Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g02183 Brassica carinata HOM05D000977 ORTHO05D001094 7.9e-42 173.3 86 100.0
BcaC04g20473 Brassica carinata HOM05D000977 ORTHO05D001094 3.5e-37 157.9 89 89.9
BcaC08g43895 Brassica carinata HOM05D000977 ORTHO05D001094 1.0e-33 146.4 89 84.3
BcaB01g00468 Brassica carinata HOM05D000977 ORTHO05D001094 3.0e-33 144.8 89 84.3
BolC6t36171H Brassica oleracea HOM05D000977 ORTHO05D001094 8.8e-33 143.3 82 87.8
BolC9t57183H Brassica oleracea HOM05D000977 ORTHO05D001094 2.0e-32 142.1 82 86.6
BolC4t25105H Brassica oleracea HOM05D000977 ORTHO05D001094 3.3e-32 141.4 82 86.6
BolC4t27566H Brassica oleracea HOM05D000977 ORTHO05D001094 4.4e-32 141.0 82 86.6
BraA04t16482Z Brassica rapa HOM05D000977 ORTHO05D001094 7.4e-32 140.2 82 86.6
BcaB01g02038 Brassica carinata HOM05D000977 ORTHO05D001094 1.1e-30 136.3 89 78.7
BcaB01g02058 Brassica carinata HOM05D000977 ORTHO05D001094 1.1e-30 136.3 87 78.2
BcaNung05005 Brassica carinata HOM05D000977 ORTHO05D001094 1.1e-30 136.3 89 78.7
BolC6t36562H Brassica oleracea HOM05D000977 ORTHO05D001094 1.6e-29 132.5 73 87.7
C09p43120 Brassica napus HOM05D000977 ORTHO05D001094 6.3e-23 110.5 63 87.3
BolC7t41539H Brassica oleracea HOM05D000977 ORTHO05D001094 6.3e-23 110.5 81 69.1
BolC8t47282H Brassica oleracea HOM05D000977 ORTHO05D001094 5.3e-22 107.5 82 64.6
BolC9t55635H Brassica oleracea HOM05D000977 ORTHO05D001094 5.3e-22 107.5 82 64.6
BraA10t43802Z Brassica rapa HOM05D000977 ORTHO05D001094 5.3e-22 107.5 82 64.6
BolC1t04517H Brassica oleracea HOM05D000977 ORTHO05D001094 1.2e-16 89.7 70 64.3
BcaB03g14367 Brassica carinata HOM05D000977 ORTHO05D001094 3.1e-14 81.6 76 48.7
BcaC06g35365 Brassica carinata HOM05D000977 ORTHO05D001094 3.1e-14 81.6 76 48.7
BcaC09g49808 Brassica carinata HOM05D000977 ORTHO05D001094 3.1e-14 81.6 76 48.7
BcaC09g51271 Brassica carinata HOM05D000977 ORTHO05D001094 3.1e-14 81.6 76 48.7
A04p14250 Brassica napus HOM05D000977 ORTHO05D001094 3.1e-14 81.6 48 83.3
BolC1t04278H Brassica oleracea HOM05D000977 ORTHO05D001094 3.1e-14 81.6 76 48.7
BcaC05g27350 Brassica carinata HOM05D000977 ORTHO05D001094 1.2e-13 79.7 76 48.7
BcaC07g37297 Brassica carinata HOM05D000977 ORTHO05D001094 3.5e-13 78.2 76 47.4
BolC5t31094H Brassica oleracea HOM05D000977 ORTHO05D001094 3.5e-13 78.2 76 44.7
BraA04t17395Z Brassica rapa HOM05D000977 ORTHO05D001094 3.5e-13 78.2 41 92.7
BcaC09g50384 Brassica carinata HOM05D000977 ORTHO05D001094 4.5e-13 77.8 75 46.7
BcaC09g50525 Brassica carinata HOM05D000977 ORTHO05D001094 4.5e-13 77.8 76 46.1
BcaC02g10149 Brassica carinata HOM05D000977 ORTHO05D001094 1.0e-12 76.6 77 45.5
AL1G57050 Arabidopsis lyrata HOM05D000977 ORTHO05D001094 1.3e-12 76.3 69 50.7
AL3G51940 Arabidopsis lyrata HOM05D000977 ORTHO05D001094 1.3e-12 76.3 67 52.2
AL5G16890 Arabidopsis lyrata HOM05D000977 ORTHO05D001094 1.7e-12 75.9 69 50.7
BcaB06g29622 Brassica carinata HOM05D000977 ORTHO05D001094 1.7e-12 75.9 76 43.4
BolC5t32181H Brassica oleracea HOM05D000977 ORTHO05D001094 1.7e-12 75.9 77 45.5
BolC9t55864H Brassica oleracea HOM05D000977 ORTHO05D001094 1.7e-12 75.9 69 46.4
AL5G27080 Arabidopsis lyrata HOM05D000977 ORTHO05D001094 2.3e-12 75.5 69 49.3
BolC9t54905H Brassica oleracea HOM05D000977 ORTHO05D001094 2.9e-12 75.1 69 56.5
AL1G58560 Arabidopsis lyrata HOM05D000977 ORTHO05D001094 3.8e-12 74.7 69 49.3
AL1G58670 Arabidopsis lyrata HOM05D000977 ORTHO05D001094 3.8e-12 74.7 69 49.3
BcaC06g36215 Brassica carinata HOM05D000977 ORTHO05D001094 8.6e-12 73.6 77 44.2
BcaC07g36913 Brassica carinata HOM05D000977 ORTHO05D001094 8.6e-12 73.6 75 44.0
BolC5t33624H Brassica oleracea HOM05D000977 ORTHO05D001094 8.6e-12 73.6 76 44.7
Carub.0007s3164 Capsella rubella HOM05D000977 ORTHO05D001094 8.6e-12 73.6 70 44.3
AL1G30000 Arabidopsis lyrata HOM05D000977 ORTHO05D001094 1.1e-11 73.2 69 49.3
BolC9t57660H Brassica oleracea HOM05D000977 ORTHO05D001094 1.1e-11 73.2 77 44.2
BraA09t38605Z Brassica rapa HOM05D000977 ORTHO05D001094 1.1e-11 73.2 79 43.0
BcaC08g43606 Brassica carinata HOM05D000977 ORTHO05D001094 1.5e-11 72.8 76 43.4
BolC2t11220H Brassica oleracea HOM05D000977 ORTHO05D001094 1.5e-11 72.8 69 44.9
BolC6t36478H Brassica oleracea HOM05D000977 ORTHO05D001094 1.9e-11 72.4 69 46.4
AL4G19794 Arabidopsis lyrata HOM05D000977 ORTHO05D001094 2.5e-11 72.0 70 48.6
BcaC02g09848 Brassica carinata HOM05D000977 ORTHO05D001094 2.5e-11 72.0 77 42.9
BcaC08g44528 Brassica carinata HOM05D000977 ORTHO05D001094 3.3e-11 71.6 77 46.8
BolC6t38698H Brassica oleracea HOM05D000977 ORTHO05D001094 3.3e-11 71.6 69 46.4
BcaB08g35649 Brassica carinata HOM05D000977 ORTHO05D001094 7.2e-11 70.5 75 41.3
BcaC08g45436 Brassica carinata HOM05D000977 ORTHO05D001094 9.5e-11 70.1 69 43.5
BcaB08g35410 Brassica carinata HOM05D000977 ORTHO05D001094 1.6e-10 69.3 79 40.5
Thhalv10002232m.g Eutrema salsugineum HOM05D000977 ORTHO05D001094 3.6e-10 68.2 76 43.4
BolC7t40988H Brassica oleracea HOM05D000977 ORTHO05D001094 6.1e-10 67.4 79 40.5
C06p12800 Brassica napus HOM05D000977 ORTHO05D001094 8.0e-10 67.0 73 53.4
BolC6t36440H Brassica oleracea HOM05D000977 ORTHO05D001094 1.8e-09 65.9 73 52.1
AL8G14210 Arabidopsis lyrata HOM05D000977 ORTHO05D001094 4.0e-09 64.7 71 40.8
BolC3t15821H Brassica oleracea HOM05D000977 ORTHO05D001094 8.9e-09 63.5 79 39.2
BcaC04g21434 Brassica carinata HOM05D000977 ORTHO05D001094 1.2e-08 63.2 70 44.3
Thhalv10000524m.g Eutrema salsugineum HOM05D000977 ORTHO05D001094 2.0e-08 62.4 69 42.0
Thhalv10000674m.g Eutrema salsugineum HOM05D000977 ORTHO05D001094 2.0e-08 62.4 69 42.0
BcaC07g37010 Brassica carinata HOM05D000977 ORTHO05D001094 2.6e-08 62.0 70 44.3
BolC2t08846H Brassica oleracea HOM05D000977 ORTHO05D001094 2.6e-08 62.0 79 38.0
BolC5t31468H Brassica oleracea HOM05D000977 ORTHO05D001094 3.4e-08 61.6 70 41.4
BcaC03g16184 Brassica carinata HOM05D000977 ORTHO05D001094 5.7e-08 60.8 70 42.9
BcaC08g46177 Brassica carinata HOM05D000977 ORTHO05D001094 1.3e-07 59.7 79 36.7
BolC1t02514H Brassica oleracea HOM05D000977 ORTHO05D001094 1.3e-07 59.7 63 38.1
Carub.0008s0688 Capsella rubella HOM05D000977 ORTHO05D001094 1.3e-07 59.7 77 37.7
Carub.0002s0947 Capsella rubella HOM05D000977 ORTHO05D001094 1.7e-07 59.3 77 37.7
BraA07t28145Z Brassica rapa HOM05D000977 ORTHO05D001094 2.8e-07 58.5 54 44.4
BcaC08g44291 Brassica carinata HOM05D000977 ORTHO05D001094 4.9e-07 57.8 69 43.5
BolC6t36539H Brassica oleracea HOM05D000977 ORTHO05D001094 4.9e-07 57.8 70 38.6
BolC9t54029H Brassica oleracea HOM05D000977 ORTHO05D001094 4.9e-07 57.8 70 38.6
BcaB07g32894 Brassica carinata HOM05D000977 ORTHO05D001094 6.3e-07 57.4 76 36.8
BcaC05g28638 Brassica carinata HOM05D000977 ORTHO05D001094 6.3e-07 57.4 70 41.4
BcaC05g27348 Brassica carinata HOM05D000977 ORTHO05D001094 8.3e-07 57.0 70 40.0
BcaC04g21808 Brassica carinata HOM05D000977 ORTHO05D001094 1.4e-06 56.2 70 42.9
BolC8t47989H Brassica oleracea HOM05D000977 ORTHO05D001094 1.8e-06 55.8 69 37.7
BraA04t16886Z Brassica rapa HOM05D000977 ORTHO05D001094 3.1e-06 55.1 60 40.0
BcaC02g12311 Brassica carinata HOM05D000977 ORTHO05D001094 4.1e-06 54.7 77 36.4
BolC3t19005H Brassica oleracea HOM05D000977 ORTHO05D039581 4.1e-06 54.7 77 33.8


User provided reference genes

Program Settings