Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g02131 Brassica carinata HOM05D006121 ORTHO05D013509 3.6e-121 438.3 237 100.0
BcaC04g23560 Brassica carinata HOM05D006121 ORTHO05D013509 1.0e-102 377.1 237 89.0
BcaC04g20824 Brassica carinata HOM05D006121 ORTHO05D013509 2.7e-100 369.0 236 86.4
BcaC06g35840 Brassica carinata HOM05D006121 ORTHO05D013509 1.3e-89 333.6 237 78.1
BcaC02g10895 Brassica carinata HOM05D006121 ORTHO05D013509 3.7e-89 332.0 214 87.4
BcaC09g49299 Brassica carinata HOM05D006121 ORTHO05D009559 4.2e-77 292.0 195 83.1
BcaC02g11960 Brassica carinata HOM05D006121 ORTHO05D009559 5.5e-77 291.6 225 74.7
BcaC01g06835 Brassica carinata HOM05D006121 ORTHO05D009559 1.0e-75 287.3 214 77.1
BcaC03g18509 Brassica carinata HOM05D006121 ORTHO05D013509 3.7e-73 278.9 214 73.4
BcaC08g43580 Brassica carinata HOM05D006121 ORTHO05D009559 4.1e-64 248.8 211 69.2
BcaC02g11248 Brassica carinata HOM05D006121 ORTHO05D009559 6.1e-60 235.0 227 63.9
BcaC01g01789 Brassica carinata HOM05D006121 ORTHO05D013509 3.3e-53 212.6 135 87.4
BcaC06g36167 Brassica carinata HOM05D006121 ORTHO05D009559 2.0e-50 203.4 249 55.4
BcaC07g37146 Brassica carinata HOM05D006121 ORTHO05D013509 1.9e-45 186.8 115 90.4
BolC7t41205H Brassica oleracea HOM05D006121 ORTHO05D013509 9.5e-45 184.5 256 50.4
BolC3t20163H Brassica oleracea HOM05D006121 ORTHO05D009559 5.8e-34 148.7 119 70.6
BcaC01g01790 Brassica carinata HOM05D006121 ORTHO05D009559 5.1e-30 135.6 84 88.1
BcaC04g20381 Brassica carinata HOM05D006121 ORTHO05D009559 6.6e-30 135.2 88 83.0
BraA05t21496Z Brassica rapa HOM05D000633 ORTHO05D000477 1.1e-29 134.4 178 46.6
BcaC08g43698 Brassica carinata HOM05D006121 ORTHO05D013509 1.9e-29 133.7 86 86.0
BolC8t48817H Brassica oleracea HOM05D006121 ORTHO05D009559 4.3e-29 132.5 126 61.9
BcaC01g01841 Brassica carinata HOM05D006121 ORTHO05D013509 7.3e-29 131.7 89 83.1
BcaC04g20624 Brassica carinata HOM05D006121 ORTHO05D009559 1.4e-27 127.5 96 71.9
BcaC01g00175 Brassica carinata HOM05D006121 ORTHO05D013509 5.4e-24 115.5 89 77.5
BcaC08g43421 Brassica carinata HOM05D006121 ORTHO05D009559 5.4e-24 115.5 83 75.9
BcaC03g16666 Brassica carinata HOM05D006121 ORTHO05D013509 7.1e-24 115.2 82 78.0
BcaC05g27676 Brassica carinata HOM05D006121 ORTHO05D009559 3.9e-22 109.4 75 78.7
BcaC07g38330 Brassica carinata HOM05D006121 ORTHO05D009559 9.6e-21 104.8 71 81.7
BcaC03g16202 Brassica carinata HOM05D006121 ORTHO05D013509 8.1e-20 101.7 65 86.2
BcaC02g10683 Brassica carinata HOM05D008386 ORTHO05D010572 2.0e-18 97.1 246 32.9
BcaC08g42836 Brassica carinata HOM05D006121 ORTHO05D009559 2.6e-18 96.7 68 75.0
BcaC01g02164 Brassica carinata HOM05D008386 ORTHO05D010572 7.6e-18 95.1 204 33.3
BcaC07g39839 Brassica carinata HOM05D006121 ORTHO05D013509 1.3e-17 94.4 68 73.5
BcaC01g02130 Brassica carinata HOM05D008386 ORTHO05D010572 2.9e-17 93.2 241 32.8
BcaC08g42828 Brassica carinata HOM05D008386 ORTHO05D010572 3.8e-17 92.8 239 33.9
BcaC04g21234 Brassica carinata HOM05D008386 ORTHO05D010572 1.1e-16 91.3 247 32.0
BcaC09g49551 Brassica carinata HOM05D008386 ORTHO05D010572 7.1e-16 88.6 239 33.5
BcaC05g27433 Brassica carinata HOM05D006121 ORTHO05D009559 9.3e-16 88.2 223 33.6
BcaC04g20036 Brassica carinata HOM05D006121 ORTHO05D009559 1.7e-14 84.0 111 46.8
BcaC02g10386 Brassica carinata HOM05D008386 ORTHO05D010572 3.0e-14 83.2 237 31.6
BcaC04g20778 Brassica carinata HOM05D008386 ORTHO05D010572 3.0e-14 83.2 242 30.2
BcaC03g16156 Brassica carinata HOM05D006121 ORTHO05D009559 5.1e-14 82.4 57 77.2
BcaC09g49792 Brassica carinata HOM05D006121 ORTHO05D009559 1.5e-13 80.9 107 45.8
Carub.0001s3399 Capsella rubella HOM05D008386 ORTHO05D010572 4.3e-13 79.3 224 27.2
BcaC06g36507 Brassica carinata HOM05D006121 ORTHO05D009559 5.6e-13 79.0 223 33.6
BcaC03g17371 Brassica carinata HOM05D006121 ORTHO05D009559 9.6e-13 78.2 227 31.3
BcaC04g19410 Brassica carinata HOM05D006121 ORTHO05D009559 9.6e-13 78.2 49 83.7
BcaC06g35988 Brassica carinata HOM05D006121 ORTHO05D009559 2.8e-12 76.6 223 32.3
BolC8t48816H Brassica oleracea HOM05D008386 ORTHO05D010572 2.8e-12 76.6 205 30.7
BcaC04g21297 Brassica carinata HOM05D006121 ORTHO05D095629 4.0e-11 72.8 49 75.5
BcaC01g02238 Brassica carinata HOM05D006121 ORTHO05D009559 9.0e-11 71.6 224 30.8
C05p29190 Brassica napus HOM05D006121 ORTHO05D009559 9.0e-11 71.6 115 39.1
BcaC02g11959 Brassica carinata HOM05D008386 ORTHO05D010572 1.2e-10 71.2 88 44.3
BcaC03g16371 Brassica carinata HOM05D006121 ORTHO05D009559 1.5e-10 70.9 162 33.3
BcaC04g23066 Brassica carinata HOM05D006121 ORTHO05D009559 3.4e-10 69.7 233 30.9
BcaC02g10719 Brassica carinata HOM05D008386 ORTHO05D010572 4.4e-10 69.3 98 40.8
BcaC04g23210 Brassica carinata HOM05D006121 ORTHO05D009559 4.4e-10 69.3 208 31.7
BcaC09g49541 Brassica carinata HOM05D006121 ORTHO05D009559 4.4e-10 69.3 206 33.0
BcaC02g10590 Brassica carinata HOM05D008386 ORTHO05D010572 9.9e-10 68.2 98 41.8
BolC9t57206H Brassica oleracea HOM05D008386 ORTHO05D010572 2.9e-09 66.6 139 33.8
BcaC02g10596 Brassica carinata HOM05D008386 ORTHO05D010572 6.4e-09 65.5 84 45.2
BcaC06g36095 Brassica carinata HOM05D006121 ORTHO05D009559 6.4e-09 65.5 47 74.5
BolC6t36221H Brassica oleracea HOM05D000313 ORTHO05D000065 6.4e-09 65.5 65 55.4
BolSC21t60224H Brassica oleracea HOM05D006121 ORTHO05D009559 1.1e-08 64.7 119 42.9
BraA06t25240Z Brassica rapa HOM05D006121 ORTHO05D013509 1.4e-08 64.3 79 53.2
BcaC05g27677 Brassica carinata HOM05D008386 ORTHO05D010572 2.4e-08 63.5 83 43.4
BraA09t38607Z Brassica rapa HOM05D006121 ORTHO05D009559 2.4e-08 63.5 229 27.9
BolC3t19363H Brassica oleracea HOM05D008386 ORTHO05D010572 1.6e-07 60.8 81 40.7
Carub.0003s2904 Capsella rubella HOM05D006121 ORTHO05D009559 2.1e-07 60.5 207 24.2
CARHR119460 Cardamine hirsuta HOM05D008386 ORTHO05D010572 2.7e-07 60.1 212 26.4
BolC5t31651H Brassica oleracea HOM05D006121 ORTHO05D009559 1.0e-06 58.2 67 44.8
BraA05t21497Z Brassica rapa HOM05D008386 ORTHO05D010572 1.0e-06 58.2 85 41.2


User provided reference genes

Program Settings