Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g02043 Brassica carinata HOM05D003835 ORTHO05D004930 8.5e-179 630.2 309 100.0
BcaC02g10813 Brassica carinata HOM05D003835 ORTHO05D004930 3.9e-123 445.3 339 70.2
BcaC04g20991 Brassica carinata HOM05D003835 ORTHO05D004930 9.6e-106 387.5 337 62.3
BcaNung05987 Brassica carinata HOM05D003835 ORTHO05D004930 5.8e-103 378.3 307 66.1
BcaC06g36790 Brassica carinata HOM05D003835 ORTHO05D004930 3.8e-102 375.6 304 67.1
BcaC04g20891 Brassica carinata HOM05D003835 ORTHO05D004930 3.0e-99 365.9 324 61.7
BcaC04g20623 Brassica carinata HOM05D003835 ORTHO05D004930 1.9e-98 363.2 328 60.4
BolC8t47793H Brassica oleracea HOM05D003835 ORTHO05D004930 2.5e-98 362.8 307 63.2
BcaC05g27575 Brassica carinata HOM05D003835 ORTHO05D004930 9.6e-98 360.9 253 73.1
BcaC02g10732 Brassica carinata HOM05D003835 ORTHO05D004930 2.1e-97 359.8 255 72.2
BcaC04g20857 Brassica carinata HOM05D003835 ORTHO05D004930 1.1e-93 347.4 337 58.8
BcaC04g20985 Brassica carinata HOM05D003835 ORTHO05D004930 3.2e-93 345.9 315 60.6
BcaC04g20843 Brassica carinata HOM05D003835 ORTHO05D004930 5.7e-90 335.1 338 58.0
BcaC05g27887 Brassica carinata HOM05D003835 ORTHO05D004930 1.1e-88 330.9 255 66.7
BcaC01g02168 Brassica carinata HOM05D003835 ORTHO05D004930 9.0e-88 327.8 254 70.9
BcaC06g36022 Brassica carinata HOM05D003835 ORTHO05D004930 5.0e-78 295.4 256 61.7
BcaC03g16445 Brassica carinata HOM05D003835 ORTHO05D004930 9.4e-77 291.2 255 65.5
BcaB01g01376 Brassica carinata HOM05D003835 ORTHO05D004930 1.4e-72 277.3 347 46.7
BcaC09g49698 Brassica carinata HOM05D003835 ORTHO05D004930 7.7e-71 271.6 248 55.6
BolC8t47946H Brassica oleracea HOM05D003835 ORTHO05D004930 2.5e-69 266.5 208 68.3
BcaB01g01339 Brassica carinata HOM05D003835 ORTHO05D004930 1.2e-68 264.2 350 45.4
BcaC01g01952 Brassica carinata HOM05D003835 ORTHO05D004930 2.7e-68 263.1 252 56.3
BcaC02g10560 Brassica carinata HOM05D003835 ORTHO05D004930 1.8e-67 260.4 342 45.0
BolC4t24052H Brassica oleracea HOM05D003835 ORTHO05D004930 6.7e-67 258.5 187 71.1
BcaC09g49645 Brassica carinata HOM05D003835 ORTHO05D004930 9.7e-66 254.6 202 65.3
BcaC05g27589 Brassica carinata HOM05D003835 ORTHO05D004930 1.2e-63 247.7 338 45.6
BcaC07g37247 Brassica carinata HOM05D003835 ORTHO05D004930 1.7e-62 243.8 202 61.9
BcaB07g33106 Brassica carinata HOM05D003835 ORTHO05D004930 3.8e-62 242.7 203 60.6
BcaB06g26909 Brassica carinata HOM05D003835 ORTHO05D004930 2.5e-61 240.0 341 42.8
BcaC01g02153 Brassica carinata HOM05D003835 ORTHO05D004930 9.4e-61 238.0 323 45.8
BcaC04g20851 Brassica carinata HOM05D003835 ORTHO05D004930 2.7e-60 236.5 202 61.4
BcaC03g16671 Brassica carinata HOM05D003835 ORTHO05D004930 3.6e-60 236.1 214 57.0
BcaC05g27891 Brassica carinata HOM05D003835 ORTHO05D004930 2.3e-59 233.4 167 71.3
BcaC05g28695 Brassica carinata HOM05D003835 ORTHO05D004930 6.8e-59 231.9 332 44.6
BcaC07g37476 Brassica carinata HOM05D003835 ORTHO05D004930 2.8e-57 226.5 129 79.8
BcaC03g17353 Brassica carinata HOM05D003835 ORTHO05D004930 4.8e-57 225.7 340 42.4
BraA01t02821Z Brassica rapa HOM05D003835 ORTHO05D004930 8.3e-57 224.9 311 44.7
BcaC02g10604 Brassica carinata HOM05D003835 ORTHO05D004930 1.0e-54 218.0 202 58.9
BcaC05g27703 Brassica carinata HOM05D003835 ORTHO05D004930 8.5e-54 214.9 187 58.3
BcaC09g49552 Brassica carinata HOM05D003835 ORTHO05D004930 7.2e-53 211.8 116 82.8
BcaC06g36461 Brassica carinata HOM05D003835 ORTHO05D004930 2.2e-49 200.3 318 40.6
BcaC06g35964 Brassica carinata HOM05D003835 ORTHO05D004930 2.0e-47 193.7 339 40.1
BcaC03g16677 Brassica carinata HOM05D003835 ORTHO05D004930 1.5e-45 187.6 105 83.8
BcaC03g16196 Brassica carinata HOM05D003835 ORTHO05D004930 1.5e-42 177.6 152 57.9
BcaC04g20889 Brassica carinata HOM05D003835 ORTHO05D004930 1.5e-42 177.6 98 81.6
BcaC08g43746 Brassica carinata HOM05D003835 ORTHO05D004930 1.5e-42 177.6 98 84.7
BcaC01g02336 Brassica carinata HOM05D003835 ORTHO05D004930 3.4e-42 176.4 147 62.6
BcaC09g49753 Brassica carinata HOM05D003835 ORTHO05D004930 3.4e-42 176.4 98 86.7
BolC8t47786H Brassica oleracea HOM05D003835 ORTHO05D014092 1.1e-37 161.4 116 74.1
BolC8t50199H Brassica oleracea HOM05D003835 ORTHO05D004930 5.6e-37 159.1 154 55.2
BcaB05g23138 Brassica carinata HOM05D003835 ORTHO05D004930 9.5e-37 158.3 175 48.6
BcaB01g01100 Brassica carinata HOM05D003835 ORTHO05D004930 1.6e-36 157.5 165 49.1
BcaC04g20888 Brassica carinata HOM05D003835 ORTHO05D004930 1.6e-36 157.5 94 83.0
BcaC06g35829 Brassica carinata HOM05D003835 ORTHO05D004930 6.8e-35 152.1 160 51.9
BraA05t21182Z Brassica rapa HOM05D003835 ORTHO05D004930 8.9e-35 151.8 303 36.0
BcaC07g39533 Brassica carinata HOM05D003835 ORTHO05D004930 2.0e-34 150.6 151 54.3
BcaC01g02120 Brassica carinata HOM05D003835 ORTHO05D004930 4.4e-34 149.4 111 71.2
BcaB01g01286 Brassica carinata HOM05D003835 ORTHO05D004930 4.9e-33 146.0 153 52.3
BcaC09g49664 Brassica carinata HOM05D003835 ORTHO05D004930 8.3e-33 145.2 77 87.0
BraA08t32792Z Brassica rapa HOM05D003835 ORTHO05D004930 2.4e-32 143.7 296 37.2
BcaC04g20805 Brassica carinata HOM05D003835 ORTHO05D004930 3.2e-32 143.3 95 71.6
BcaC03g16533 Brassica carinata HOM05D003835 ORTHO05D004930 3.0e-30 136.7 137 56.2
BolC8t47785H Brassica oleracea HOM05D003835 ORTHO05D004930 3.9e-30 136.3 119 60.5
BcaC04g20842 Brassica carinata HOM05D003835 ORTHO05D004930 8.6e-30 135.2 177 44.6
BcaC07g37471 Brassica carinata HOM05D003835 ORTHO05D004930 4.3e-29 132.9 119 58.8
BcaB05g23456 Brassica carinata HOM05D003835 ORTHO05D004930 5.2e-27 125.9 140 51.4
BcaB05g23025 Brassica carinata HOM05D003835 ORTHO05D004930 7.5e-26 122.1 137 47.4
BcaC09g48282 Brassica carinata HOM05D003835 ORTHO05D004930 9.8e-26 121.7 76 65.8
BraA05t21049Z Brassica rapa HOM05D003835 ORTHO05D014092 2.2e-25 120.6 74 82.4
BraA03t15672Z Brassica rapa HOM05D003835 ORTHO05D004930 2.1e-23 114.0 217 38.2
BcaC06g35990 Brassica carinata HOM05D003835 ORTHO05D004930 4.6e-23 112.8 67 82.1
BcaC06g36783 Brassica carinata HOM05D003835 ORTHO05D004930 6.0e-23 112.5 108 57.4
BcaC07g37472 Brassica carinata HOM05D003835 ORTHO05D014092 6.0e-23 112.5 74 78.4
BcaC03g16471 Brassica carinata HOM05D003835 ORTHO05D004930 1.0e-22 111.7 108 55.6
BcaB06g26790 Brassica carinata HOM05D003835 ORTHO05D004930 3.9e-22 109.8 137 38.7
BolC6t36351H Brassica oleracea HOM05D003835 ORTHO05D014092 3.9e-22 109.8 194 41.8
BolC3t19175H Brassica oleracea HOM05D003835 ORTHO05D004930 1.9e-21 107.5 177 33.9
BcaC09g49670 Brassica carinata HOM05D003835 ORTHO05D004930 2.5e-21 107.1 76 68.4
BcaC01g02227 Brassica carinata HOM05D003835 ORTHO05D004930 7.3e-21 105.5 101 55.4
BolC2t10319H Brassica oleracea HOM05D003835 ORTHO05D004930 7.3e-21 105.5 99 58.6
BolC4t24276H Brassica oleracea HOM05D003835 ORTHO05D004930 7.3e-21 105.5 260 34.2
BcaC03g16557 Brassica carinata HOM05D007458 ORTHO05D009533 3.6e-20 103.2 158 36.1
BcaC07g37517 Brassica carinata HOM05D003835 ORTHO05D004930 3.6e-20 103.2 116 47.4
BcaC07g37248 Brassica carinata HOM05D003835 ORTHO05D004930 8.1e-20 102.1 60 76.7
BcaB08g35159 Brassica carinata HOM05D003835 ORTHO05D004930 1.1e-19 101.7 112 41.1
BcaC06g36120 Brassica carinata HOM05D003835 ORTHO05D004930 1.4e-19 101.3 52 90.4
AL4G20670 Arabidopsis lyrata HOM05D003835 ORTHO05D004930 4.0e-19 99.8 184 32.6
BcaC02g10775 Brassica carinata HOM05D003835 ORTHO05D004930 5.2e-19 99.4 76 64.5
BcaC03g16198 Brassica carinata HOM05D003835 ORTHO05D004930 5.2e-19 99.4 131 39.7
Carub.0008s0643 Capsella rubella HOM05D003835 ORTHO05D004930 6.8e-19 99.0 186 31.2
BolC3t19072H Brassica oleracea HOM05D003835 ORTHO05D004930 8.9e-19 98.6 52 90.4
BcaC02g10387 Brassica carinata HOM05D003835 ORTHO05D004930 3.4e-18 96.7 265 31.7
BcaC09g49627 Brassica carinata HOM05D003835 ORTHO05D004930 4.4e-18 96.3 53 84.9
BcaC05g27890 Brassica carinata HOM05D003835 ORTHO05D004930 1.7e-17 94.4 52 86.5
BcaC05g27888 Brassica carinata HOM05D003835 ORTHO05D004930 2.2e-17 94.0 84 58.3
BcaC01g02195 Brassica carinata HOM05D003835 ORTHO05D004930 2.9e-17 93.6 51 86.3
BcaC03g16229 Brassica carinata HOM05D003835 ORTHO05D014092 3.8e-17 93.2 52 88.5
BcaC03g16751 Brassica carinata HOM05D003835 ORTHO05D004930 4.9e-17 92.8 181 33.7
BcaC07g37567 Brassica carinata HOM05D003835 ORTHO05D014092 4.9e-17 92.8 61 75.4
BolC2t11376H Brassica oleracea HOM05D003835 ORTHO05D004930 1.4e-16 91.3 158 34.2
BcaC06g35918 Brassica carinata HOM05D003835 ORTHO05D004930 2.4e-16 90.5 311 30.9
BcaC06g35991 Brassica carinata HOM05D003835 ORTHO05D014092 3.2e-16 90.1 72 69.4
BcaC02g10605 Brassica carinata HOM05D003835 ORTHO05D004930 4.1e-16 89.7 94 54.3
BcaC05g28049 Brassica carinata HOM05D003835 ORTHO05D004930 1.2e-15 88.2 189 30.7
C05p36390 Brassica napus HOM05D003835 ORTHO05D014092 1.0e-14 85.1 96 51.0
BcaB02g11345 Brassica carinata HOM05D003835 ORTHO05D004930 1.7e-14 84.3 86 41.9
BraA05t21178Z Brassica rapa HOM05D003835 ORTHO05D004930 2.3e-14 84.0 235 29.8
BcaC05g28698 Brassica carinata HOM05D003835 ORTHO05D004930 6.6e-14 82.4 52 76.9
BcaC09g48541 Brassica carinata HOM05D003835 ORTHO05D004930 1.5e-13 81.3 142 36.6
BraA09t39004Z Brassica rapa HOM05D003835 ORTHO05D014092 2.5e-13 80.5 50 80.0
BcaC05g28699 Brassica carinata HOM05D007458 ORTHO05D009533 4.3e-13 79.7 128 37.5
BcaC01g02337 Brassica carinata HOM05D003835 ORTHO05D014092 1.2e-12 78.2 73 56.2
BcaC04g20890 Brassica carinata HOM05D003835 ORTHO05D014092 3.6e-12 76.6 66 60.6
BcaC07g37593 Brassica carinata HOM05D003835 ORTHO05D004930 3.6e-12 76.6 40 87.5
BcaC06g35162 Brassica carinata HOM05D003835 ORTHO05D004930 6.2e-12 75.9 78 47.4
BolC6t37236H Brassica oleracea HOM05D003835 ORTHO05D004930 8.1e-12 75.5 45 80.0
BcaC04g20902 Brassica carinata HOM05D003835 ORTHO05D004930 1.8e-11 74.3 48 75.0
BcaC03g16787 Brassica carinata HOM05D003835 ORTHO05D004930 2.4e-11 73.9 52 67.3
BcaC08g44357 Brassica carinata HOM05D003835 ORTHO05D004930 2.4e-11 73.9 81 43.2
BcaC09g50045 Brassica carinata HOM05D003835 ORTHO05D004930 2.4e-11 73.9 156 32.7
BcaB08g35438 Brassica carinata HOM05D003835 ORTHO05D004930 4.0e-11 73.2 98 35.7
BcaC03g16228 Brassica carinata HOM05D003835 ORTHO05D004930 6.9e-11 72.4 79 44.3
BcaC03g16676 Brassica carinata HOM05D003835 ORTHO05D004930 8.9e-11 72.0 53 66.0
CARHR257890 Cardamine hirsuta HOM05D003835 ORTHO05D004930 1.2e-10 71.6 105 35.2
BcaC06g35919 Brassica carinata HOM05D003835 ORTHO05D004930 1.5e-10 71.2 181 28.2
BcaC01g02117 Brassica carinata HOM05D003835 ORTHO05D004930 2.0e-10 70.9 53 64.2
BcaC03g14834 Brassica carinata HOM05D003835 ORTHO05D004930 4.4e-10 69.7 81 42.0
Thhalv10002744m.g Eutrema salsugineum HOM05D003835 ORTHO05D004930 4.4e-10 69.7 75 44.0
BraA09t38710Z Brassica rapa HOM05D003835 ORTHO05D019916 9.9e-10 68.6 141 31.9
BcaC07g37516 Brassica carinata HOM05D003835 ORTHO05D004930 1.3e-09 68.2 49 73.5
A04p11820 Brassica napus HOM05D003835 ORTHO05D004930 1.7e-09 67.8 137 30.7
CANSAT35G0823 Cannabis sativa HOM05D014149 ORTHO05D004930 1.7e-09 67.8 83 41.0
BcaB03g16388 Brassica carinata HOM05D003835 ORTHO05D004930 2.2e-09 67.4 83 45.8
CANSAT01G2276 Cannabis sativa HOM05D014149 ORTHO05D011451 6.4e-09 65.9 83 39.8
BcaB02g11288 Brassica carinata HOM05D003835 ORTHO05D004930 3.2e-08 63.5 90 44.4
BcaB08g35260 Brassica carinata HOM05D003835 ORTHO05D004930 3.2e-08 63.5 50 60.0
BcaC03g16553 Brassica carinata HOM05D003835 ORTHO05D004930 3.2e-08 63.5 53 60.4
BcaB04g18230 Brassica carinata HOM05D003835 ORTHO05D004930 7.1e-08 62.4 75 40.0
BcaC03g16405 Brassica carinata HOM05D003835 ORTHO05D004930 1.2e-07 61.6 52 57.7
Oeu023903.1 Olea europaea HOM05D011150 ORTHO05D011451 1.2e-07 61.6 178 29.8
QL03p072853 Quercus lobata HOM05D009413 ORTHO05D000116 1.2e-07 61.6 182 25.8
QL03p072862 Quercus lobata HOM05D009413 ORTHO05D000116 1.2e-07 61.6 182 25.8
QL04p089085 Quercus lobata HOM05D009413 ORTHO05D000116 1.2e-07 61.6 182 25.8
BolC5t32809H Brassica oleracea HOM05D007458 ORTHO05D009533 1.6e-07 61.2 74 43.2
BolC7t40712H Brassica oleracea HOM05D003835 ORTHO05D004930 2.1e-07 60.8 64 51.6
CANSAT35G1012 Cannabis sativa HOM05D027150 ORTHO05D028423 2.7e-07 60.5 84 38.1
BcaC03g16231 Brassica carinata HOM05D003835 ORTHO05D014092 7.8e-07 58.9 52 61.5
SalBow5G1224 Salvia bowleyana HOM05D010617 ORTHO05D011805 1.0e-06 58.5 68 39.7
SalBow5G2537 Salvia bowleyana HOM05D010617 ORTHO05D011805 1.0e-06 58.5 68 39.7
BcaB03g16212 Brassica carinata HOM05D003835 ORTHO05D004930 1.7e-06 57.8 80 38.8
QL05p031643 Quercus lobata HOM05D009413 ORTHO05D000116 1.7e-06 57.8 134 26.1
QL10p041460 Quercus lobata HOM05D009413 ORTHO05D000116 1.7e-06 57.8 134 26.1
QL11p005301 Quercus lobata HOM05D009413 ORTHO05D000116 1.7e-06 57.8 134 26.1
BcaC05g27823 Brassica carinata HOM05D003835 ORTHO05D004930 2.3e-06 57.4 31 80.6
BraA09t39005Z Brassica rapa HOM05D003835 ORTHO05D004930 2.3e-06 57.4 45 62.2
CANSAT25G0896 Cannabis sativa HOM05D012521 ORTHO05D011451 2.3e-06 57.4 141 27.7
CANSAT64G0037 Cannabis sativa HOM05D014149 ORTHO05D011451 3.0e-06 57.0 66 42.4
BcaC04g20887 Brassica carinata HOM05D003835 ORTHO05D004930 3.9e-06 56.6 50 58.0
CANSAT54G2560 Cannabis sativa HOM05D012521 ORTHO05D011451 3.9e-06 56.6 141 27.7
TWI36G1199 Tripterygium wilfordii HOM05D012521 ORTHO05D000116 3.9e-06 56.6 108 28.7
TWI59G0099 Tripterygium wilfordii HOM05D011150 ORTHO05D011451 5.1e-06 56.2 108 28.7
BcaC03g16230 Brassica carinata HOM05D003835 ORTHO05D004930 8.7e-06 55.5 29 86.2


User provided reference genes

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