Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g01840 Brassica carinata HOM05D008386 ORTHO05D010572 2.3e-108 395.6 203 100.0
BcaC05g26479 Brassica carinata HOM05D008386 ORTHO05D010572 2.9e-90 335.5 202 84.2
BcaC03g15124 Brassica carinata HOM05D008386 ORTHO05D010572 3.1e-84 315.5 202 83.2
BcaC07g38132 Brassica carinata HOM05D008386 ORTHO05D010572 2.1e-69 266.2 160 86.9
BcaB08g35499 Brassica carinata HOM05D008386 ORTHO05D010572 4.7e-69 265.0 197 70.1
BcaB04g18086 Brassica carinata HOM05D008386 ORTHO05D010572 1.6e-64 250.0 197 68.0
BcaB08g35205 Brassica carinata HOM05D008386 ORTHO05D010572 2.3e-63 246.1 216 62.0
BcaC02g10683 Brassica carinata HOM05D008386 ORTHO05D010572 6.4e-58 228.0 135 83.7
BcaC08g42828 Brassica carinata HOM05D008386 ORTHO05D010572 4.6e-56 221.9 135 80.0
BcaC01g02130 Brassica carinata HOM05D008386 ORTHO05D010572 1.7e-55 219.9 134 83.6
BcaC02g10386 Brassica carinata HOM05D008386 ORTHO05D010572 1.5e-54 216.9 134 82.1
BcaC04g21234 Brassica carinata HOM05D008386 ORTHO05D010572 9.0e-52 207.6 134 80.6
BcaC09g49551 Brassica carinata HOM05D008386 ORTHO05D010572 2.0e-51 206.5 135 77.8
BcaC04g20778 Brassica carinata HOM05D008386 ORTHO05D010572 6.4e-50 201.4 135 77.0
BcaC02g11960 Brassica carinata HOM05D006121 ORTHO05D009559 2.1e-48 196.4 202 59.4
BolC9t57206H Brassica oleracea HOM05D008386 ORTHO05D010572 1.7e-47 193.4 156 67.9
BcaC09g49299 Brassica carinata HOM05D006121 ORTHO05D009559 3.7e-37 159.1 128 69.5
BraA01t02430Z Brassica rapa HOM05D008386 ORTHO05D010572 1.2e-35 154.1 176 51.1
BcaC01g06835 Brassica carinata HOM05D006121 ORTHO05D009559 7.9e-32 141.4 128 61.7
BolC1t03080H Brassica oleracea HOM05D008386 ORTHO05D010572 2.7e-24 116.3 114 54.4
BcaC03g16398 Brassica carinata HOM05D008386 ORTHO05D010572 1.8e-20 103.6 61 85.2
BcaC02g11248 Brassica carinata HOM05D006121 ORTHO05D009559 4.5e-19 99.0 128 52.3
Carub.0003s2904 Capsella rubella HOM05D006121 ORTHO05D009559 5.9e-19 98.6 217 31.8
BolC6t38412H Brassica oleracea HOM05D008386 ORTHO05D010572 2.2e-18 96.7 100 56.0
BcaC02g10591 Brassica carinata HOM05D008386 ORTHO05D010572 3.8e-18 95.9 60 81.7
BcaC04g20758 Brassica carinata HOM05D008386 ORTHO05D010572 1.9e-17 93.6 60 80.0
BcaC01g02164 Brassica carinata HOM05D008386 ORTHO05D010572 4.2e-17 92.4 60 81.7
BcaC01g02121 Brassica carinata HOM05D008386 ORTHO05D010572 5.5e-17 92.0 60 78.3
BolC7t41206H Brassica oleracea HOM05D008386 ORTHO05D010572 7.2e-17 91.7 61 78.7
BcaC07g38207 Brassica carinata HOM05D008386 ORTHO05D010572 1.6e-16 90.5 60 80.0
Carub.0001s3399 Capsella rubella HOM05D008386 ORTHO05D010572 3.0e-15 86.3 200 28.0
BcaC05g27433 Brassica carinata HOM05D006121 ORTHO05D009559 2.5e-14 83.2 164 33.5
BcaC06g36507 Brassica carinata HOM05D006121 ORTHO05D009559 5.7e-14 82.0 86 45.3
BcaC01g02238 Brassica carinata HOM05D006121 ORTHO05D009559 1.8e-12 77.0 183 32.8
BraA09t38607Z Brassica rapa HOM05D006121 ORTHO05D009559 1.8e-12 77.0 156 32.7
BcaB04g18085 Brassica carinata HOM05D008386 ORTHO05D010572 3.1e-12 76.3 74 59.5
BcaC06g35988 Brassica carinata HOM05D006121 ORTHO05D009559 4.1e-12 75.9 120 33.3
BraA02t07645Z Brassica rapa HOM05D008386 ORTHO05D010572 5.3e-12 75.5 60 61.7
BcaC03g17371 Brassica carinata HOM05D006121 ORTHO05D009559 1.3e-10 70.9 124 35.5
BolC3t20162H Brassica oleracea HOM05D008386 ORTHO05D010572 1.1e-09 67.8 43 81.4
BcaC03g16371 Brassica carinata HOM05D006121 ORTHO05D009559 1.9e-09 67.0 69 47.8
BcaC07g37355 Brassica carinata HOM05D008386 ORTHO05D010572 7.2e-09 65.1 43 79.1
BcaC04g23066 Brassica carinata HOM05D006121 ORTHO05D009559 3.6e-08 62.8 84 41.7
BolC3t19364H Brassica oleracea HOM05D008386 ORTHO05D010572 1.5e-06 57.4 72 52.8
CARHR216340 Cardamine hirsuta HOM05D008386 ORTHO05D010572 1.5e-06 57.4 81 35.8


User provided reference genes

Program Settings