Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g02185 Brassica carinata HOM05D000496 ORTHO05D000411 3.8e-35 151.0 77 100.0
BcaC04g19988 Brassica carinata HOM05D000496 ORTHO05D000411 6.9e-29 130.2 73 87.7
BcaC04g20907 Brassica carinata HOM05D000496 ORTHO05D000411 6.5e-27 123.6 73 83.6
C09p38100 Brassica napus HOM05D000496 ORTHO05D000411 6.5e-27 123.6 73 83.6
BolC9t56646H Brassica oleracea HOM05D000496 ORTHO05D000411 6.5e-27 123.6 73 83.6
BcaC03g16633 Brassica carinata HOM05D000496 ORTHO05D000411 4.6e-17 90.9 51 86.3
BcaB03g16449 Brassica carinata HOM05D000496 ORTHO05D000411 6.3e-14 80.5 69 65.2
BcaB05g23634 Brassica carinata HOM05D000496 ORTHO05D000411 3.1e-13 78.2 69 62.3
BcaC04g20747 Brassica carinata HOM05D000496 ORTHO05D000411 4.1e-13 77.8 69 62.3
BcaC04g20748 Brassica carinata HOM05D000496 ORTHO05D000411 4.1e-13 77.8 69 62.3
BcaC02g11190 Brassica carinata HOM05D000496 ORTHO05D031866 6.9e-13 77.0 69 60.9
BcaC05g27057 Brassica carinata HOM05D000625 ORTHO05D000467 2.0e-12 75.5 69 60.9
BcaC06g34940 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-12 75.5 69 60.9
BcaC07g37384 Brassica carinata HOM05D000496 ORTHO05D015464 1.3e-11 72.8 71 59.2
A09p25190 Brassica napus HOM05D000496 ORTHO05D024139 1.3e-11 72.8 75 57.3
BraA05t22059Z Brassica rapa HOM05D000496 ORTHO05D024139 1.3e-11 72.8 75 57.3
BcaC07g37489 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-10 69.7 68 58.8
BolC9t58039H Brassica oleracea HOM05D000496 ORTHO05D024139 1.1e-10 69.7 75 56.0
BcaC03g16876 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-10 68.6 71 57.7
BcaB01g01424 Brassica carinata HOM05D000496 ORTHO05D000411 4.2e-10 67.8 72 52.8
BcaC03g15779 Brassica carinata HOM05D001075 ORTHO05D001779 4.2e-10 67.8 71 54.9
BcaB05g22924 Brassica carinata HOM05D000496 ORTHO05D000411 5.5e-10 67.4 69 55.1
BcaC01g01334 Brassica carinata HOM05D000496 ORTHO05D031866 2.1e-09 65.5 69 50.7
BolC5t32326H Brassica oleracea HOM05D000496 ORTHO05D032758 3.6e-09 64.7 72 50.0
BcaC05g27615 Brassica carinata HOM05D000496 ORTHO05D032758 4.6e-09 64.3 75 49.3
BcaC06g35367 Brassica carinata HOM05D000496 ORTHO05D000411 4.6e-09 64.3 71 52.1
BcaC06g36595 Brassica carinata HOM05D000496 ORTHO05D000411 4.6e-09 64.3 74 54.1
BcaC03g16547 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-08 63.2 76 47.4
BcaC02g10623 Brassica carinata HOM05D003757 ORTHO05D004892 1.8e-08 62.4 79 45.6
BcaC06g35199 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-08 62.0 76 47.4
BcaC03g16259 Brassica carinata HOM05D000496 ORTHO05D000166 3.0e-08 61.6 74 48.6
BcaC04g20746 Brassica carinata HOM05D011171 ORTHO05D000411 3.0e-08 61.6 76 46.1
C05p36020 Brassica napus HOM05D000496 ORTHO05D000411 3.0e-08 61.6 72 48.6
BcaC05g27332 Brassica carinata HOM05D000048 ORTHO05D000411 5.1e-08 60.8 72 55.6
BcaC04g21026 Brassica carinata HOM05D045545 ORTHO05D039694 6.7e-08 60.5 70 52.9
BcaC03g16322 Brassica carinata HOM05D000496 ORTHO05D000411 8.8e-08 60.1 76 46.1
BcaC07g37689 Brassica carinata HOM05D000496 ORTHO05D000411 8.8e-08 60.1 71 49.3
BcaC04g20777 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-07 59.3 69 50.7
C09p39390 Brassica napus HOM05D000496 ORTHO05D000411 1.5e-07 59.3 69 50.7
BolC9t56812H Brassica oleracea HOM05D000496 ORTHO05D000411 1.5e-07 59.3 69 50.7
BcaC02g10431 Brassica carinata HOM05D000496 ORTHO05D092068 2.0e-07 58.9 79 44.3
BcaB05g23868 Brassica carinata HOM05D000496 ORTHO05D016019 2.6e-07 58.5 70 51.4
BcaC09g49845 Brassica carinata HOM05D000496 ORTHO05D000411 2.6e-07 58.5 71 46.5
BolC9t55287H Brassica oleracea HOM05D000496 ORTHO05D000411 2.6e-07 58.5 76 43.4
BcaC01g02355 Brassica carinata HOM05D000496 ORTHO05D000411 3.3e-07 58.2 71 46.5
BcaB08g35431 Brassica carinata HOM05D000496 ORTHO05D000411 4.4e-07 57.8 72 48.6
BcaC07g37354 Brassica carinata HOM05D000496 ORTHO05D000411 5.7e-07 57.4 73 52.1
BcaC08g43573 Brassica carinata HOM05D000496 ORTHO05D000411 7.4e-07 57.0 74 43.2
BcaC02g10608 Brassica carinata HOM05D000496 ORTHO05D000411 9.7e-07 56.6 72 47.2
BcaC09g50410 Brassica carinata HOM05D000496 ORTHO05D000411 9.7e-07 56.6 73 49.3
BcaC06g35802 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-06 56.2 75 44.0
BcaC02g11189 Brassica carinata HOM05D000496 ORTHO05D011778 2.8e-06 55.1 73 45.2
BcaC03g14287 Brassica carinata HOM05D000496 ORTHO05D000411 2.8e-06 55.1 73 49.3
BcaB01g05842 Brassica carinata HOM05D000496 ORTHO05D000411 4.8e-06 54.3 58 56.9
BcaC04g21077 Brassica carinata HOM05D000496 ORTHO05D000411 4.8e-06 54.3 72 47.2
BcaC08g43794 Brassica carinata HOM05D000496 ORTHO05D000411 6.3e-06 53.9 68 42.6
BcaC08g45526 Brassica carinata HOM05D000496 ORTHO05D000411 6.3e-06 53.9 71 43.7
C06p19990 Brassica napus HOM05D000496 ORTHO05D000411 6.3e-06 53.9 77 42.9
BcaC03g16224 Brassica carinata HOM05D000496 ORTHO05D000411 8.2e-06 53.5 71 45.1
BcaC06g36009 Brassica carinata HOM05D000496 ORTHO05D027068 8.2e-06 53.5 67 46.3


User provided reference genes

Program Settings