brassica napus HOM05D006735 ORTHO05D009558 2.2e-08 63.9 179 32.4
CSS0031319 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 2.2e-08 63.9 135 31.1
AT3G19790 Arabidopsis thaliana HOM05D006735 ORTHO05D009558 2.8e-08 63.5 56 48.2
A09p18970 Brassica napus HOM05D006735 ORTHO05D009558 2.8e-08 63.5 169 34.3
CSS0005143 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 2.8e-08 63.5 173 30.1
BraA02t07687Z Brassica rapa HOM05D006735 ORTHO05D009558 3.7e-08 63.2 102 32.4
Carub.0011s0008 Capsella rubella HOM05D010326 ORTHO05D012728 3.7e-08 63.2 136 25.7
AL3G33240 Arabidopsis lyrata HOM05D006735 ORTHO05D009558 4.8e-08 62.8 64 43.8
A05p40380 Brassica napus HOM05D006735 ORTHO05D009558 4.8e-08 62.8 94 34.0
BraA10t43706Z Brassica rapa HOM05D006735 ORTHO05D009558 6.3e-08 62.4 94 34.0
C03p72010 Brassica napus HOM05D006735 ORTHO05D009558 8.3e-08 62.0 79 41.8
CSS0014901 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 1.1e-07 61.6 174 28.7
AL2G40820 Arabidopsis lyrata HOM05D006735 ORTHO05D009558 1.4e-07 61.2 64 45.3
BcaC04g20609 Brassica carinata HOM05D028599 ORTHO05D027333 1.8e-07 60.8 213 25.8
BolC9t57034H Brassica oleracea HOM05D028599 ORTHO05D027333 1.8e-07 60.8 213 25.8
CSS0039704 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 3.1e-07 60.1 174 27.6
MD12G1140100 Malus domestica HOM05D002354 ORTHO05D002469 3.1e-07 60.1 137 27.7
BcaB06g27920 Brassica carinata HOM05D012420 ORTHO05D019981 5.4e-07 59.3 210 26.2
Carub.0003s1967 Capsella rubella HOM05D006735 ORTHO05D009558 5.4e-07 59.3 64 40.6
C02p59260 Brassica napus HOM05D006735 ORTHO05D009558 7.0e-07 58.9 54 53.7
CSS0013298 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 1.2e-06 58.2 135 28.9
CSS0018277 Camellia sinensis var. sinensis HOM05D010762 ORTHO05D000285 1.2e-06 58.2 126 31.0
CSS0047854 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.2e-06 58.2 159 26.4
A03p12660 Brassica napus HOM05D015886 ORTHO05D017549 1.6e-06 57.8 249 22.1
Sp5g35140 Schrenkiella parvula HOM05D006735 ORTHO05D009558 1.6e-06 57.8 64 43.8
BolC8t47857H Brassica oleracea HOM05D006735 ORTHO05D009558 2.0e-06 57.4 169 31.4
C09p41560 Brassica napus HOM05D028599 ORTHO05D027333 3.5e-06 56.6 213 24.9
BraA03t13722Z Brassica rapa HOM05D015886 ORTHO05D017549 4.5e-06 56.2 219 23.3
Actinidia04386 Actinidia chinensis HOM05D000876 ORTHO05D000285 5.9e-06 55.8 287 22.0
Actinidia07377 Actinidia chinensis HOM05D000876 ORTHO05D000285 5.9e-06 55.8 287 22.0
Actinidia15148 Actinidia chinensis HOM05D000876 ORTHO05D000285 5.9e-06 55.8 287 22.0


User provided reference genes

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