Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g02011 Brassica carinata HOM05D008324 ORTHO05D010603 1.4e-40 169.1 79 100.0
A06p21710 Brassica napus HOM05D008324 ORTHO05D010603 3.1e-40 167.9 79 98.7
BraA06t25262Z Brassica rapa HOM05D008324 ORTHO05D010603 3.1e-40 167.9 79 98.7
C03p69550 Brassica napus HOM05D008324 ORTHO05D010603 6.8e-40 166.8 77 100.0
BolC3t19210H Brassica oleracea HOM05D008324 ORTHO05D010603 6.8e-40 166.8 77 100.0
BcaB01g01143 Brassica carinata HOM05D008324 ORTHO05D010603 9.5e-34 146.4 80 87.5
Thhalv10002746m.g Eutrema salsugineum HOM05D008324 ORTHO05D010603 2.4e-24 115.2 68 75.0
AT3G44718 Arabidopsis thaliana HOM05D008324 ORTHO05D010603 2.6e-23 111.7 68 69.1
AL5G22910 Arabidopsis lyrata HOM05D008324 ORTHO05D010603 5.8e-23 110.5 68 69.1
Sp5g16470 Schrenkiella parvula HOM05D008324 ORTHO05D010603 7.6e-23 110.2 69 68.1
Carub.0005s1039 Capsella rubella HOM05D008324 ORTHO05D010603 9.6e-18 93.2 65 64.6
AT2G20619 Arabidopsis thaliana HOM05D008324 ORTHO05D010603 4.2e-13 77.8 68 48.5
Carub.0003s3513 Capsella rubella HOM05D008324 ORTHO05D010603 1.6e-12 75.9 67 47.8
AT2G20605 Arabidopsis thaliana HOM05D008324 ORTHO05D010603 2.7e-12 75.1 67 47.8
AT2G20618 Arabidopsis thaliana HOM05D008324 ORTHO05D010603 7.9e-12 73.6 66 47.0
BcaC06g35572 Brassica carinata HOM05D008324 ORTHO05D010603 7.9e-12 73.6 62 53.2
C07p13390 Brassica napus HOM05D008324 ORTHO05D010603 7.9e-12 73.6 62 53.2
A07p08580 Brassica napus HOM05D008324 ORTHO05D010603 1.0e-11 73.2 62 53.2
BcaB02g10879 Brassica carinata HOM05D008324 ORTHO05D010603 1.3e-11 72.8 62 48.4
Sp3g33860 Schrenkiella parvula HOM05D008324 ORTHO05D010603 1.8e-11 72.4 62 50.0
BraA07t28647Z Brassica rapa HOM05D008324 ORTHO05D010603 3.0e-11 71.6 61 49.2
BcaC06g36752 Brassica carinata HOM05D008324 ORTHO05D010603 1.5e-10 69.3 61 47.5
C07p00360 Brassica napus HOM05D008324 ORTHO05D010603 1.5e-10 69.3 61 47.5
BolC7t40485H Brassica oleracea HOM05D008324 ORTHO05D010603 1.5e-10 69.3 61 47.5
BcaC07g41202 Brassica carinata HOM05D008324 ORTHO05D010603 2.5e-10 68.6 62 48.4
A07p00140 Brassica napus HOM05D008324 ORTHO05D010603 2.5e-10 68.6 61 47.5
BraA07t27808Z Brassica rapa HOM05D008324 ORTHO05D010603 2.5e-10 68.6 61 47.5
BcaB03g16856 Brassica carinata HOM05D008324 ORTHO05D010603 3.3e-10 68.2 61 45.9
Aa31LG10G4750 Aethionema arabicum HOM05D008324 ORTHO05D010603 7.4e-10 67.0 61 47.5
Carub.0003s3512 Capsella rubella HOM05D008324 ORTHO05D010603 7.4e-10 67.0 55 54.5
C07p00380 Brassica napus HOM05D008324 ORTHO05D010603 9.6e-10 66.6 66 42.4
BolC7t40487H Brassica oleracea HOM05D008324 ORTHO05D010603 9.6e-10 66.6 66 42.4
Aa31LG10G4730 Aethionema arabicum HOM05D008324 ORTHO05D010603 1.3e-09 66.2 61 49.2
A09p58790 Brassica napus HOM05D008324 ORTHO05D010603 1.3e-09 66.2 68 44.1
Carub.0003s3511 Capsella rubella HOM05D008324 ORTHO05D010603 1.3e-09 66.2 61 50.8
Thhalv10002242m.g Eutrema salsugineum HOM05D008324 ORTHO05D010603 1.3e-09 66.2 62 46.8
AT2G20595 Arabidopsis thaliana HOM05D008324 ORTHO05D010603 1.6e-09 65.9 67 44.8
Carub.0003s3509 Capsella rubella HOM05D008324 ORTHO05D010603 2.8e-09 65.1 54 53.7
Carub.0003s3510 Capsella rubella HOM05D008324 ORTHO05D010603 3.7e-09 64.7 52 55.8
CARHR111200 Cardamine hirsuta HOM05D008324 ORTHO05D010603 3.7e-09 64.7 61 47.5
BcaB08g34931 Brassica carinata HOM05D008324 ORTHO05D010603 8.1e-09 63.5 66 47.0
BraA09t41265Z Brassica rapa HOM05D008324 ORTHO05D010603 8.1e-09 63.5 62 45.2
Thhalv10012145m.g Eutrema salsugineum HOM05D008324 ORTHO05D010603 2.4e-08 62.0 61 47.5
BolC7t40483H Brassica oleracea HOM05D008324 ORTHO05D010603 4.5e-07 57.8 61 41.0
C07p00340 Brassica napus HOM05D008324 ORTHO05D010603 5.8e-07 57.4 54 48.1
BcaB08g34924 Brassica carinata HOM05D008324 ORTHO05D010603 7.6e-07 57.0 62 43.5
BcaB08g34925 Brassica carinata HOM05D008324 ORTHO05D010603 7.6e-07 57.0 62 43.5
Carub.0002s0841 Capsella rubella HOM05D008324 ORTHO05D010603 1.7e-06 55.8 54 50.0
BcaB08g34923 Brassica carinata HOM05D008324 ORTHO05D010603 3.8e-06 54.7 62 41.9
BolC8t51771H Brassica oleracea HOM05D008324 ORTHO05D010603 8.4e-06 53.5 62 41.9
CARHR111190 Cardamine hirsuta HOM05D008324 ORTHO05D010603 8.4e-06 53.5 36 55.6


User provided reference genes

Program Settings