Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g02224 Brassica carinata HOM05D007759 ORTHO05D008318 2.0e-92 342.4 172 100.0
C03p67680 Brassica napus HOM05D007759 ORTHO05D008318 2.0e-92 342.4 172 100.0
BolSC21t60227H Brassica oleracea HOM05D007759 ORTHO05D008318 7.5e-92 340.5 172 99.4
BcaC08g46655 Brassica carinata HOM05D007759 ORTHO05D008318 2.3e-77 292.4 171 87.1
A09p15820 Brassica napus HOM05D007759 ORTHO05D008318 6.8e-77 290.8 171 86.5
BcaC03g17946 Brassica carinata HOM05D007759 ORTHO05D008318 2.6e-76 288.9 171 86.0
A07p18500 Brassica napus HOM05D007759 ORTHO05D008318 8.3e-75 283.9 171 80.7
A05p26180 Brassica napus HOM05D007759 ORTHO05D008318 3.9e-72 275.0 171 79.5
A04p16590 Brassica napus HOM05D007759 ORTHO05D008318 2.5e-71 272.3 171 78.9
A07p25500 Brassica napus HOM05D007759 ORTHO05D008318 3.3e-71 271.9 171 78.9
BcaC05g25628 Brassica carinata HOM05D007011 ORTHO05D008837 2.6e-68 262.3 171 75.4
A09p16180 Brassica napus HOM05D000305 ORTHO05D000065 1.6e-65 253.1 148 85.1
BraA09t37253Z Brassica rapa HOM05D000305 ORTHO05D000065 2.7e-65 252.3 148 85.1
BolC6t39668H Brassica oleracea HOM05D000305 ORTHO05D000065 1.5e-63 246.5 148 84.5
C02p60070 Brassica napus HOM05D000305 ORTHO05D000065 8.1e-62 240.7 148 82.4
C08p12830 Brassica napus HOM05D007759 ORTHO05D008318 2.1e-54 216.1 153 76.5
BcaB04g19215 Brassica carinata HOM05D007759 ORTHO05D008318 6.7e-48 194.5 157 62.4
C01p19090 Brassica napus HOM05D007759 ORTHO05D008318 3.8e-43 178.7 144 60.4
BolC6t36449H Brassica oleracea HOM05D007759 ORTHO05D008318 1.1e-42 177.2 144 60.4
BcaC02g11605 Brassica carinata HOM05D007759 ORTHO05D008318 1.9e-42 176.4 144 60.4
C04p13390 Brassica napus HOM05D007759 ORTHO05D008318 1.9e-42 176.4 144 60.4
BcaC02g10745 Brassica carinata HOM05D007759 ORTHO05D008318 2.4e-42 176.0 144 61.1
BcaC02g10768 Brassica carinata HOM05D007759 ORTHO05D008318 2.4e-42 176.0 141 61.7
BcaNung02441 Brassica carinata HOM05D007759 ORTHO05D008318 2.4e-42 176.0 161 57.1
C04p25320 Brassica napus HOM05D007759 ORTHO05D008318 2.4e-42 176.0 141 61.7
C04p25470 Brassica napus HOM05D007759 ORTHO05D008318 2.4e-42 176.0 144 61.1
BolC4t24065H Brassica oleracea HOM05D007759 ORTHO05D008318 2.4e-42 176.0 144 61.1
A07p09660 Brassica napus HOM05D007759 ORTHO05D008318 5.5e-42 174.9 162 55.6
A05p25410 Brassica napus HOM05D007759 ORTHO05D008318 3.5e-41 172.2 162 54.3
A09p61940 Brassica napus HOM05D007759 ORTHO05D008318 3.5e-41 172.2 162 54.9
A03p64890 Brassica napus HOM05D007759 ORTHO05D008318 1.3e-40 170.2 162 54.3
A05p45000 Brassica napus HOM05D007759 ORTHO05D008318 1.8e-40 169.9 162 54.3
BcaC05g28733 Brassica carinata HOM05D007759 ORTHO05D008318 2.3e-40 169.5 144 58.3
BolC5t33570H Brassica oleracea HOM05D007759 ORTHO05D008318 2.3e-40 169.5 144 58.3
BcaC04g21104 Brassica carinata HOM05D007759 ORTHO05D008318 1.5e-39 166.8 162 54.3
A09p35430 Brassica napus HOM05D007759 ORTHO05D008318 3.3e-39 165.6 144 57.6
BraA08t32106Z Brassica rapa HOM05D007759 ORTHO05D008318 3.3e-39 165.6 144 57.6
BcaC04g19163 Brassica carinata HOM05D007759 ORTHO05D008318 5.6e-39 164.9 145 59.3
C06p12950 Brassica napus HOM05D007759 ORTHO05D008318 7.4e-39 164.5 137 60.6
C09p35650 Brassica napus HOM05D007759 ORTHO05D008318 8.2e-38 161.0 151 56.3
BcaC05g27963 Brassica carinata HOM05D007759 ORTHO05D008318 1.4e-37 160.2 144 56.9
C01p11620 Brassica napus HOM05D007759 ORTHO05D008318 1.8e-37 159.8 156 54.5
BraA02t06461Z Brassica rapa HOM05D007759 ORTHO05D008318 1.5e-36 156.8 144 56.2
BcaC08g43908 Brassica carinata HOM05D007759 ORTHO05D008318 6.5e-35 151.4 124 61.3
BcaB02g07732 Brassica carinata HOM05D007759 ORTHO05D008318 3.2e-34 149.1 171 45.6
C09p64240 Brassica napus HOM05D007759 ORTHO05D008318 3.2e-34 149.1 127 60.6
BolC6t39089H Brassica oleracea HOM05D007759 ORTHO05D008318 3.2e-34 149.1 123 61.8
BolC9t59261H Brassica oleracea HOM05D007759 ORTHO05D008318 3.2e-34 149.1 127 60.6
BcaB01g03487 Brassica carinata HOM05D007759 ORTHO05D008318 5.5e-34 148.3 140 58.6
BcaB03g12128 Brassica carinata HOM05D007759 ORTHO05D008318 1.6e-33 146.7 140 57.9
A05p10430 Brassica napus HOM05D007759 ORTHO05D008318 2.1e-33 146.4 99 79.8
C01p16160 Brassica napus HOM05D007759 ORTHO05D008318 2.1e-33 146.4 122 62.3
BcaC09g50938 Brassica carinata HOM05D007759 ORTHO05D008318 4.6e-33 145.2 144 52.8
BcaB06g27974 Brassica carinata HOM05D000305 ORTHO05D000065 1.3e-32 143.7 146 52.7
BolC9t56401H Brassica oleracea HOM05D007759 ORTHO05D008318 1.8e-32 143.3 133 56.4
BraA03t13280Z Brassica rapa HOM05D007759 ORTHO05D008318 1.1e-31 140.6 126 54.8
BraA05t20148Z Brassica rapa HOM05D007759 ORTHO05D008318 1.5e-31 140.2 126 55.6
C03p87080 Brassica napus HOM05D007759 ORTHO05D008318 1.3e-30 137.1 119 59.7
BraA05t23159Z Brassica rapa HOM05D007759 ORTHO05D008318 6.3e-30 134.8 126 53.2
A09p55860 Brassica napus HOM05D007759 ORTHO05D008318 1.4e-29 133.7 120 58.3
BraA09t40989Z Brassica rapa HOM05D007759 ORTHO05D008318 1.4e-29 133.7 120 58.3
C05p36840 Brassica napus HOM05D000305 ORTHO05D008318 1.8e-29 133.3 171 40.9
BraA06t24735Z Brassica rapa HOM05D007759 ORTHO05D008318 3.1e-29 132.5 123 57.7
BcaC05g27701 Brassica carinata HOM05D007759 ORTHO05D008318 4.1e-29 132.1 171 40.9
BcaC09g51523 Brassica carinata HOM05D007759 ORTHO05D008318 1.5e-28 130.2 171 40.4
BraA03t15551Z Brassica rapa HOM05D007759 ORTHO05D008318 3.4e-28 129.0 123 56.9
BolC5t32424H Brassica oleracea HOM05D000305 ORTHO05D008318 5.9e-28 128.3 173 40.5
BolC5t31112H Brassica oleracea HOM05D007759 ORTHO05D008318 1.7e-27 126.7 102 59.8
A08p07380 Brassica napus HOM05D000305 ORTHO05D008318 2.9e-27 125.9 163 41.7
BcaB06g26374 Brassica carinata HOM05D007759 ORTHO05D008318 1.1e-26 124.0 109 57.8
BraA08t32755Z Brassica rapa HOM05D007759 ORTHO05D008318 1.1e-26 124.0 161 41.6
BolC1t01835H Brassica oleracea HOM05D007759 ORTHO05D008318 3.2e-26 122.5 101 60.4
BcaC04g21617 Brassica carinata HOM05D007759 ORTHO05D008318 1.6e-25 120.2 115 57.4
BcaC01g00595 Brassica carinata HOM05D007759 ORTHO05D008318 2.1e-25 119.8 126 49.2
C08p08060 Brassica napus HOM05D000313 ORTHO05D000065 1.8e-24 116.7 140 41.4
BolC8t47656H Brassica oleracea HOM05D000096 ORTHO05D000045 3.0e-24 115.9 140 41.4
BolC3t21010H Brassica oleracea HOM05D007759 ORTHO05D008318 5.1e-24 115.2 101 58.4
C01p16170 Brassica napus HOM05D007759 ORTHO05D008318 5.3e-21 105.1 120 52.5
BolC6t37317H Brassica oleracea HOM05D007759 ORTHO05D008318 1.3e-19 100.5 171 36.3
BcaC09g50078 Brassica carinata HOM05D000305 ORTHO05D000065 2.9e-19 99.4 156 39.1
BcaNung04086 Brassica carinata HOM05D007759 ORTHO05D008318 8.5e-19 97.8 84 61.9
BolC8t48618H Brassica oleracea HOM05D009716 ORTHO05D008318 1.6e-17 93.6 122 38.5
BraA04t15920Z Brassica rapa HOM05D009716 ORTHO05D008318 1.6e-17 93.6 120 38.3
BcaC05g27285 Brassica carinata HOM05D009716 ORTHO05D008318 3.0e-16 89.4 110 39.1
A06p29370 Brassica napus HOM05D007759 ORTHO05D008318 3.9e-16 89.0 92 52.2
BraA03t15217Z Brassica rapa HOM05D009716 ORTHO05D008318 3.9e-16 89.0 122 36.9
BcaB07g32952 Brassica carinata HOM05D007759 ORTHO05D008318 3.3e-15 85.9 56 75.0
BolC4t24039H Brassica oleracea HOM05D007759 ORTHO05D008318 3.3e-15 85.9 64 67.2
BolC7t43125H Brassica oleracea HOM05D009716 ORTHO05D008318 1.3e-14 84.0 110 39.1
A09p01240 Brassica napus HOM05D007759 ORTHO05D008318 3.7e-14 82.4 75 54.7
BraA01t01960Z Brassica rapa HOM05D009716 ORTHO05D008318 1.8e-13 80.1 101 39.6
Carub.0001s4072 Capsella rubella HOM05D007759 ORTHO05D008318 4.1e-13 79.0 154 31.2
Thhalv10002215m.g Eutrema salsugineum HOM05D007759 ORTHO05D008318 4.1e-13 79.0 147 31.3
Carub.0003s3131 Capsella rubella HOM05D007759 ORTHO05D008318 5.3e-13 78.6 154 31.8
BcaC01g00980 Brassica carinata HOM05D007759 ORTHO05D008318 9.1e-13 77.8 57 66.7
C05p39710 Brassica napus HOM05D007759 ORTHO05D008318 9.1e-13 77.8 90 46.7
BolC1t02858H Brassica oleracea HOM05D007759 ORTHO05D008318 9.1e-13 77.8 139 38.1
A08p19220 Brassica napus HOM05D007759 ORTHO05D008318 3.4e-12 75.9 65 60.0
BraA08t33884Z Brassica rapa HOM05D007759 ORTHO05D008318 3.4e-12 75.9 69 58.0
C01p29370 Brassica napus HOM05D000305 ORTHO05D000065 7.7e-12 74.7 139 37.4
AL4G17992 Arabidopsis lyrata HOM05D007759 ORTHO05D008318 1.0e-11 74.3 86 40.7
C01p29320 Brassica napus HOM05D000305 ORTHO05D000065 1.3e-11 73.9 152 36.8
BolC1t02876H Brassica oleracea HOM05D000305 ORTHO05D000065 1.3e-11 73.9 139 37.4
BcaC02g08813 Brassica carinata HOM05D009716 ORTHO05D008318 2.9e-11 72.8 86 41.9
BolC8t46859H Brassica oleracea HOM05D009716 ORTHO05D008318 5.5e-10 68.6 73 41.1
BcaB03g15150 Brassica carinata HOM05D009716 ORTHO05D008318 1.2e-09 67.4 114 28.9
BcaC09g48842 Brassica carinata HOM05D009716 ORTHO05D008318 1.0e-08 64.3 81 40.7
BcaB02g10590 Brassica carinata HOM05D007759 ORTHO05D008318 1.4e-08 63.9 73 47.9
BcaB06g26970 Brassica carinata HOM05D007759 ORTHO05D008318 1.8e-08 63.5 67 41.8
BcaC09g50072 Brassica carinata HOM05D007759 ORTHO05D008318 2.6e-07 59.7 73 46.6


User provided reference genes

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