Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g02238 Brassica carinata HOM05D006121 ORTHO05D009559 2.8e-274 948.0 474 100.0
BcaC06g36507 Brassica carinata HOM05D006121 ORTHO05D009559 1.2e-168 597.0 518 64.5
BcaC03g16227 Brassica carinata HOM05D006121 ORTHO05D009559 1.3e-165 587.0 507 66.3
BcaC04g23210 Brassica carinata HOM05D006121 ORTHO05D009559 1.1e-153 547.4 526 58.6
BcaC05g27433 Brassica carinata HOM05D006121 ORTHO05D009559 4.4e-150 535.4 495 61.2
BcaC07g37897 Brassica carinata HOM05D006121 ORTHO05D009559 4.5e-147 525.4 490 60.8
BcaC01g05819 Brassica carinata HOM05D006121 ORTHO05D009559 5.5e-145 518.5 524 58.4
BcaC07g37903 Brassica carinata HOM05D006121 ORTHO05D009559 1.0e-138 497.7 546 55.3
BcaC04g20762 Brassica carinata HOM05D006121 ORTHO05D009559 3.0e-135 486.1 528 54.4
BcaC03g17371 Brassica carinata HOM05D006121 ORTHO05D009559 1.7e-133 480.3 492 57.3
BcaC03g15130 Brassica carinata HOM05D006121 ORTHO05D009559 2.3e-122 443.4 537 50.8
BcaC04g23066 Brassica carinata HOM05D006121 ORTHO05D009559 1.1e-119 434.5 446 59.0
BcaC03g16371 Brassica carinata HOM05D006121 ORTHO05D009559 6.4e-117 425.2 468 56.0
BcaC06g35988 Brassica carinata HOM05D006121 ORTHO05D009559 4.2e-100 369.4 346 62.4
BraA09t38607Z Brassica rapa HOM05D006121 ORTHO05D009559 2.8e-96 356.7 436 50.5
BcaC04g20594 Brassica carinata HOM05D006121 ORTHO05D009559 1.3e-88 331.3 397 52.4
BolC7t41498H Brassica oleracea HOM05D006121 ORTHO05D009559 8.2e-56 222.2 167 64.7
BraA06t25079Z Brassica rapa HOM05D006121 ORTHO05D009559 1.1e-49 201.8 151 67.5
BcaC08g42951 Brassica carinata HOM05D006121 ORTHO05D009559 7.7e-46 189.1 165 52.1
BcaC09g51377 Brassica carinata HOM05D006121 ORTHO05D009559 1.9e-44 184.5 423 34.5
BolC9t56759H Brassica oleracea HOM05D006121 ORTHO05D009559 8.0e-43 179.1 122 76.2
BcaC01g02132 Brassica carinata HOM05D006121 ORTHO05D009559 6.7e-42 176.0 175 48.0
BcaC01g06835 Brassica carinata HOM05D006121 ORTHO05D009559 6.7e-42 176.0 524 28.2
BcaC09g49299 Brassica carinata HOM05D006121 ORTHO05D009559 6.7e-42 176.0 515 30.5
BcaC05g27793 Brassica carinata HOM05D006121 ORTHO05D009559 2.0e-41 174.5 198 45.5
BcaC09g49745 Brassica carinata HOM05D006121 ORTHO05D009559 9.7e-41 172.2 166 48.8
BcaC02g11248 Brassica carinata HOM05D006121 ORTHO05D009559 1.4e-39 168.3 501 29.9
BcaC07g37147 Brassica carinata HOM05D006121 ORTHO05D009559 1.4e-39 168.3 182 45.6
BcaC02g11960 Brassica carinata HOM05D006121 ORTHO05D009559 1.8e-39 167.9 527 29.0
BcaC09g49729 Brassica carinata HOM05D006121 ORTHO05D009559 3.1e-39 167.2 179 48.0
BcaC05g27675 Brassica carinata HOM05D006121 ORTHO05D009559 7.7e-38 162.5 164 47.0
BcaC04g21502 Brassica carinata HOM05D006121 ORTHO05D009559 9.4e-36 155.6 174 46.0
BolC9t58013H Brassica oleracea HOM05D006121 ORTHO05D009559 1.2e-35 155.2 182 48.9
BcaC09g49541 Brassica carinata HOM05D006121 ORTHO05D009559 5.2e-34 149.8 184 51.6
BcaC03g16521 Brassica carinata HOM05D006121 ORTHO05D009559 1.5e-33 148.3 148 48.0
BcaC05g28468 Brassica carinata HOM05D006121 ORTHO05D009559 5.7e-33 146.4 164 43.3
Carub.0003s2904 Capsella rubella HOM05D006121 ORTHO05D009559 8.3e-32 142.5 262 37.4
BcaC03g16486 Brassica carinata HOM05D006121 ORTHO05D009559 1.3e-29 135.2 161 42.2
BolC3t20163H Brassica oleracea HOM05D006121 ORTHO05D009559 1.3e-29 135.2 371 29.1
BolC4t24012H Brassica oleracea HOM05D006121 ORTHO05D009559 2.8e-27 127.5 72 80.6
BcaC05g28043 Brassica carinata HOM05D006121 ORTHO05D009559 1.0e-26 125.6 109 51.4
BcaC09g49792 Brassica carinata HOM05D006121 ORTHO05D009559 4.4e-25 120.2 119 58.8
BcaB05g23675 Brassica carinata HOM05D006121 ORTHO05D016754 5.7e-25 119.8 195 41.5
BcaC08g44795 Brassica carinata HOM05D006121 ORTHO05D027423 2.8e-24 117.5 134 54.5
BcaC08g43580 Brassica carinata HOM05D006121 ORTHO05D009559 6.3e-24 116.3 443 28.7
BcaC06g36167 Brassica carinata HOM05D006121 ORTHO05D009559 2.0e-22 111.3 430 27.4
BcaC08g42838 Brassica carinata HOM05D006121 ORTHO05D009559 7.8e-22 109.4 91 51.6
BcaC08g45230 Brassica carinata HOM05D006121 ORTHO05D002427 2.9e-21 107.5 303 32.0
BcaC02g09767 Brassica carinata HOM05D006121 ORTHO05D009559 6.6e-21 106.3 206 33.5
BcaC04g20036 Brassica carinata HOM05D006121 ORTHO05D009559 8.6e-21 105.9 120 54.2
Carub.0007s3611 Capsella rubella HOM05D009492 ORTHO05D011693 1.1e-20 105.5 179 33.5
BcaC06g35841 Brassica carinata HOM05D006121 ORTHO05D009559 1.9e-20 104.8 93 51.6
Carub.0001s3399 Capsella rubella HOM05D008386 ORTHO05D010572 4.3e-20 103.6 414 25.6
BcaB04g17962 Brassica carinata HOM05D006121 ORTHO05D009559 5.6e-20 103.2 90 55.6
BcaC04g20823 Brassica carinata HOM05D006121 ORTHO05D009559 9.5e-20 102.4 136 40.4
BcaC09g50206 Brassica carinata HOM05D006121 ORTHO05D009559 9.5e-20 102.4 113 44.2
AL6G47370 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.8e-19 100.9 186 32.3
AL8G11870 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.6e-19 100.5 186 31.7
AL3G38160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 4.7e-19 100.1 186 31.2
AL2G23360 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 6.1e-19 99.8 187 33.2
BcaC07g37265 Brassica carinata HOM05D006121 ORTHO05D009559 6.1e-19 99.8 96 50.0
Carub.0007s3731 Capsella rubella HOM05D009492 ORTHO05D011693 6.1e-19 99.8 179 31.8
AL5G23160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 8.0e-19 99.4 173 32.9
AL1G57330 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.0e-18 99.0 186 31.7
AL2G18400 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.0e-18 99.0 186 31.7
AL3G37710 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.0e-18 99.0 173 32.9
AT4G03830 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 1.8e-18 98.2 182 29.1
BcaC03g15126 Brassica carinata HOM05D006121 ORTHO05D009559 1.8e-18 98.2 132 38.6
BcaC03g15823 Brassica carinata HOM05D006121 ORTHO05D009559 1.8e-18 98.2 112 40.2
AL4G17450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 4.0e-18 97.1 132 42.4
AL2G23320 Arabidopsis lyrata HOM05D009492 ORTHO05D011693 5.2e-18 96.7 172 29.1
AT1G51172 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 5.2e-18 96.7 182 26.4
Carub.0002s0942 Capsella rubella HOM05D009492 ORTHO05D011693 6.8e-18 96.3 435 26.2
AL1G47450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 8.9e-18 95.9 245 30.6
BcaC01g00176 Brassica carinata HOM05D006121 ORTHO05D009559 1.2e-17 95.5 106 45.3
AL1G50390 Arabidopsis lyrata HOM05D009492 ORTHO05D011693 2.0e-17 94.7 183 29.5
AL1G65160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.6e-17 94.4 245 29.8
AL4G24140 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.6e-17 94.4 245 30.2
AL5G12240 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.6e-17 94.4 245 30.2
AL8G20450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.6e-17 94.4 250 30.0
AL8G33480 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.4e-17 94.0 158 32.9
AL8G45410 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 4.4e-17 93.6 245 29.8
AT5G32590 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 1.3e-16 92.0 181 29.3
AL1G61970 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.7e-16 91.7 245 29.4
Carub.0005s0956 Capsella rubella HOM05D009492 ORTHO05D011693 1.7e-16 91.7 494 25.7
AL6G42690 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.2e-16 91.3 245 29.8
AL9U10230 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.2e-16 91.3 245 29.4
Carub.0002s0975 Capsella rubella HOM05D009492 ORTHO05D011693 4.9e-16 90.1 143 35.0
AL6G45550 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 6.4e-16 89.7 166 30.7
Carub.0006s2644 Capsella rubella HOM05D009492 ORTHO05D011693 1.4e-15 88.6 178 30.3
BolC5t32557H Brassica oleracea HOM05D006121 ORTHO05D009559 4.1e-15 87.0 97 48.5
Carub.0004s0672 Capsella rubella HOM05D009492 ORTHO05D011693 7.0e-15 86.3 177 28.2
Carub.0001s3424 Capsella rubella HOM05D009492 ORTHO05D011693 2.7e-14 84.3 174 27.0
Carub.0002s1048 Capsella rubella HOM05D009492 ORTHO05D011693 7.8e-14 82.8 186 29.6
Carub.0003s2742 Capsella rubella HOM05D009492 ORTHO05D011693 7.8e-14 82.8 420 23.6
BcaC05g27828 Brassica carinata HOM05D006121 ORTHO05D009559 1.7e-13 81.6 74 62.2
BcaC02g10718 Brassica carinata HOM05D006121 ORTHO05D009559 2.3e-13 81.3 88 45.5
BcaC04g19800 Brassica carinata HOM05D006121 ORTHO05D023846 3.0e-13 80.9 45 80.0
BcaC02g10790 Brassica carinata HOM05D006121 ORTHO05D023846 1.1e-12 79.0 49 75.5
Carub.0014s0006 Capsella rubella HOM05D009492 ORTHO05D011693 1.9e-12 78.2 161 25.5
BcaC01g02131 Brassica carinata HOM05D006121 ORTHO05D013509 2.5e-12 77.8 224 30.8
BcaC02g10683 Brassica carinata HOM05D008386 ORTHO05D010572 3.3e-12 77.4 280 26.4
BcaC05g26479 Brassica carinata HOM05D008386 ORTHO05D010572 4.3e-12 77.0 161 34.8
Carub.0002s0916 Capsella rubella HOM05D009492 ORTHO05D011693 4.3e-12 77.0 135 33.3
BcaC01g02130 Brassica carinata HOM05D008386 ORTHO05D010572 1.6e-11 75.1 280 26.4
BcaC09g49805 Brassica carinata HOM05D006121 ORTHO05D023846 1.6e-11 75.1 45 66.7
Carub.0007s3212 Capsella rubella HOM05D009492 ORTHO05D011693 1.6e-11 75.1 162 29.0
BcaC08g42828 Brassica carinata HOM05D008386 ORTHO05D010572 2.1e-11 74.7 283 25.8
BcaNung03347 Brassica carinata HOM05D006121 ORTHO05D009559 2.1e-11 74.7 52 73.1
BcaB08g35499 Brassica carinata HOM05D008386 ORTHO05D010572 2.8e-11 74.3 158 34.8
BcaC03g16573 Brassica carinata HOM05D006121 ORTHO05D009559 2.8e-11 74.3 170 35.3
BcaC04g22048 Brassica carinata HOM05D006121 ORTHO05D009559 4.7e-11 73.6 76 47.4
BcaC03g15124 Brassica carinata HOM05D008386 ORTHO05D010572 1.1e-10 72.4 159 31.4
BraA05t20949Z Brassica rapa HOM05D006121 ORTHO05D009559 1.4e-10 72.0 62 51.6
BcaC04g20824 Brassica carinata HOM05D006121 ORTHO05D013509 1.8e-10 71.6 225 28.9
BcaC06g35787 Brassica carinata HOM05D006121 ORTHO05D009559 2.3e-10 71.2 62 61.3
AT3G30230 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 3.1e-10 70.9 118 33.9
Carub.0005s0210 Capsella rubella HOM05D010629 ORTHO05D005680 3.1e-10 70.9 165 27.3
Carub.0007s2123 Capsella rubella HOM05D010629 ORTHO05D005680 4.0e-10 70.5 149 28.2
AT1G46696 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 5.2e-10 70.1 182 23.6
BcaC01g01840 Brassica carinata HOM05D008386 ORTHO05D010572 5.2e-10 70.1 183 32.8
BcaC08g44457 Brassica carinata HOM05D006121 ORTHO05D009559 5.2e-10 70.1 106 42.5
Carub.0353s0001 Capsella rubella HOM05D010629 ORTHO05D005680 5.2e-10 70.1 155 27.7
BcaC06g33795 Brassica carinata HOM05D003421 ORTHO05D003268 1.5e-09 68.6 68 60.3
Carub.0002s1244 Capsella rubella HOM05D010629 ORTHO05D005680 1.5e-09 68.6 149 27.5
BcaC04g23560 Brassica carinata HOM05D006121 ORTHO05D013509 2.0e-09 68.2 225 28.9
Carub.0006s0276 Capsella rubella HOM05D010629 ORTHO05D005680 2.0e-09 68.2 149 27.5
BcaC04g20966 Brassica carinata HOM05D006121 ORTHO05D009559 2.6e-09 67.8 380 26.6
Carub.0004s1788 Capsella rubella HOM05D009492 ORTHO05D011693 2.6e-09 67.8 178 26.4
CARHR119450 Cardamine hirsuta HOM05D006121 ORTHO05D043487 2.6e-09 67.8 85 41.2
BcaB02g06461 Brassica carinata HOM05D006121 ORTHO05D009559 4.4e-09 67.0 221 29.9
Carub.0003s2807 Capsella rubella HOM05D010629 ORTHO05D005680 5.8e-09 66.6 154 22.7
AT1G20400 Arabidopsis thaliana HOM05D011598 ORTHO05D013181 9.8e-09 65.9 159 27.7
BcaC02g10386 Brassica carinata HOM05D008386 ORTHO05D010572 1.3e-08 65.5 280 26.1
BcaC02g10895 Brassica carinata HOM05D006121 ORTHO05D013509 1.7e-08 65.1 198 29.8
C05p29190 Brassica napus HOM05D006121 ORTHO05D009559 1.7e-08 65.1 51 54.9
AL8G10170 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.9e-08 64.3 158 26.6
BraA06t25080Z Brassica rapa HOM05D006121 ORTHO05D023846 2.9e-08 64.3 38 68.4
BcaC06g34988 Brassica carinata HOM05D006121 ORTHO05D009559 4.9e-08 63.5 72 50.0
AT1G36100 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 6.4e-08 63.2 118 30.5
BcaC06g35840 Brassica carinata HOM05D006121 ORTHO05D013509 6.4e-08 63.2 225 29.3
Sp4g11160 Schrenkiella parvula HOM05D010772 ORTHO05D005680 6.4e-08 63.2 169 25.4
BcaC03g16668 Brassica carinata HOM05D006121 ORTHO05D009559 8.3e-08 62.8 98 39.8
AT3G42060 Arabidopsis thaliana HOM05D010629 ORTHO05D005680 1.1e-07 62.4 135 31.1
Carub.0072s0001 Capsella rubella HOM05D010629 ORTHO05D005680 1.4e-07 62.0 246 23.2
BcaB04g18086 Brassica carinata HOM05D008386 ORTHO05D010572 2.4e-07 61.2 151 31.8
Carub.0007s3050 Capsella rubella HOM05D010629 ORTHO05D005680 2.4e-07 61.2 144 22.9
BcaC03g16745 Brassica carinata HOM05D006121 ORTHO05D009559 3.2e-07 60.8 71 43.7
Sp6g07550 Schrenkiella parvula HOM05D010772 ORTHO05D005680 4.1e-07 60.5 145 26.2
BcaC04g21234 Brassica carinata HOM05D008386 ORTHO05D010572 1.6e-06 58.5 290 25.2
BcaC09g49551 Brassica carinata HOM05D008386 ORTHO05D010572 1.6e-06 58.5 251 25.1
Carub.0004s1088 Capsella rubella HOM05D010629 ORTHO05D005680 1.6e-06 58.5 129 27.1
Sp4g04860 Schrenkiella parvula HOM05D010772 ORTHO05D005680 1.6e-06 58.5 134 27.6
AT3G43148 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 2.1e-06 58.2 92 32.6
BcaC08g43697 Brassica carinata HOM05D006121 ORTHO05D009559 2.1e-06 58.2 60 45.0
CARHR181090 Cardamine hirsuta HOM05D008458 ORTHO05D010628 4.6e-06 57.0 89 33.7
Carub.0002s1012 Capsella rubella HOM05D010629 ORTHO05D005680 6.0e-06 56.6 90 34.4


User provided reference genes

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