Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g02264 Brassica carinata HOM05D000496 ORTHO05D019920 2.3e-59 232.3 137 100.0
BolC3t19004H Brassica oleracea HOM05D000496 ORTHO05D019920 3.9e-59 231.5 137 99.3
BcaC03g15107 Brassica carinata HOM05D000496 ORTHO05D000411 2.4e-32 142.5 133 69.2
BcaC03g15984 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-28 129.8 133 60.9
BraA01t03743Z Brassica rapa HOM05D000496 ORTHO05D019920 6.1e-28 127.9 131 58.0
BcaC03g15709 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-24 116.3 136 57.4
BolC2t08741H Brassica oleracea HOM05D000496 ORTHO05D019920 3.8e-22 108.6 122 59.0
BcaC02g09892 Brassica carinata HOM05D000496 ORTHO05D032642 5.5e-21 104.8 133 50.4
BcaC03g14607 Brassica carinata HOM05D000496 ORTHO05D031790 7.2e-21 104.4 146 50.0
BcaC08g46179 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-20 103.6 132 47.0
BcaC06g36700 Brassica carinata HOM05D000496 ORTHO05D000411 8.0e-20 100.9 146 47.9
BolC5t33757H Brassica oleracea HOM05D000496 ORTHO05D014937 8.0e-20 100.9 134 47.8
BcaC03g14200 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-19 100.5 131 52.7
BcaC01g03089 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-19 100.1 130 52.3
BcaC04g21671 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-19 100.1 130 52.3
BcaC08g44730 Brassica carinata HOM05D000496 ORTHO05D019920 5.2e-19 98.2 133 51.1
BcaC05g28506 Brassica carinata HOM05D000496 ORTHO05D093697 2.0e-18 96.3 138 50.0
BcaC09g49414 Brassica carinata HOM05D000496 ORTHO05D094999 2.0e-18 96.3 123 56.1
BcaC09g50802 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-18 96.3 133 48.9
BolC5t33309H Brassica oleracea HOM05D000496 ORTHO05D039269 2.0e-18 96.3 138 50.0
BcaC02g10380 Brassica carinata HOM05D000496 ORTHO05D000411 2.6e-18 95.9 132 50.0
BcaC07g38782 Brassica carinata HOM05D000496 ORTHO05D000411 4.4e-18 95.1 133 47.4
BcaC02g09460 Brassica carinata HOM05D000496 ORTHO05D014937 5.7e-18 94.7 134 52.2
BcaC08g47088 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-17 93.6 135 50.4
BcaC09g49650 Brassica carinata HOM05D000496 ORTHO05D095876 2.8e-17 92.4 133 50.4
BcaC01g01905 Brassica carinata HOM05D000496 ORTHO05D014937 3.7e-17 92.0 134 49.3
BcaC09g47909 Brassica carinata HOM05D000496 ORTHO05D000411 3.7e-17 92.0 138 47.8
BolC9t59068H Brassica oleracea HOM05D000496 ORTHO05D014937 3.7e-17 92.0 135 46.7
BolC7t41272H Brassica oleracea HOM05D000496 ORTHO05D000411 4.8e-17 91.7 135 45.9
BolC7t43560H Brassica oleracea HOM05D000496 ORTHO05D039093 4.8e-17 91.7 134 47.0
BcaC06g34334 Brassica carinata HOM05D000496 ORTHO05D039093 6.3e-17 91.3 134 47.0
BcaC01g05229 Brassica carinata HOM05D000496 ORTHO05D039269 1.4e-16 90.1 138 47.1
BcaC05g28640 Brassica carinata HOM05D000496 ORTHO05D014937 1.4e-16 90.1 140 52.1
BcaC08g44039 Brassica carinata HOM05D000496 ORTHO05D014937 1.4e-16 90.1 135 45.9
BcaC04g22204 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-16 89.7 132 43.9
C04p35470 Brassica napus HOM05D000496 ORTHO05D032642 1.8e-16 89.7 121 47.9
BcaC03g16444 Brassica carinata HOM05D000496 ORTHO05D000411 2.4e-16 89.4 130 50.0
BolC4t25099H Brassica oleracea HOM05D000496 ORTHO05D032642 2.4e-16 89.4 121 47.9
BcaC06g36040 Brassica carinata HOM05D005496 ORTHO05D006677 3.1e-16 89.0 126 47.6
C04p23060 Brassica napus HOM05D000496 ORTHO05D019920 4.1e-16 88.6 68 73.5
BolC4t26549H Brassica oleracea HOM05D000496 ORTHO05D000411 4.1e-16 88.6 148 45.3
BcaC03g17067 Brassica carinata HOM05D000496 ORTHO05D095706 5.3e-16 88.2 133 48.1
BcaC04g19004 Brassica carinata HOM05D000496 ORTHO05D000411 5.3e-16 88.2 135 45.9
BcaC07g37461 Brassica carinata HOM05D000496 ORTHO05D014937 5.3e-16 88.2 135 45.9
BcaC01g01239 Brassica carinata HOM05D000496 ORTHO05D000411 7.0e-16 87.8 130 43.8
BcaC01g01965 Brassica carinata HOM05D000496 ORTHO05D000411 7.0e-16 87.8 130 44.6
BcaC08g44837 Brassica carinata HOM05D000496 ORTHO05D000411 7.0e-16 87.8 131 44.3
BcaC03g16242 Brassica carinata HOM05D030143 ORTHO05D002152 9.1e-16 87.4 135 45.9
BcaB07g33420 Brassica carinata HOM05D000496 ORTHO05D014937 1.6e-15 86.7 135 44.4
BcaC08g43454 Brassica carinata HOM05D000496 ORTHO05D031880 7.7e-15 84.3 135 44.4
BolC8t49340H Brassica oleracea HOM05D000496 ORTHO05D014937 7.7e-15 84.3 118 45.8
BcaB08g35328 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-14 84.0 133 45.1
A05p20030 Brassica napus HOM05D000496 ORTHO05D014937 1.3e-14 83.6 138 46.4
BraA05t20909Z Brassica rapa HOM05D000496 ORTHO05D014937 1.3e-14 83.6 138 46.4
BcaC01g02163 Brassica carinata HOM05D000496 ORTHO05D000411 3.8e-14 82.0 118 44.9
BcaC08g45123 Brassica carinata HOM05D000496 ORTHO05D000411 3.8e-14 82.0 135 43.7
BcaC03g15417 Brassica carinata HOM05D000496 ORTHO05D000411 5.0e-14 81.6 155 40.0
BcaC04g22137 Brassica carinata HOM05D000496 ORTHO05D019920 5.0e-14 81.6 66 69.7
BcaC06g33823 Brassica carinata HOM05D000496 ORTHO05D031880 6.5e-14 81.3 135 43.7
BcaC08g43480 Brassica carinata HOM05D000496 ORTHO05D000411 6.5e-14 81.3 136 44.1
BcaC03g14600 Brassica carinata HOM05D022631 ORTHO05D024363 1.5e-13 80.1 113 50.4
BcaC04g19440 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-13 79.0 135 41.5
BolC4t26275H Brassica oleracea HOM05D000496 ORTHO05D039111 3.2e-13 79.0 133 42.1
BolC6t35943H Brassica oleracea HOM05D000496 ORTHO05D000411 4.2e-13 78.6 136 43.4
BcaB06g27458 Brassica carinata HOM05D000496 ORTHO05D039111 9.4e-13 77.4 133 41.4
BcaC01g02211 Brassica carinata HOM05D000496 ORTHO05D000411 9.4e-13 77.4 141 39.0
BcaC04g22294 Brassica carinata HOM05D000496 ORTHO05D000411 9.4e-13 77.4 133 42.9
BcaC05g25070 Brassica carinata HOM05D030143 ORTHO05D039637 8.0e-12 74.3 73 58.9
A03p66750 Brassica napus HOM05D022631 ORTHO05D024363 2.3e-11 72.8 105 49.5
C06p36470 Brassica napus HOM05D030143 ORTHO05D039637 2.3e-11 72.8 68 60.3
BcaC04g23650 Brassica carinata HOM05D000496 ORTHO05D000411 4.0e-11 72.0 73 58.9
BcaB01g01320 Brassica carinata HOM05D030143 ORTHO05D092293 5.2e-11 71.6 75 60.0
BcaC02g10520 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-09 67.0 122 44.3
BolC3t20864H Brassica oleracea HOM05D000496 ORTHO05D014937 1.7e-09 66.6 110 41.8
BcaC03g16659 Brassica carinata HOM05D000496 ORTHO05D039733 2.2e-09 66.2 71 56.3
BcaC01g01165 Brassica carinata HOM05D000496 ORTHO05D000411 8.3e-09 64.3 149 38.9
C02p20400 Brassica napus HOM05D022631 ORTHO05D024363 1.4e-08 63.5 99 49.5
BolC2t08173H Brassica oleracea HOM05D022631 ORTHO05D024363 1.4e-08 63.5 99 49.5
BolC9t55084H Brassica oleracea HOM05D020706 ORTHO05D032392 3.1e-08 62.4 128 37.5
BcaC05g27902 Brassica carinata HOM05D000496 ORTHO05D000411 4.1e-08 62.0 129 36.4
BraA01t02806Z Brassica rapa HOM05D022631 ORTHO05D024363 5.4e-08 61.6 99 47.5
BcaNung04301 Brassica carinata HOM05D000496 ORTHO05D000411 7.0e-08 61.2 128 39.8
BcaC01g01876 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-07 60.1 58 58.6
BcaC09g49773 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-07 60.1 133 43.6
BcaB01g04370 Brassica carinata HOM05D010392 ORTHO05D090901 2.0e-07 59.7 126 35.7
BcaC09g50172 Brassica carinata HOM05D025630 ORTHO05D032542 2.7e-07 59.3 67 55.2
BcaC04g20576 Brassica carinata HOM05D000496 ORTHO05D039987 3.5e-07 58.9 134 35.1
BcaC06g36694 Brassica carinata HOM05D000496 ORTHO05D094614 4.5e-07 58.5 92 41.3
BcaB01g02810 Brassica carinata HOM05D000496 ORTHO05D000411 7.7e-07 57.8 142 34.5
BcaC02g08909 Brassica carinata HOM05D010392 ORTHO05D000411 2.3e-06 56.2 144 33.3
BcaB06g26444 Brassica carinata HOM05D000496 ORTHO05D091650 2.9e-06 55.8 131 31.3
BolC9t55004H Brassica oleracea HOM05D000496 ORTHO05D014937 2.9e-06 55.8 133 35.3
BcaC06g35493 Brassica carinata HOM05D010392 ORTHO05D000411 6.6e-06 54.7 135 34.1


User provided reference genes

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