Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g02007 Brassica carinata HOM05D007948 ORTHO05D006374 1.9e-58 229.2 131 100.0
BcaC02g08352 Brassica carinata HOM05D007948 ORTHO05D006374 8.7e-40 167.2 125 71.2
BcaNung05563 Brassica carinata HOM05D007948 ORTHO05D006374 1.2e-36 156.8 130 78.5
BolC2t10321H Brassica oleracea HOM05D007948 ORTHO05D006374 1.4e-34 149.8 132 75.0
BcaC04g21756 Brassica carinata HOM05D007948 ORTHO05D006374 1.2e-33 146.7 106 84.0
BcaC03g15866 Brassica carinata HOM05D007948 ORTHO05D006374 6.0e-33 144.4 111 82.9
BcaC01g01818 Brassica carinata HOM05D007948 ORTHO05D006374 7.4e-31 137.5 106 84.0
BcaC04g21372 Brassica carinata HOM05D007948 ORTHO05D006374 2.8e-30 135.6 130 56.2
BcaC02g10476 Brassica carinata HOM05D000779 ORTHO05D000246 1.8e-24 116.3 135 65.9
BcaC03g15118 Brassica carinata HOM05D007948 ORTHO05D006374 2.4e-21 105.9 132 43.9
BcaC01g01051 Brassica carinata HOM05D007948 ORTHO05D006374 2.2e-19 99.4 84 85.7
BolC7t40924H Brassica oleracea HOM05D007948 ORTHO05D006374 2.9e-19 99.0 52 76.9
BraA02t08206Z Brassica rapa HOM05D007948 ORTHO05D006374 1.6e-17 93.2 52 75.0
Sp7g07610 Schrenkiella parvula HOM05D007948 ORTHO05D006374 1.6e-17 93.2 67 65.7
Sp7g06740 Schrenkiella parvula HOM05D007948 ORTHO05D006374 2.1e-17 92.8 68 63.2
BcaC04g20586 Brassica carinata HOM05D007948 ORTHO05D006374 6.0e-17 91.3 54 79.6
SpUn0089_0010 Schrenkiella parvula HOM05D007948 ORTHO05D006374 6.0e-17 91.3 127 50.4
BcaC02g09365 Brassica carinata HOM05D007948 ORTHO05D006374 1.3e-14 83.6 46 73.9
BolC4t25756H Brassica oleracea HOM05D007948 ORTHO05D006374 1.3e-14 83.6 46 73.9
BcaB02g11411 Brassica carinata HOM05D007948 ORTHO05D006374 4.8e-14 81.6 52 65.4
BolC6t38712H Brassica oleracea HOM05D007948 ORTHO05D006374 4.8e-14 81.6 52 63.5
BcaC03g15932 Brassica carinata HOM05D007948 ORTHO05D006374 6.3e-14 81.3 52 65.4
Sp3g25440 Schrenkiella parvula HOM05D007948 ORTHO05D006374 1.8e-13 79.7 63 55.6
BolC9t57184H Brassica oleracea HOM05D007948 ORTHO05D006374 3.1e-13 79.0 52 65.4
BcaC03g14748 Brassica carinata HOM05D007948 ORTHO05D006374 4.5e-12 75.1 52 59.6
BcaC03g17091 Brassica carinata HOM05D007948 ORTHO05D006374 4.5e-12 75.1 46 69.6
BcaB07g32591 Brassica carinata HOM05D007948 ORTHO05D006374 1.1e-10 70.5 36 77.8
BolC2t08332H Brassica oleracea HOM05D007948 ORTHO05D006374 1.4e-10 70.1 50 58.0
BcaC08g45112 Brassica carinata HOM05D008134 ORTHO05D006374 1.1e-07 60.5 45 53.3
BcaC04g21528 Brassica carinata HOM05D008134 ORTHO05D006374 2.5e-07 59.3 45 51.1
C06p15100 Brassica napus HOM05D008134 ORTHO05D006374 2.5e-07 59.3 45 51.1
C09p41220 Brassica napus HOM05D008134 ORTHO05D006374 2.5e-07 59.3 45 51.1
BolC1t04558H Brassica oleracea HOM05D008134 ORTHO05D006374 2.5e-07 59.3 45 51.1
BcaB05g24055 Brassica carinata HOM05D009982 ORTHO05D006374 4.3e-07 58.5 68 47.1
C06p19630 Brassica napus HOM05D008134 ORTHO05D006374 4.3e-07 58.5 45 51.1
BolC2t08062H Brassica oleracea HOM05D008134 ORTHO05D006374 4.3e-07 58.5 45 51.1
BolC2t10247H Brassica oleracea HOM05D008134 ORTHO05D006374 5.7e-07 58.2 45 48.9
C03p11460 Brassica napus HOM05D008134 ORTHO05D006374 7.4e-07 57.8 44 50.0
C03p65520 Brassica napus HOM05D008134 ORTHO05D006374 7.4e-07 57.8 45 51.1
C06p11100 Brassica napus HOM05D009982 ORTHO05D006374 7.4e-07 57.8 59 45.8
BolC2t11326H Brassica oleracea HOM05D007948 ORTHO05D006374 7.4e-07 57.8 109 45.0
BolC3t19235H Brassica oleracea HOM05D009982 ORTHO05D006374 9.7e-07 57.4 58 46.6
C04p38260 Brassica napus HOM05D008134 ORTHO05D006374 1.3e-06 57.0 43 51.2
BcaC04g21764 Brassica carinata HOM05D009982 ORTHO05D006374 3.7e-06 55.5 61 47.5
BcaB02g06512 Brassica carinata HOM05D009982 ORTHO05D006374 6.3e-06 54.7 68 45.6
BolC6t36230H Brassica oleracea HOM05D009982 ORTHO05D006374 8.2e-06 54.3 59 44.1
BolC8t48827H Brassica oleracea HOM05D009982 ORTHO05D006374 8.2e-06 54.3 61 47.5


User provided reference genes

Program Settings