Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g01876 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-46 189.1 96 100.0
BcaC07g39538 Brassica carinata HOM05D000496 ORTHO05D000411 3.7e-16 88.2 45 95.6
BcaC05g27815 Brassica carinata HOM05D000496 ORTHO05D000411 8.3e-16 87.0 45 93.3
BcaC02g08910 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-15 86.3 45 91.1
BcaC03g15984 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-15 85.1 78 60.3
BcaC03g15107 Brassica carinata HOM05D000496 ORTHO05D000411 7.8e-14 80.5 60 70.0
BolC2t08741H Brassica oleracea HOM05D000496 ORTHO05D019920 7.8e-14 80.5 60 70.0
BcaC05g27902 Brassica carinata HOM05D000496 ORTHO05D000411 3.9e-13 78.2 45 80.0
BcaC03g15800 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-11 72.8 58 63.8
BraA01t03743Z Brassica rapa HOM05D000496 ORTHO05D019920 2.8e-11 72.0 55 67.3
BcaC07g37237 Brassica carinata HOM05D000496 ORTHO05D000411 3.6e-11 71.6 45 75.6
BcaB06g26647 Brassica carinata HOM05D000496 ORTHO05D000411 4.7e-11 71.2 58 55.2
BcaC04g21355 Brassica carinata HOM05D000496 ORTHO05D000411 4.7e-11 71.2 45 75.6
BcaC08g46179 Brassica carinata HOM05D000496 ORTHO05D000411 6.2e-11 70.9 60 63.3
BcaB07g32484 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-10 69.3 44 75.0
BcaC06g36711 Brassica carinata HOM05D000496 ORTHO05D000411 2.4e-10 68.9 45 68.9
BcaB03g14222 Brassica carinata HOM05D000496 ORTHO05D000411 3.1e-10 68.6 45 71.1
BcaC04g21193 Brassica carinata HOM05D000496 ORTHO05D000411 5.2e-10 67.8 76 50.0
BcaC09g47909 Brassica carinata HOM05D000496 ORTHO05D000411 8.9e-10 67.0 58 56.9
BcaC03g16657 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-09 66.6 58 58.6
BcaC09g49414 Brassica carinata HOM05D000496 ORTHO05D094999 1.2e-09 66.6 42 81.0
BcaC07g38782 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-09 66.2 58 62.1
BolC5t32675H Brassica oleracea HOM05D000496 ORTHO05D000411 2.0e-09 65.9 44 65.9
BcaC05g28640 Brassica carinata HOM05D000496 ORTHO05D014937 2.6e-09 65.5 51 72.5
BcaC08g44039 Brassica carinata HOM05D000496 ORTHO05D014937 2.6e-09 65.5 45 64.4
BcaB01g02818 Brassica carinata HOM05D000496 ORTHO05D000411 3.4e-09 65.1 56 53.6
BcaC01g01817 Brassica carinata HOM05D000496 ORTHO05D000411 3.4e-09 65.1 45 64.4
BcaC01g02264 Brassica carinata HOM05D000496 ORTHO05D019920 3.4e-09 65.1 58 58.6
BcaC03g14957 Brassica carinata HOM05D000496 ORTHO05D000411 3.4e-09 65.1 46 63.0
BcaC08g43480 Brassica carinata HOM05D000496 ORTHO05D000411 3.4e-09 65.1 45 71.1
BolC3t19004H Brassica oleracea HOM05D000496 ORTHO05D019920 3.4e-09 65.1 58 58.6
BolC3t19455H Brassica oleracea HOM05D000496 ORTHO05D032668 3.4e-09 65.1 45 64.4
BcaNung04302 Brassica carinata HOM05D000496 ORTHO05D000411 4.4e-09 64.7 58 55.2
BolC9t55777H Brassica oleracea HOM05D000496 ORTHO05D000411 4.4e-09 64.7 45 66.7
BcaC02g09892 Brassica carinata HOM05D000496 ORTHO05D032642 5.8e-09 64.3 60 58.3
BcaC03g15709 Brassica carinata HOM05D000496 ORTHO05D000411 5.8e-09 64.3 83 47.0
BraA04t16615Z Brassica rapa HOM05D000496 ORTHO05D000411 5.8e-09 64.3 58 56.9
BcaC01g02211 Brassica carinata HOM05D000496 ORTHO05D000411 7.6e-09 63.9 58 56.9
BolSC21t60240H Brassica oleracea HOM05D000496 ORTHO05D000411 7.6e-09 63.9 58 56.9
BcaB06g26381 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-08 63.2 45 64.4
BcaC03g14200 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-08 62.8 83 45.8
BcaB04g17470 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-08 62.4 45 66.7
BcaC08g44730 Brassica carinata HOM05D000496 ORTHO05D019920 2.2e-08 62.4 88 44.3
BcaB06g28121 Brassica carinata HOM05D000496 ORTHO05D000411 2.9e-08 62.0 45 64.4
BcaC04g19440 Brassica carinata HOM05D000496 ORTHO05D000411 2.9e-08 62.0 53 60.4
BcaB08g35328 Brassica carinata HOM05D000496 ORTHO05D000411 3.8e-08 61.6 58 51.7
BcaC01g01239 Brassica carinata HOM05D000496 ORTHO05D000411 3.8e-08 61.6 53 58.5
BcaC02g07871 Brassica carinata HOM05D000496 ORTHO05D000411 3.8e-08 61.6 58 48.3
BcaC04g23650 Brassica carinata HOM05D000496 ORTHO05D000411 3.8e-08 61.6 85 41.2
A05p20030 Brassica napus HOM05D000496 ORTHO05D014937 3.8e-08 61.6 73 50.7
BraA05t20909Z Brassica rapa HOM05D000496 ORTHO05D014937 3.8e-08 61.6 73 50.7
BolC3t17901H Brassica oleracea HOM05D000496 ORTHO05D000411 4.9e-08 61.2 45 60.0
BcaB08g35848 Brassica carinata HOM05D000496 ORTHO05D000411 8.4e-08 60.5 45 60.0
BcaC03g15417 Brassica carinata HOM05D000496 ORTHO05D000411 8.4e-08 60.5 45 62.2
C06p42420 Brassica napus HOM05D000496 ORTHO05D000411 8.4e-08 60.5 45 62.2
BcaC02g09460 Brassica carinata HOM05D000496 ORTHO05D014937 1.1e-07 60.1 86 44.2
BcaC08g44837 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-07 60.1 53 58.5
BcaC03g14607 Brassica carinata HOM05D000496 ORTHO05D031790 1.4e-07 59.7 53 58.5
BcaC09g50802 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-07 59.7 58 51.7
BolC5t33757H Brassica oleracea HOM05D000496 ORTHO05D014937 1.4e-07 59.7 85 44.7
BcaC01g01165 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-07 59.3 58 53.4
BcaC02g10380 Brassica carinata HOM05D000496 ORTHO05D000411 2.4e-07 58.9 84 45.2
C06p36470 Brassica napus HOM05D030143 ORTHO05D039637 2.4e-07 58.9 78 44.9
BcaC01g01905 Brassica carinata HOM05D000496 ORTHO05D014937 3.2e-07 58.5 78 47.4
BcaC06g36700 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-07 58.5 53 56.6
BolC1t03568H Brassica oleracea HOM05D000496 ORTHO05D000411 3.2e-07 58.5 58 51.7
BolC1t05084H Brassica oleracea HOM05D000496 ORTHO05D000411 3.2e-07 58.5 58 48.3
C06p14200 Brassica napus HOM05D000496 ORTHO05D000411 4.2e-07 58.2 58 48.3
BraA08t32350Z Brassica rapa HOM05D000496 ORTHO05D027404 4.2e-07 58.2 45 60.0
BolC4t26549H Brassica oleracea HOM05D000496 ORTHO05D000411 5.4e-07 57.8 53 56.6
BcaC07g37461 Brassica carinata HOM05D000496 ORTHO05D014937 9.3e-07 57.0 78 43.6
BcaB04g17691 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-06 56.6 45 55.6
BcaC03g16242 Brassica carinata HOM05D030143 ORTHO05D002152 1.2e-06 56.6 78 43.6
BcaC05g25070 Brassica carinata HOM05D030143 ORTHO05D039637 1.2e-06 56.6 78 43.6
BcaC08g43454 Brassica carinata HOM05D000496 ORTHO05D031880 1.2e-06 56.6 49 59.2
BcaC04g22137 Brassica carinata HOM05D000496 ORTHO05D019920 1.6e-06 56.2 78 43.6
BcaC05g29488 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-06 56.2 45 60.0
BcaC05g30568 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-06 56.2 45 57.8
BcaC01g00534 Brassica carinata HOM05D000020 ORTHO05D000543 2.1e-06 55.8 58 44.8
BcaC04g19439 Brassica carinata HOM05D000496 ORTHO05D000411 2.1e-06 55.8 45 60.0
BcaC05g26989 Brassica carinata HOM05D000496 ORTHO05D000411 2.1e-06 55.8 54 46.3
BcaB01g02232 Brassica carinata HOM05D000496 ORTHO05D000411 2.7e-06 55.5 45 57.8
BcaB04g17268 Brassica carinata HOM05D000496 ORTHO05D000411 3.5e-06 55.1 45 62.2
BcaC01g03089 Brassica carinata HOM05D000496 ORTHO05D000411 3.5e-06 55.1 79 43.0
BcaC04g21671 Brassica carinata HOM05D000496 ORTHO05D000411 3.5e-06 55.1 79 43.0
BcaC06g34334 Brassica carinata HOM05D000496 ORTHO05D039093 4.6e-06 54.7 82 40.2
BcaC08g45123 Brassica carinata HOM05D000496 ORTHO05D000411 4.6e-06 54.7 49 57.1
BolC7t43560H Brassica oleracea HOM05D000496 ORTHO05D039093 4.6e-06 54.7 82 40.2
BcaC04g22204 Brassica carinata HOM05D000496 ORTHO05D000411 6.0e-06 54.3 53 52.8
BcaC09g48334 Brassica carinata HOM05D000496 ORTHO05D000411 6.0e-06 54.3 54 48.1
BolC7t41272H Brassica oleracea HOM05D000496 ORTHO05D000411 6.0e-06 54.3 53 50.9


User provided reference genes

Program Settings