Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g02132 Brassica carinata HOM05D006121 ORTHO05D009559 6.7e-142 507.3 247 100.0
BcaC07g37147 Brassica carinata HOM05D006121 ORTHO05D009559 2.8e-116 422.2 246 84.1
BcaC09g49299 Brassica carinata HOM05D006121 ORTHO05D009559 4.8e-108 394.8 246 82.1
BcaC01g06835 Brassica carinata HOM05D006121 ORTHO05D009559 3.8e-105 385.2 246 80.5
BcaC08g42951 Brassica carinata HOM05D006121 ORTHO05D009559 7.2e-104 380.9 247 75.7
BcaC05g27793 Brassica carinata HOM05D006121 ORTHO05D009559 2.8e-100 369.0 248 73.4
BcaC05g27675 Brassica carinata HOM05D006121 ORTHO05D009559 4.8e-100 368.2 245 74.7
BcaC02g11248 Brassica carinata HOM05D006121 ORTHO05D009559 2.0e-93 346.3 240 71.7
BcaC02g11960 Brassica carinata HOM05D006121 ORTHO05D009559 3.2e-88 328.9 245 70.6
BcaC09g49745 Brassica carinata HOM05D006121 ORTHO05D009559 6.1e-71 271.6 211 62.6
BcaC05g28468 Brassica carinata HOM05D006121 ORTHO05D009559 2.4e-67 259.6 177 72.9
BolC3t20163H Brassica oleracea HOM05D006121 ORTHO05D009559 1.6e-66 256.9 249 56.6
BcaC09g49729 Brassica carinata HOM05D006121 ORTHO05D009559 3.5e-66 255.8 202 61.4
BcaC08g43580 Brassica carinata HOM05D006121 ORTHO05D009559 1.5e-64 250.4 150 81.3
BcaC03g16521 Brassica carinata HOM05D006121 ORTHO05D009559 9.5e-64 247.7 218 55.5
BcaC04g21502 Brassica carinata HOM05D006121 ORTHO05D009559 1.6e-63 246.9 209 56.9
BcaC02g09767 Brassica carinata HOM05D006121 ORTHO05D009559 1.4e-62 243.8 174 70.7
BcaC03g16486 Brassica carinata HOM05D006121 ORTHO05D009559 5.4e-59 231.9 177 66.7
BcaC06g36167 Brassica carinata HOM05D006121 ORTHO05D009559 1.0e-57 227.6 149 74.5
BcaC05g28043 Brassica carinata HOM05D006121 ORTHO05D009559 3.9e-57 225.7 177 65.5
BcaC03g15130 Brassica carinata HOM05D006121 ORTHO05D009559 2.7e-50 203.0 209 45.0
BcaC04g20823 Brassica carinata HOM05D006121 ORTHO05D009559 1.0e-49 201.1 147 72.1
BcaC04g23210 Brassica carinata HOM05D006121 ORTHO05D009559 1.5e-48 197.2 235 42.1
BcaC03g15126 Brassica carinata HOM05D006121 ORTHO05D009559 4.7e-47 192.2 146 69.9
BcaC06g36507 Brassica carinata HOM05D006121 ORTHO05D009559 4.7e-47 192.2 208 44.7
BcaC07g37265 Brassica carinata HOM05D006121 ORTHO05D009559 5.8e-45 185.3 110 82.7
BcaC03g17371 Brassica carinata HOM05D006121 ORTHO05D009559 7.1e-43 178.3 172 48.3
BcaC04g20762 Brassica carinata HOM05D006121 ORTHO05D009559 7.8e-42 174.9 218 40.4
BcaC02g10718 Brassica carinata HOM05D006121 ORTHO05D009559 1.3e-41 174.1 93 88.2
BcaC05g27433 Brassica carinata HOM05D006121 ORTHO05D009559 3.0e-41 172.9 181 48.1
BcaC06g35841 Brassica carinata HOM05D006121 ORTHO05D009559 3.9e-41 172.6 110 73.6
BcaC01g02238 Brassica carinata HOM05D006121 ORTHO05D009559 6.6e-41 171.8 175 48.0
BcaC07g37897 Brassica carinata HOM05D006121 ORTHO05D009559 6.6e-41 171.8 203 41.9
BcaC03g16227 Brassica carinata HOM05D006121 ORTHO05D009559 2.1e-39 166.8 218 40.8
BcaC04g22047 Brassica carinata HOM05D006121 ORTHO05D009559 8.1e-39 164.9 91 90.1
BcaC01g05819 Brassica carinata HOM05D006121 ORTHO05D009559 3.1e-38 162.9 246 37.8
BcaC08g43032 Brassica carinata HOM05D006121 ORTHO05D009559 5.3e-38 162.2 91 89.0
Carub.0003s2904 Capsella rubella HOM05D006121 ORTHO05D009559 1.4e-35 154.1 235 36.6
BcaC03g16371 Brassica carinata HOM05D006121 ORTHO05D009559 5.4e-35 152.1 172 44.2
BcaC07g37903 Brassica carinata HOM05D006121 ORTHO05D009559 3.5e-34 149.4 227 37.4
BcaC03g15125 Brassica carinata HOM05D006121 ORTHO05D009559 4.6e-34 149.1 91 83.5
BcaC08g42838 Brassica carinata HOM05D006121 ORTHO05D009559 1.0e-33 147.9 91 72.5
BcaC04g22048 Brassica carinata HOM05D006121 ORTHO05D009559 8.7e-33 144.8 81 85.2
BcaC01g00176 Brassica carinata HOM05D006121 ORTHO05D009559 4.8e-31 139.0 82 76.8
BolC7t41498H Brassica oleracea HOM05D006121 ORTHO05D009559 3.4e-29 132.9 160 41.2
BraA09t38607Z Brassica rapa HOM05D006121 ORTHO05D009559 3.4e-29 132.9 149 43.0
BcaC09g50206 Brassica carinata HOM05D006121 ORTHO05D009559 1.3e-28 131.0 115 59.1
BcaC03g15823 Brassica carinata HOM05D006121 ORTHO05D009559 2.2e-28 130.2 115 58.3
BcaC08g43697 Brassica carinata HOM05D006121 ORTHO05D009559 4.6e-26 122.5 73 78.1
BraA06t25079Z Brassica rapa HOM05D006121 ORTHO05D009559 1.0e-25 121.3 121 43.0
C05p29190 Brassica napus HOM05D006121 ORTHO05D009559 2.5e-24 116.7 102 52.0
BolC9t56759H Brassica oleracea HOM05D006121 ORTHO05D009559 5.6e-24 115.5 102 51.0
AL1G61970 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 7.4e-24 115.2 208 30.8
AL8G20450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.3e-23 114.4 208 30.3
AL8G45410 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.6e-23 114.0 208 30.3
BcaC04g20594 Brassica carinata HOM05D006121 ORTHO05D009559 1.6e-23 114.0 183 35.0
AL2G23360 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.1e-23 113.6 208 30.3
AL1G47450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.8e-23 113.2 208 30.3
AL9U10230 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.8e-23 113.2 208 29.8
AL3G38160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.7e-23 112.8 207 29.0
AL4G24140 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.7e-23 112.8 201 29.9
AL1G65160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 6.2e-23 112.1 208 29.8
AL6G42690 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 8.1e-23 111.7 208 29.8
AL5G12240 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.1e-22 111.3 208 29.8
AL4G14310 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.1e-22 109.8 207 29.0
AL8G11870 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.1e-22 109.8 207 28.5
BcaC03g16745 Brassica carinata HOM05D006121 ORTHO05D009559 4.0e-22 109.4 76 68.4
AL1G57330 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 5.3e-22 109.0 207 28.5
AL2G18400 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.2e-21 107.8 207 28.0
BcaC04g23066 Brassica carinata HOM05D006121 ORTHO05D009559 2.0e-21 107.1 147 37.4
AL6G47370 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 4.5e-21 105.9 207 27.5
Carub.0007s3731 Capsella rubella HOM05D009492 ORTHO05D011693 4.5e-21 105.9 242 27.3
AL8G33480 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.0e-20 104.8 172 30.2
AL5G23160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.7e-20 104.0 172 33.1
AL3G37710 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.9e-20 103.2 172 33.1
BcaC03g16668 Brassica carinata HOM05D006121 ORTHO05D009559 2.9e-20 103.2 98 57.1
Carub.0007s3611 Capsella rubella HOM05D009492 ORTHO05D011693 3.8e-20 102.8 207 29.0
AT1G51172 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 4.9e-20 102.4 122 39.3
Carub.0006s2644 Capsella rubella HOM05D009492 ORTHO05D011693 1.1e-19 101.3 189 30.7
AL2G23320 Arabidopsis lyrata HOM05D009492 ORTHO05D011693 1.4e-19 100.9 191 30.9
AL1G50390 Arabidopsis lyrata HOM05D009492 ORTHO05D011693 5.5e-19 99.0 190 31.1
AT4G03830 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 7.1e-19 98.6 125 35.2
Carub.0005s0956 Capsella rubella HOM05D009492 ORTHO05D011693 1.6e-18 97.4 244 28.3
AL6G45550 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.5e-18 96.3 186 31.2
AT5G32590 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 3.5e-18 96.3 207 28.5
Carub.0008s0728 Capsella rubella HOM05D009492 ORTHO05D011693 3.5e-18 96.3 211 28.0
Carub.0002s0942 Capsella rubella HOM05D009492 ORTHO05D011693 1.0e-17 94.7 175 30.9
Carub.0002s0975 Capsella rubella HOM05D009492 ORTHO05D011693 1.1e-16 91.3 150 34.0
Carub.0002s0916 Capsella rubella HOM05D009492 ORTHO05D011693 3.3e-16 89.7 166 30.1
AL4G17450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.3e-15 87.8 205 28.8
Carub.0002s1048 Capsella rubella HOM05D009492 ORTHO05D011693 2.1e-15 87.0 242 25.6
Carub.0004s0672 Capsella rubella HOM05D009492 ORTHO05D011693 2.8e-15 86.7 242 26.0
CARHR115630 Cardamine hirsuta HOM05D008458 ORTHO05D010628 2.8e-15 86.7 211 27.5
BcaC01g01842 Brassica carinata HOM05D006121 ORTHO05D009559 3.7e-15 86.3 62 67.7
BcaC01g00391 Brassica carinata HOM05D006121 ORTHO05D009559 4.8e-15 85.9 62 66.1
Carub.0003s2742 Capsella rubella HOM05D009492 ORTHO05D011693 6.3e-15 85.5 156 30.1
BcaC09g51377 Brassica carinata HOM05D006121 ORTHO05D009559 3.1e-14 83.2 98 43.9
BcaC07g37083 Brassica carinata HOM05D006121 ORTHO05D009559 5.3e-14 82.4 62 66.1
Carub.0001s3424 Capsella rubella HOM05D009492 ORTHO05D011693 3.4e-13 79.7 251 24.3
Carub.0007s3212 Capsella rubella HOM05D009492 ORTHO05D011693 7.6e-13 78.6 198 25.8
BolC2t09439H Brassica oleracea HOM05D003421 ORTHO05D003268 1.3e-12 77.8 188 26.6
BolC1t03978H Brassica oleracea HOM05D003421 ORTHO05D003268 2.9e-12 76.6 206 24.3
BcaC03g16667 Brassica carinata HOM05D006121 ORTHO05D009559 3.8e-12 76.3 63 60.3
BolC9t58013H Brassica oleracea HOM05D006121 ORTHO05D009559 3.8e-12 76.3 203 27.6
BraA05t20949Z Brassica rapa HOM05D006121 ORTHO05D009559 3.8e-12 76.3 88 45.5
BolC8t48817H Brassica oleracea HOM05D006121 ORTHO05D009559 1.9e-11 73.9 62 61.3
BolC4t24012H Brassica oleracea HOM05D006121 ORTHO05D009559 2.5e-11 73.6 71 46.5
BolC7t41205H Brassica oleracea HOM05D006121 ORTHO05D013509 2.5e-11 73.6 87 51.7
BcaB04g17962 Brassica carinata HOM05D006121 ORTHO05D009559 4.2e-11 72.8 91 38.5
AL3G43600 Arabidopsis lyrata HOM05D010629 ORTHO05D005680 7.2e-11 72.0 156 25.0
AT1G46696 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 2.7e-10 70.1 181 26.0
BcaC08g42837 Brassica carinata HOM05D006121 ORTHO05D009559 6.1e-10 68.9 54 63.0
Carub.0004s1788 Capsella rubella HOM05D009492 ORTHO05D011693 6.1e-10 68.9 243 23.0
AT1G20400 Arabidopsis thaliana HOM05D011598 ORTHO05D013181 1.3e-09 67.8 193 24.9
BcaC04g20964 Brassica carinata HOM05D003421 ORTHO05D003268 1.3e-09 67.8 213 24.9
Sp4g04860 Schrenkiella parvula HOM05D010772 ORTHO05D005680 2.3e-09 67.0 162 28.4
CARHR035710 Cardamine hirsuta HOM05D008458 ORTHO05D010628 3.9e-09 66.2 157 28.7
Carub.0008s0719 Capsella rubella HOM05D009492 ORTHO05D011693 2.5e-08 63.5 131 27.5
Carub.0014s0006 Capsella rubella HOM05D009492 ORTHO05D011693 3.3e-08 63.2 158 24.7
Carub.0006s2663 Capsella rubella HOM05D009492 ORTHO05D011693 4.3e-08 62.8 111 29.7
BolC3t19110H Brassica oleracea HOM05D006121 ORTHO05D043263 5.7e-08 62.4 48 64.6
BolC8t48271H Brassica oleracea HOM05D003421 ORTHO05D003268 5.7e-08 62.4 206 26.7
AT2G15420 Arabidopsis thaliana HOM05D010629 ORTHO05D005680 7.4e-08 62.0 159 22.6
Carub.0001s3399 Capsella rubella HOM05D008386 ORTHO05D010572 1.3e-07 61.2 133 29.3
Sp7g11540 Schrenkiella parvula HOM05D010529 ORTHO05D012528 1.3e-07 61.2 166 27.7
Carub.0072s0001 Capsella rubella HOM05D010629 ORTHO05D005680 2.8e-07 60.1 142 23.2
CARHR174650 Cardamine hirsuta HOM05D008458 ORTHO05D010628 2.8e-07 60.1 145 24.1
BolC3t19281H Brassica oleracea HOM05D003421 ORTHO05D003268 3.7e-07 59.7 224 20.1
Sp4g07450 Schrenkiella parvula HOM05D010529 ORTHO05D012528 3.7e-07 59.7 180 28.3
BolC9t56748H Brassica oleracea HOM05D003421 ORTHO05D003268 6.3e-07 58.9 195 26.2
Carub.0003s2830 Capsella rubella HOM05D009492 ORTHO05D011693 6.3e-07 58.9 159 23.9
BolC4t23765H Brassica oleracea HOM05D003421 ORTHO05D003268 1.1e-06 58.2 116 28.4
BcaC07g37447 Brassica carinata HOM05D006121 ORTHO05D009559 1.8e-06 57.4 62 50.0
A08p08190 Brassica napus HOM05D008596 ORTHO05D003268 1.8e-06 57.4 169 25.4
Sp6g11050 Schrenkiella parvula HOM05D010529 ORTHO05D012528 2.4e-06 57.0 142 31.7
CARHR118560 Cardamine hirsuta HOM05D008458 ORTHO05D010628 5.3e-06 55.8 109 33.9
A03p66670 Brassica napus HOM05D008596 ORTHO05D003268 9.0e-06 55.1 153 25.5
CARHR053560 Cardamine hirsuta HOM05D008458 ORTHO05D010628 9.0e-06 55.1 100 31.0


User provided reference genes

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