Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g02243 Brassica carinata HOM05D000675 ORTHO05D032590 1.6e-45 185.7 88 100.0
C03p67470 Brassica napus HOM05D000675 ORTHO05D032590 1.6e-45 185.7 88 100.0
BolSC21t60281H Brassica oleracea HOM05D000675 ORTHO05D032590 1.6e-45 185.7 88 100.0
C05p25450 Brassica napus HOM05D000675 ORTHO05D003044 2.6e-16 88.6 81 51.9
BcaC05g26494 Brassica carinata HOM05D000675 ORTHO05D000395 4.5e-16 87.8 81 51.9
BolC5t30502H Brassica oleracea HOM05D000675 ORTHO05D003044 4.5e-16 87.8 81 50.6
BcaC04g18662 Brassica carinata HOM05D000675 ORTHO05D000395 5.9e-16 87.4 81 50.6
C09p22720 Brassica napus HOM05D000675 ORTHO05D003044 5.9e-16 87.4 81 51.9
BolC9t55189H Brassica oleracea HOM05D000675 ORTHO05D003044 5.9e-16 87.4 81 51.9
BcaB07g33977 Brassica carinata HOM05D000675 ORTHO05D003044 1.7e-15 85.9 80 50.0
BcaC01g01731 Brassica carinata HOM05D000675 ORTHO05D003044 1.1e-14 83.2 81 48.1
BcaB01g03782 Brassica carinata HOM05D000675 ORTHO05D003044 1.4e-14 82.8 80 48.8
C07p21220 Brassica napus HOM05D000675 ORTHO05D003044 1.4e-14 82.8 80 51.2
C09p12130 Brassica napus HOM05D000675 ORTHO05D003044 4.2e-14 81.3 79 50.6
A01p24790 Brassica napus HOM05D000675 ORTHO05D011634 5.5e-14 80.9 80 50.0
BcaB07g32139 Brassica carinata HOM05D000675 ORTHO05D000395 2.7e-13 78.6 76 50.0
BcaB03g16529 Brassica carinata HOM05D000675 ORTHO05D003044 6.1e-13 77.4 78 48.7
BolC6t35505H Brassica oleracea HOM05D000675 ORTHO05D000395 1.0e-12 76.6 74 48.6
C03p78170 Brassica napus HOM05D000675 ORTHO05D003044 1.8e-12 75.9 80 48.8
C06p36630 Brassica napus HOM05D000675 ORTHO05D003044 1.8e-12 75.9 79 46.8
C07p05490 Brassica napus HOM05D000675 ORTHO05D003044 1.8e-12 75.9 78 47.4
C08p03650 Brassica napus HOM05D000675 ORTHO05D003044 1.8e-12 75.9 81 48.1
BolC7t40949H Brassica oleracea HOM05D000675 ORTHO05D003044 2.3e-12 75.5 78 47.4
BolC6t36482H Brassica oleracea HOM05D000675 ORTHO05D003044 3.0e-12 75.1 81 45.7
BcaNung03743 Brassica carinata HOM05D000675 ORTHO05D000395 3.9e-12 74.7 80 46.2
A02p36630 Brassica napus HOM05D000675 ORTHO05D003044 3.9e-12 74.7 79 46.8
C06p13240 Brassica napus HOM05D000675 ORTHO05D003044 3.9e-12 74.7 81 45.7
BraA02t08658Z Brassica rapa HOM05D000675 ORTHO05D003044 3.9e-12 74.7 79 46.8
BcaB01g01025 Brassica carinata HOM05D000675 ORTHO05D000395 5.1e-12 74.3 75 48.0
BcaB01g03290 Brassica carinata HOM05D000675 ORTHO05D003044 5.1e-12 74.3 75 48.0
BcaC01g05607 Brassica carinata HOM05D000675 ORTHO05D000395 5.1e-12 74.3 80 47.5
BcaC03g14557 Brassica carinata HOM05D000675 ORTHO05D000395 5.1e-12 74.3 76 46.1
BolC3t14837H Brassica oleracea HOM05D000675 ORTHO05D000395 5.1e-12 74.3 80 47.5
BcaC09g51286 Brassica carinata HOM05D000675 ORTHO05D000395 6.7e-12 73.9 76 47.4
BcaB01g01312 Brassica carinata HOM05D000675 ORTHO05D003044 8.8e-12 73.6 80 42.5
BcaB06g27534 Brassica carinata HOM05D000675 ORTHO05D000395 1.5e-11 72.8 77 48.1
BcaB05g22367 Brassica carinata HOM05D000675 ORTHO05D000395 2.0e-11 72.4 77 45.5
BcaB05g24643 Brassica carinata HOM05D000675 ORTHO05D000395 2.5e-11 72.0 76 44.7
A10p13650 Brassica napus HOM05D000675 ORTHO05D000395 2.5e-11 72.0 74 47.3
BcaB07g31727 Brassica carinata HOM05D000675 ORTHO05D000395 3.3e-11 71.6 81 44.4
BcaC09g49894 Brassica carinata HOM05D000675 ORTHO05D013510 7.4e-11 70.5 75 48.0
BcaC09g49036 Brassica carinata HOM05D000675 ORTHO05D013510 9.7e-11 70.1 75 46.7
BcaB05g24177 Brassica carinata HOM05D000675 ORTHO05D000395 1.7e-10 69.3 77 45.5
BcaC09g50794 Brassica carinata HOM05D000675 ORTHO05D013510 1.7e-10 69.3 75 46.7
A01p19480 Brassica napus HOM05D000675 ORTHO05D003044 1.7e-10 69.3 79 44.3
C04p39400 Brassica napus HOM05D000675 ORTHO05D003044 2.8e-10 68.6 79 44.3
C04p39650 Brassica napus HOM05D000675 ORTHO05D003044 2.8e-10 68.6 79 44.3
BolC4t25506H Brassica oleracea HOM05D000675 ORTHO05D003044 2.8e-10 68.6 79 44.3
BcaB06g26589 Brassica carinata HOM05D000675 ORTHO05D000395 3.7e-10 68.2 77 46.8
C04p39430 Brassica napus HOM05D000675 ORTHO05D003044 3.7e-10 68.2 79 44.3
BolC1t04293H Brassica oleracea HOM05D000675 ORTHO05D003044 3.7e-10 68.2 75 46.7
BolC4t25508H Brassica oleracea HOM05D000675 ORTHO05D003044 3.7e-10 68.2 79 44.3
BolC4t25532H Brassica oleracea HOM05D000675 ORTHO05D003044 3.7e-10 68.2 79 44.3
BcaC01g00314 Brassica carinata HOM05D000675 ORTHO05D000395 4.8e-10 67.8 83 47.0
BolC1t03092H Brassica oleracea HOM05D000675 ORTHO05D003044 4.8e-10 67.8 79 46.8
BcaB07g31602 Brassica carinata HOM05D000675 ORTHO05D000395 1.4e-09 66.2 76 44.7
BcaC06g36056 Brassica carinata HOM05D000675 ORTHO05D013510 1.8e-09 65.9 75 44.0
BcaB05g22797 Brassica carinata HOM05D000675 ORTHO05D003044 2.4e-09 65.5 81 42.0
C01p31580 Brassica napus HOM05D000675 ORTHO05D013510 9.1e-09 63.5 83 44.6
A07p03350 Brassica napus HOM05D000675 ORTHO05D003044 2.0e-08 62.4 70 42.9
BraA05t20771Z Brassica rapa HOM05D000675 ORTHO05D003044 2.0e-08 62.4 70 42.9
BcaC02g07514 Brassica carinata HOM05D000675 ORTHO05D000395 2.6e-08 62.0 72 43.1
BcaC01g03691 Brassica carinata HOM05D000675 ORTHO05D000395 3.4e-08 61.6 70 41.4
BcaC02g10278 Brassica carinata HOM05D000675 ORTHO05D000395 3.4e-08 61.6 75 44.0
C03p49520 Brassica napus HOM05D000675 ORTHO05D003044 3.4e-08 61.6 70 41.4
C09p40920 Brassica napus HOM05D000675 ORTHO05D003044 3.4e-08 61.6 70 41.4
BolC9t56973H Brassica oleracea HOM05D000675 ORTHO05D003044 3.4e-08 61.6 70 41.4
BcaC09g49264 Brassica carinata HOM05D000675 ORTHO05D000395 4.5e-08 61.2 72 41.7
C03p68420 Brassica napus HOM05D000675 ORTHO05D003044 4.5e-08 61.2 70 38.6
C05p51310 Brassica napus HOM05D000675 ORTHO05D003044 5.9e-08 60.8 74 40.5
A04p09980 Brassica napus HOM05D000675 ORTHO05D021717 7.7e-08 60.5 74 36.5
BraA04t16659Z Brassica rapa HOM05D000675 ORTHO05D021717 7.7e-08 60.5 74 36.5
BcaC02g11195 Brassica carinata HOM05D000675 ORTHO05D000395 1.3e-07 59.7 73 41.1
C04p19390 Brassica napus HOM05D000675 ORTHO05D003044 1.3e-07 59.7 73 41.1
BolC4t23472H Brassica oleracea HOM05D000675 ORTHO05D003044 1.3e-07 59.7 73 41.1
A09p51430 Brassica napus HOM05D000675 ORTHO05D003044 1.7e-07 59.3 70 41.4
A10p11800 Brassica napus HOM05D000675 ORTHO05D003044 1.7e-07 59.3 70 41.4
BraA10t43278Z Brassica rapa HOM05D000675 ORTHO05D000395 1.7e-07 59.3 70 41.4
BcaNung03607 Brassica carinata HOM05D000675 ORTHO05D000395 3.8e-07 58.2 57 50.9
C05p16990 Brassica napus HOM05D000675 ORTHO05D003044 5.0e-07 57.8 77 39.0
BcaC02g10973 Brassica carinata HOM05D000675 ORTHO05D003044 1.4e-06 56.2 66 43.9
BcaB04g20306 Brassica carinata HOM05D000675 ORTHO05D000395 5.5e-06 54.3 70 40.0
BolC5t30407H Brassica oleracea HOM05D000675 ORTHO05D003044 5.5e-06 54.3 77 36.4
A09p33960 Brassica napus HOM05D000675 ORTHO05D003044 9.4e-06 53.5 69 40.6
BraA09t38942Z Brassica rapa HOM05D000675 ORTHO05D003044 9.4e-06 53.5 69 40.6


User provided reference genes

Program Settings