Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g02197 Brassica carinata HOM05D003554 ORTHO05D014926 2.5e-165 585.5 327 100.0
BcaC01g01745 Brassica carinata HOM05D003554 ORTHO05D014926 9.5e-112 407.5 405 64.7
BcaC08g45828 Brassica carinata HOM05D003554 ORTHO05D014926 4.9e-92 342.0 418 57.2
BcaC08g45909 Brassica carinata HOM05D003554 ORTHO05D014926 4.0e-78 295.8 315 63.5
BcaC08g42899 Brassica carinata HOM05D003554 ORTHO05D005130 6.9e-78 295.0 185 87.6
BcaB06g26193 Brassica carinata HOM05D003554 ORTHO05D014926 2.6e-61 240.0 198 68.7
BcaC01g00316 Brassica carinata HOM05D003554 ORTHO05D014926 2.1e-50 203.8 174 64.9
BcaB08g35391 Brassica carinata HOM05D003554 ORTHO05D005130 2.8e-47 193.4 166 64.5
BcaC01g00119 Brassica carinata HOM05D003554 ORTHO05D014926 1.8e-38 164.1 159 61.6
BolC3t17148H Brassica oleracea HOM05D014471 ORTHO05D017646 4.2e-35 152.9 101 74.3
BcaC08g45195 Brassica carinata HOM05D003554 ORTHO05D014926 8.0e-34 148.7 232 47.4
BcaB02g10637 Brassica carinata HOM05D003554 ORTHO05D005130 1.8e-33 147.5 116 62.9
BcaB02g11423 Brassica carinata HOM05D003554 ORTHO05D014926 8.2e-31 138.7 101 67.3
BcaC07g37687 Brassica carinata HOM05D003554 ORTHO05D005130 3.2e-27 126.7 122 58.2
BcaB04g17603 Brassica carinata HOM05D003554 ORTHO05D096243 1.3e-23 114.8 327 39.1
BolC3t19531H Brassica oleracea HOM05D003554 ORTHO05D005130 1.7e-20 104.4 55 92.7
BraA09t38527Z Brassica rapa HOM05D003554 ORTHO05D014926 1.7e-20 104.4 128 60.9
C02p33250 Brassica napus HOM05D003554 ORTHO05D005130 2.9e-20 103.6 116 50.0
Carub.0003s2756 Capsella rubella HOM05D003554 ORTHO05D005130 5.0e-20 102.8 197 37.6
Carub.0003s3367 Capsella rubella HOM05D003554 ORTHO05D005130 6.5e-20 102.4 198 39.9
Carub.0006s2609 Capsella rubella HOM05D003554 ORTHO05D005130 1.1e-19 101.7 197 37.6
Carub.0001s3566 Capsella rubella HOM05D003554 ORTHO05D005130 7.2e-19 99.0 198 36.9
Carub.0002s0984 Capsella rubella HOM05D003554 ORTHO05D005130 7.2e-19 99.0 197 39.1
BcaC01g04644 Brassica carinata HOM05D003554 ORTHO05D093972 1.2e-18 98.2 73 79.5
Carub.0002s0983 Capsella rubella HOM05D003554 ORTHO05D005130 1.2e-18 98.2 124 45.2
BcaB02g10972 Brassica carinata HOM05D003554 ORTHO05D014926 4.7e-18 96.3 259 33.2
BcaB03g16128 Brassica carinata HOM05D003554 ORTHO05D005130 4.7e-18 96.3 192 38.0
Carub.0002s0995 Capsella rubella HOM05D003554 ORTHO05D005130 8.0e-18 95.5 181 37.6
Carub.0007s0014 Capsella rubella HOM05D003554 ORTHO05D005130 8.0e-18 95.5 197 36.5
Carub.0278s0001 Capsella rubella HOM05D003554 ORTHO05D005130 7.5e-16 89.0 198 33.8
BcaB02g10640 Brassica carinata HOM05D003554 ORTHO05D005130 9.8e-16 88.6 69 62.3
BcaB08g35293 Brassica carinata HOM05D003554 ORTHO05D005130 2.8e-15 87.0 206 35.9
BcaB06g26918 Brassica carinata HOM05D003554 ORTHO05D024382 1.6e-13 81.3 57 80.7
C01p07300 Brassica napus HOM05D003554 ORTHO05D014926 1.6e-13 81.3 52 82.7
AL1G56530 Arabidopsis lyrata HOM05D003554 ORTHO05D005130 1.0e-12 78.6 117 41.0
AL1G56540 Arabidopsis lyrata HOM05D003554 ORTHO05D005130 1.0e-12 78.6 117 41.0
BcaB02g11541 Brassica carinata HOM05D003554 ORTHO05D005130 1.3e-12 78.2 193 34.7
BcaC03g13667 Brassica carinata HOM05D007984 ORTHO05D039917 1.7e-12 77.8 252 32.5
BcaB04g17410 Brassica carinata HOM05D003554 ORTHO05D005130 6.6e-12 75.9 199 32.7
BcaB07g32749 Brassica carinata HOM05D008316 ORTHO05D013031 1.5e-11 74.7 126 41.3
BcaB07g33249 Brassica carinata HOM05D026233 ORTHO05D005130 1.5e-11 74.7 159 37.7
BcaC03g16254 Brassica carinata HOM05D003554 ORTHO05D005130 1.5e-11 74.7 186 33.9
BcaB08g35153 Brassica carinata HOM05D007984 ORTHO05D013027 1.9e-11 74.3 200 34.0
BcaC08g42812 Brassica carinata HOM05D008825 ORTHO05D013031 1.9e-11 74.3 134 39.6
BcaB08g35337 Brassica carinata HOM05D003554 ORTHO05D005130 2.5e-11 73.9 124 41.1
BcaB02g11452 Brassica carinata HOM05D003554 ORTHO05D093505 3.3e-11 73.6 47 83.0
BcaB06g26180 Brassica carinata HOM05D009532 ORTHO05D005130 5.6e-11 72.8 134 36.6
C02p57980 Brassica napus HOM05D017905 ORTHO05D017243 1.2e-10 71.6 122 36.9
Aa31LG10G9040 Aethionema arabicum HOM05D003554 ORTHO05D005130 1.6e-10 71.2 163 31.9
BcaB01g01280 Brassica carinata HOM05D003554 ORTHO05D005130 1.6e-10 71.2 192 32.3
C09p54080 Brassica napus HOM05D000628 ORTHO05D011672 2.1e-10 70.9 36 94.4
BcaC05g27750 Brassica carinata HOM05D008825 ORTHO05D013031 2.8e-10 70.5 134 38.8
Aa31LG10G9030 Aethionema arabicum HOM05D003554 ORTHO05D008395 3.6e-10 70.1 195 29.2
BcaB03g16082 Brassica carinata HOM05D026233 ORTHO05D005130 3.6e-10 70.1 57 63.2
C05p37400 Brassica napus HOM05D003554 ORTHO05D005130 4.7e-10 69.7 123 39.0
Aa31sc129G60 Aethionema arabicum HOM05D003554 ORTHO05D005130 8.0e-10 68.9 191 29.8
BcaB08g34926 Brassica carinata HOM05D007984 ORTHO05D013027 8.0e-10 68.9 199 32.2
BcaC03g17046 Brassica carinata HOM05D003554 ORTHO05D039837 1.0e-09 68.6 134 35.1
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 1.8e-09 67.8 207 29.0
BcaB02g11458 Brassica carinata HOM05D007984 ORTHO05D013027 5.2e-09 66.2 110 41.8
BcaB01g01146 Brassica carinata HOM05D003554 ORTHO05D005130 1.5e-08 64.7 139 33.1
BcaB02g11054 Brassica carinata HOM05D009532 ORTHO05D005130 2.0e-08 64.3 114 36.8
BcaC01g04710 Brassica carinata HOM05D008825 ORTHO05D013031 2.6e-08 63.9 192 29.7
BcaB03g16422 Brassica carinata HOM05D007984 ORTHO05D013027 5.7e-08 62.8 196 31.6
BcaB07g32849 Brassica carinata HOM05D007984 ORTHO05D013027 9.8e-08 62.0 119 38.7
BcaC05g27358 Brassica carinata HOM05D003554 ORTHO05D014926 1.3e-07 61.6 142 31.0
C04p23890 Brassica napus HOM05D004128 ORTHO05D008395 1.3e-07 61.6 116 31.9
BolC2t07485H Brassica oleracea HOM05D003554 ORTHO05D024382 1.7e-07 61.2 48 75.0
BcaB02g11366 Brassica carinata HOM05D007984 ORTHO05D013027 2.2e-07 60.8 126 38.1
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 2.2e-07 60.8 207 28.0
BraA02t08178Z Brassica rapa HOM05D003554 ORTHO05D024382 2.9e-07 60.5 48 75.0
BcaC08g43125 Brassica carinata HOM05D009532 ORTHO05D013511 4.9e-07 59.7 233 26.6
BolC8t50772H Brassica oleracea HOM05D004128 ORTHO05D008395 6.4e-07 59.3 116 30.2
C02p40540 Brassica napus HOM05D007984 ORTHO05D014515 8.3e-07 58.9 167 32.3
BraA07t28794Z Brassica rapa HOM05D003554 ORTHO05D024382 8.3e-07 58.9 36 83.3
BraA10t42724Z Brassica rapa HOM05D004128 ORTHO05D008395 8.3e-07 58.9 116 31.0
BolC4t23069H Brassica oleracea HOM05D003554 ORTHO05D024382 1.1e-06 58.5 36 83.3
C07p34800 Brassica napus HOM05D004128 ORTHO05D008395 1.8e-06 57.8 116 30.2
BraA05t20993Z Brassica rapa HOM05D004128 ORTHO05D008395 1.8e-06 57.8 140 29.3
BolC9t56577H Brassica oleracea HOM05D004128 ORTHO05D008395 2.4e-06 57.4 92 37.0
C01p25840 Brassica napus HOM05D004128 ORTHO05D008395 4.1e-06 56.6 116 30.2
BcaB04g18306 Brassica carinata HOM05D007984 ORTHO05D013027 5.4e-06 56.2 173 32.9
BcaB04g17902 Brassica carinata HOM05D003554 ORTHO05D005130 7.0e-06 55.8 55 54.5
BcaC04g20884 Brassica carinata HOM05D009532 ORTHO05D013511 7.0e-06 55.8 228 28.5
BolC9t55613H Brassica oleracea HOM05D004128 ORTHO05D008395 9.2e-06 55.5 116 28.4


User provided reference genes

Program Settings