Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g02006 Brassica carinata HOM05D007948 ORTHO05D006374 5.7e-119 431.0 232 100.0
BcaC02g08352 Brassica carinata HOM05D007948 ORTHO05D006374 9.8e-95 350.5 255 79.6
BolC2t10322H Brassica oleracea HOM05D007948 ORTHO05D006374 1.0e-88 330.5 255 76.1
BcaB04g17045 Brassica carinata HOM05D007948 ORTHO05D006374 8.9e-88 327.4 249 75.9
BcaC03g16472 Brassica carinata HOM05D007948 ORTHO05D006374 3.0e-75 285.8 245 71.4
BolC4t24390H Brassica oleracea HOM05D007948 ORTHO05D006374 3.5e-68 262.3 142 92.3
BcaC01g01818 Brassica carinata HOM05D007948 ORTHO05D006374 1.2e-57 227.3 129 89.9
BcaC07g39986 Brassica carinata HOM05D007948 ORTHO05D006374 9.6e-50 201.1 118 85.6
BcaC06g36333 Brassica carinata HOM05D007948 ORTHO05D006374 2.6e-47 193.0 259 50.6
BcaC03g15865 Brassica carinata HOM05D007948 ORTHO05D006374 3.4e-47 192.6 149 71.1
BcaC04g20586 Brassica carinata HOM05D007948 ORTHO05D006374 1.6e-41 173.7 134 72.4
BcaNung05563 Brassica carinata HOM05D007948 ORTHO05D006374 9.0e-40 167.9 157 65.6
BcaC02g10476 Brassica carinata HOM05D000779 ORTHO05D000246 1.5e-34 150.6 131 65.6
BcaC01g01349 Brassica carinata HOM05D007948 ORTHO05D006374 4.3e-34 149.1 246 44.7
SpUn0396_0010 Schrenkiella parvula HOM05D007948 ORTHO05D006374 9.6e-34 147.9 140 55.0
Sp7g07610 Schrenkiella parvula HOM05D007948 ORTHO05D006374 2.1e-33 146.7 140 55.0
BcaB07g33122 Brassica carinata HOM05D007948 ORTHO05D006374 4.5e-31 139.0 150 53.3
BcaC02g10756 Brassica carinata HOM05D007948 ORTHO05D006374 3.8e-30 136.0 129 55.8
SpUn0001_0790 Schrenkiella parvula HOM05D007948 ORTHO05D006374 1.1e-29 134.4 137 53.3
BcaB04g17952 Brassica carinata HOM05D007948 ORTHO05D006374 2.5e-29 133.3 77 88.3
Sp4g09500 Schrenkiella parvula HOM05D007948 ORTHO05D006374 7.9e-28 128.3 150 49.3
BraA01t03624Z Brassica rapa HOM05D007948 ORTHO05D006374 3.9e-27 125.9 151 47.0
SpUn0089_0010 Schrenkiella parvula HOM05D007948 ORTHO05D006374 1.1e-26 124.4 202 37.6
Sp2g05060 Schrenkiella parvula HOM05D007948 ORTHO05D006374 5.3e-24 115.5 220 35.5
Sp7g06740 Schrenkiella parvula HOM05D007948 ORTHO05D006374 5.9e-23 112.1 146 44.5
BcaC03g16243 Brassica carinata HOM05D007948 ORTHO05D006374 8.5e-22 108.2 164 37.8
BcaB03g16346 Brassica carinata HOM05D007948 ORTHO05D006374 1.9e-21 107.1 148 47.3
BcaC05g26145 Brassica carinata HOM05D007948 ORTHO05D006374 3.9e-19 99.4 121 62.8
Sp5g18200 Schrenkiella parvula HOM05D007948 ORTHO05D006374 8.8e-19 98.2 193 35.2
BcaC04g21372 Brassica carinata HOM05D007948 ORTHO05D006374 1.5e-18 97.4 180 45.6
Sp4g06020 Schrenkiella parvula HOM05D007948 ORTHO05D006374 4.3e-18 95.9 92 57.6
BolC9t57184H Brassica oleracea HOM05D007948 ORTHO05D006374 9.7e-18 94.7 186 32.8
Sp1g31350 Schrenkiella parvula HOM05D008266 ORTHO05D000062 4.8e-17 92.4 185 38.9
Sp1g30400 Schrenkiella parvula HOM05D007948 ORTHO05D006374 4.1e-16 89.4 86 52.3
BcaC04g21242 Brassica carinata HOM05D012379 ORTHO05D032417 2.2e-14 83.6 58 63.8
BcaC03g14749 Brassica carinata HOM05D007948 ORTHO05D006374 2.9e-14 83.2 137 36.5
BolC6t38712H Brassica oleracea HOM05D007948 ORTHO05D006374 6.5e-14 82.0 163 34.4
Sp3g25440 Schrenkiella parvula HOM05D007948 ORTHO05D006374 8.5e-14 81.6 184 30.4
BraA09t38613Z Brassica rapa HOM05D007948 ORTHO05D006374 1.4e-13 80.9 64 67.2
BcaC09g48265 Brassica carinata HOM05D007948 ORTHO05D006374 4.2e-13 79.3 82 70.7
Sp1g33010 Schrenkiella parvula HOM05D007948 ORTHO05D035219 2.1e-12 77.0 211 31.3
BcaB02g11411 Brassica carinata HOM05D007948 ORTHO05D006374 2.7e-12 76.6 154 33.8
Sp5g18930 Schrenkiella parvula HOM05D007948 ORTHO05D006374 4.7e-12 75.9 205 29.3
SpUn0054_0020 Schrenkiella parvula HOM05D007948 ORTHO05D006374 4.7e-12 75.9 205 29.3
Sp6g08730 Schrenkiella parvula HOM05D007948 ORTHO05D006374 7.9e-12 75.1 208 27.4
BcaC02g09365 Brassica carinata HOM05D007948 ORTHO05D006374 3.0e-11 73.2 116 37.9
BolC3t19236H Brassica oleracea HOM05D009982 ORTHO05D006374 5.1e-11 72.4 190 27.9
SpUn0007_0160 Schrenkiella parvula HOM05D007948 ORTHO05D006374 1.1e-10 71.2 161 31.7
BolC7t43939H Brassica oleracea HOM05D009982 ORTHO05D006374 1.5e-10 70.9 190 26.3
BolC6t36230H Brassica oleracea HOM05D009982 ORTHO05D006374 2.6e-10 70.1 171 27.5
BolC9t54058H Brassica oleracea HOM05D009982 ORTHO05D006374 7.4e-10 68.6 190 25.8
BcaC03g15931 Brassica carinata HOM05D007948 ORTHO05D006374 2.8e-09 66.6 155 29.7
BraA01t02505Z Brassica rapa HOM05D007948 ORTHO05D039081 3.7e-09 66.2 130 41.5
Sp2g06250 Schrenkiella parvula HOM05D008134 ORTHO05D006374 4.8e-09 65.9 116 35.3
BcaC01g04963 Brassica carinata HOM05D007948 ORTHO05D006374 8.2e-09 65.1 65 56.9
AT4G03728 Arabidopsis thaliana HOM05D007948 ORTHO05D006374 1.1e-08 64.7 76 46.1
BcaC03g15118 Brassica carinata HOM05D007948 ORTHO05D006374 2.6e-07 60.1 53 49.1
SpUn0005_0100 Schrenkiella parvula HOM05D008134 ORTHO05D006374 3.4e-07 59.7 157 28.7
SpUn0901_0010 Schrenkiella parvula HOM05D008134 ORTHO05D006374 3.4e-07 59.7 149 32.2
Sp1g30650 Schrenkiella parvula HOM05D008134 ORTHO05D006374 4.5e-07 59.3 142 31.0
BolC4t25756H Brassica oleracea HOM05D007948 ORTHO05D006374 7.7e-07 58.5 100 36.0
BcaB05g23202 Brassica carinata HOM05D007948 ORTHO05D006374 2.2e-06 57.0 101 31.7
C03p57080 Brassica napus HOM05D008134 ORTHO05D012640 6.5e-06 55.5 112 36.6


User provided reference genes

Program Settings