Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g02194 Brassica carinata HOM05D017411 ORTHO05D011246 1.1e-150 536.6 273 100.0
BcaC07g37465 Brassica carinata HOM05D017411 ORTHO05D011246 1.4e-87 327.0 245 73.1
BcaC01g01959 Brassica carinata HOM05D017411 ORTHO05D011246 1.2e-72 277.3 198 74.2
BcaC04g20881 Brassica carinata HOM05D017411 ORTHO05D011246 3.6e-64 249.2 163 77.3
BcaC06g35662 Brassica carinata HOM05D017411 ORTHO05D011246 1.7e-45 187.2 171 56.7
BolC9t56661H Brassica oleracea HOM05D017411 ORTHO05D011246 1.0e-18 98.2 56 82.1
BolC7t41349H Brassica oleracea HOM05D018935 ORTHO05D011246 1.4e-15 87.8 114 39.5
BcaC09g49833 Brassica carinata HOM05D018935 ORTHO05D011246 5.3e-15 85.9 167 31.7
BcaC04g20901 Brassica carinata HOM05D018935 ORTHO05D011246 1.2e-14 84.7 202 30.2
BcaC06g35957 Brassica carinata HOM05D017411 ORTHO05D011246 1.7e-13 80.9 97 38.1
C02p58750 Brassica napus HOM05D011724 ORTHO05D011246 3.2e-12 76.6 104 38.5
BolC2t07389H Brassica oleracea HOM05D011724 ORTHO05D011246 4.2e-12 76.3 104 37.5
BolC3t20818H Brassica oleracea HOM05D011724 ORTHO05D011246 9.3e-12 75.1 104 38.5
Sp3g25250 Schrenkiella parvula HOM05D011724 ORTHO05D011246 4.6e-11 72.8 176 30.1
Sp4g07820 Schrenkiella parvula HOM05D009295 ORTHO05D000016 4.6e-11 72.8 269 24.5
BolC7t41461H Brassica oleracea HOM05D009298 ORTHO05D011246 6.1e-11 72.4 82 40.2
BolC9t55293H Brassica oleracea HOM05D013925 ORTHO05D039918 1.8e-10 70.9 83 38.6
BcaC02g10752 Brassica carinata HOM05D018935 ORTHO05D011246 2.5e-09 67.0 144 28.5
BcaC06g36190 Brassica carinata HOM05D018935 ORTHO05D011246 3.3e-09 66.6 140 30.7
Sp6g11730 Schrenkiella parvula HOM05D011724 ORTHO05D011246 9.7e-09 65.1 109 37.6
Aa31sc25G80 Aethionema arabicum HOM05D011724 ORTHO05D011246 2.2e-08 63.9 170 30.0
Sp6g11410 Schrenkiella parvula HOM05D011724 ORTHO05D011246 2.2e-08 63.9 95 38.9
BraA08t32570Z Brassica rapa HOM05D013925 ORTHO05D017512 3.7e-08 63.2 77 33.8
BraA02t07723Z Brassica rapa HOM05D017411 ORTHO05D011246 6.3e-08 62.4 77 44.2
Sp5g18740 Schrenkiella parvula HOM05D011724 ORTHO05D011246 1.8e-07 60.8 198 26.8
BcaC01g02143 Brassica carinata HOM05D018935 ORTHO05D011246 2.4e-07 60.5 138 28.3
THA.LOC104805010 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 9.0e-07 58.5 158 29.1
THA.LOC104809177 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 1.2e-06 58.2 95 38.9
Aa31sc506G10 Aethionema arabicum HOM05D009674 ORTHO05D000016 3.4e-06 56.6 101 30.7
THA.LOC104808007 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 4.5e-06 56.2 119 31.1
THA.LOC104801623 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 5.9e-06 55.8 91 33.0
THA.LOC104801904 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 5.9e-06 55.8 165 29.1
THA.LOC104801906 Tarenaya hassleriana HOM05D000014 ORTHO05D000093 5.9e-06 55.8 165 29.1
THA.LOC104803157 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 5.9e-06 55.8 165 29.1
THA.LOC109116024 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 5.9e-06 55.8 165 29.1
THA.LOC109116178 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 5.9e-06 55.8 165 29.1
BolC9t56252H Brassica oleracea HOM05D009295 ORTHO05D033801 7.7e-06 55.5 126 33.3
Oeu031405.1 Olea europaea HOM05D000014 ORTHO05D000016 7.7e-06 55.5 188 24.5
THA.LOC104809785 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 7.7e-06 55.5 207 21.3
THA.LOC104815198 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 1.0e-05 55.1 140 25.0
THA.LOC104825823 Tarenaya hassleriana HOM05D000014 ORTHO05D000016 1.0e-05 55.1 79 32.9


User provided reference genes

Program Settings