Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g01829 Brassica carinata HOM05D004489 ORTHO05D010056 1.5e-110 402.9 215 100.0
C07p01860 Brassica napus HOM05D004489 ORTHO05D010056 3.0e-82 308.9 208 83.2
BcaC08g45661 Brassica carinata HOM05D004489 ORTHO05D010056 1.2e-78 297.0 208 80.3
C02p47420 Brassica napus HOM05D004489 ORTHO05D010056 1.0e-77 293.9 208 79.8
BcaC03g16680 Brassica carinata HOM05D004489 ORTHO05D010056 1.5e-76 290.0 208 78.8
BcaC05g29022 Brassica carinata HOM05D004489 ORTHO05D010056 4.2e-76 288.5 208 78.8
C05p52380 Brassica napus HOM05D004489 ORTHO05D010056 4.2e-76 288.5 208 78.8
BcaC04g20631 Brassica carinata HOM05D004489 ORTHO05D010056 1.4e-74 283.5 208 76.9
C07p03810 Brassica napus HOM05D004489 ORTHO05D010056 1.4e-74 283.5 208 76.9
C09p41300 Brassica napus HOM05D004489 ORTHO05D010056 1.4e-74 283.5 208 76.9
BcaC09g51560 Brassica carinata HOM05D004489 ORTHO05D010056 1.8e-74 283.1 179 86.6
BolC7t40773H Brassica oleracea HOM05D004489 ORTHO05D010056 1.2e-73 280.4 208 76.0
BcaC04g22095 Brassica carinata HOM05D004489 ORTHO05D000493 2.0e-73 279.6 208 76.0
BolC9t55268H Brassica oleracea HOM05D004489 ORTHO05D010056 2.0e-73 279.6 208 76.0
BcaC07g38503 Brassica carinata HOM05D004489 ORTHO05D010056 6.3e-72 274.6 207 77.3
BcaC03g14954 Brassica carinata HOM05D004489 ORTHO05D010056 2.4e-71 272.7 208 74.5
BolC2t08562H Brassica oleracea HOM05D004489 ORTHO05D010056 4.1e-71 271.9 208 75.0
BcaC02g11524 Brassica carinata HOM05D004489 ORTHO05D010056 1.7e-69 266.5 177 81.9
BcaC02g07770 Brassica carinata HOM05D004489 ORTHO05D010056 1.4e-66 256.9 187 78.1
C09p20870 Brassica napus HOM05D004489 ORTHO05D010056 2.6e-65 252.7 208 72.6
BolC9t54984H Brassica oleracea HOM05D004489 ORTHO05D010056 2.6e-65 252.7 208 72.6
BcaNung03342 Brassica carinata HOM05D004489 ORTHO05D010056 7.0e-63 244.6 175 78.3
BcaC04g20751 Brassica carinata HOM05D004489 ORTHO05D010056 5.0e-61 238.4 210 68.6
BcaC04g22309 Brassica carinata HOM05D004489 ORTHO05D010056 3.3e-60 235.7 142 89.4
C07p23290 Brassica napus HOM05D004489 ORTHO05D010056 7.3e-60 234.6 192 70.8
BcaC01g00378 Brassica carinata HOM05D004489 ORTHO05D010056 1.2e-59 233.8 210 66.2
BcaC07g38382 Brassica carinata HOM05D004489 ORTHO05D010056 8.0e-59 231.1 205 67.8
C09p34080 Brassica napus HOM05D004489 ORTHO05D010056 2.6e-57 226.1 205 66.3
C01p35260 Brassica napus HOM05D004489 ORTHO05D010056 4.4e-57 225.3 205 66.3
C06p10210 Brassica napus HOM05D004489 ORTHO05D010056 4.4e-57 225.3 186 71.5
BolC1t03483H Brassica oleracea HOM05D004489 ORTHO05D010056 4.4e-57 225.3 205 66.3
BolC3t18663H Brassica oleracea HOM05D004489 ORTHO05D010056 4.4e-57 225.3 166 75.9
BcaC03g15256 Brassica carinata HOM05D004489 ORTHO05D010056 9.8e-57 224.2 179 72.6
BolC9t56245H Brassica oleracea HOM05D004489 ORTHO05D010056 1.7e-56 223.4 205 65.9
C01p35220 Brassica napus HOM05D004489 ORTHO05D010056 3.7e-56 222.2 166 75.9
C03p64090 Brassica napus HOM05D004489 ORTHO05D010056 3.2e-55 219.2 166 74.1
BcaC06g36646 Brassica carinata HOM05D004489 ORTHO05D010056 9.2e-55 217.6 125 92.8
C08p08580 Brassica napus HOM05D004489 ORTHO05D010056 9.2e-55 217.6 183 69.4
BcaC07g37389 Brassica carinata HOM05D004489 ORTHO05D010056 2.0e-54 216.5 183 69.4
BolC8t47699H Brassica oleracea HOM05D004489 ORTHO05D010056 2.0e-54 216.5 183 69.4
C05p26780 Brassica napus HOM05D004489 ORTHO05D010056 5.9e-54 214.9 152 78.3
A06p23470 Brassica napus HOM05D004489 ORTHO05D010056 7.8e-54 214.5 204 63.7
C09p39590 Brassica napus HOM05D004489 ORTHO05D010056 1.5e-52 210.3 181 68.5
BolC8t47151H Brassica oleracea HOM05D004489 ORTHO05D010056 1.5e-52 210.3 182 68.1
BcaC07g37478 Brassica carinata HOM05D004489 ORTHO05D010056 4.3e-52 208.8 117 93.2
BcaC05g28262 Brassica carinata HOM05D004489 ORTHO05D010056 9.5e-52 207.6 208 62.0
BcaC09g51020 Brassica carinata HOM05D004489 ORTHO05D010056 1.4e-50 203.8 122 87.7
BolC7t42863H Brassica oleracea HOM05D004489 ORTHO05D010056 1.4e-50 203.8 208 61.5
C02p24700 Brassica napus HOM05D004489 ORTHO05D098125 4.4e-49 198.7 129 82.2
C02p21030 Brassica napus HOM05D004489 ORTHO05D010056 2.2e-48 196.4 159 71.1
C08p18050 Brassica napus HOM05D004489 ORTHO05D021897 2.2e-48 196.4 150 72.7
BolC8t49437H Brassica oleracea HOM05D004489 ORTHO05D021897 2.2e-48 196.4 150 72.7
C05p22010 Brassica napus HOM05D004489 ORTHO05D010056 3.7e-48 195.7 178 65.2
C06p25970 Brassica napus HOM05D004489 ORTHO05D021897 3.7e-48 195.7 135 77.8
BolC5t30898H Brassica oleracea HOM05D004489 ORTHO05D010056 4.9e-48 195.3 179 64.2
BcaC04g18700 Brassica carinata HOM05D004489 ORTHO05D010056 2.5e-44 183.0 138 74.6
BcaC04g20961 Brassica carinata HOM05D004489 ORTHO05D032456 3.3e-44 182.6 152 70.4
BcaC09g48389 Brassica carinata HOM05D004489 ORTHO05D010056 1.2e-43 180.6 128 77.3
BraA06t25443Z Brassica rapa HOM05D004489 ORTHO05D010056 1.2e-43 180.6 169 64.5
BcaC02g10072 Brassica carinata HOM05D004489 ORTHO05D090663 5.2e-42 175.3 171 62.0
C09p37510 Brassica napus HOM05D004489 ORTHO05D032456 2.9e-40 169.5 121 76.9
BolC9t56581H Brassica oleracea HOM05D004489 ORTHO05D032456 2.9e-40 169.5 121 76.9
BcaC05g26196 Brassica carinata HOM05D004489 ORTHO05D010056 1.4e-39 167.2 124 74.2
BcaB06g26545 Brassica carinata HOM05D004489 ORTHO05D095075 7.1e-39 164.9 192 53.6
C01p30160 Brassica napus HOM05D004489 ORTHO05D010056 1.2e-38 164.1 206 54.4
C01p50400 Brassica napus HOM05D004489 ORTHO05D010056 1.6e-38 163.7 143 66.4
C08p11390 Brassica napus HOM05D004489 ORTHO05D010056 4.6e-38 162.2 143 65.7
BolC1t01193H Brassica oleracea HOM05D004489 ORTHO05D010056 3.0e-37 159.5 94 88.3
C07p20720 Brassica napus HOM05D004489 ORTHO05D010056 6.6e-37 158.3 122 73.8
C07p01700 Brassica napus HOM05D004489 ORTHO05D010056 8.6e-37 157.9 132 71.2
BraA04t16648Z Brassica rapa HOM05D004489 ORTHO05D018788 2.5e-36 156.4 175 58.3
BcaC06g36060 Brassica carinata HOM05D004489 ORTHO05D092528 4.3e-36 155.6 183 54.6
BolC6t37769H Brassica oleracea HOM05D004489 ORTHO05D010056 7.3e-36 154.8 105 78.1
C02p57490 Brassica napus HOM05D004489 ORTHO05D010056 1.2e-35 154.1 205 53.7
C01p27340 Brassica napus HOM05D004489 ORTHO05D010056 1.6e-35 153.7 143 62.9
BolC7t42604H Brassica oleracea HOM05D004489 ORTHO05D010056 3.6e-35 152.5 161 60.2
BolC2t08244H Brassica oleracea HOM05D004489 ORTHO05D010056 8.9e-34 147.9 142 62.0
BcaB03g16202 Brassica carinata HOM05D004489 ORTHO05D093905 9.9e-33 144.4 134 61.9
BcaB04g17396 Brassica carinata HOM05D004489 ORTHO05D095687 2.2e-32 143.3 157 52.9
BcaB01g01689 Brassica carinata HOM05D004489 ORTHO05D095684 3.8e-32 142.5 153 56.2
BcaC03g17739 Brassica carinata HOM05D004489 ORTHO05D010056 3.2e-31 139.4 103 73.8
BcaB02g10531 Brassica carinata HOM05D004489 ORTHO05D094500 3.5e-30 136.0 178 49.4
BcaC04g19493 Brassica carinata HOM05D004489 ORTHO05D010056 3.0e-29 132.9 137 60.6
C09p55140 Brassica napus HOM05D004489 ORTHO05D010056 6.6e-29 131.7 91 75.8
C06p26040 Brassica napus HOM05D004489 ORTHO05D010056 8.6e-29 131.3 185 49.7
BcaC04g22067 Brassica carinata HOM05D004489 ORTHO05D027587 1.1e-28 131.0 126 64.3
A07p11790 Brassica napus HOM05D004489 ORTHO05D010056 2.5e-28 129.8 162 53.7
BolC9t58376H Brassica oleracea HOM05D004489 ORTHO05D018788 5.6e-28 128.6 189 48.7
BolC5t31966H Brassica oleracea HOM05D004489 ORTHO05D018788 9.6e-28 127.9 179 49.7
A04p09860 Brassica napus HOM05D004489 ORTHO05D010056 1.8e-26 123.6 85 76.5
A05p21780 Brassica napus HOM05D004489 ORTHO05D027587 2.4e-26 123.2 110 63.6
BraA05t21099Z Brassica rapa HOM05D004489 ORTHO05D027587 2.4e-26 123.2 110 63.6
BcaB01g01502 Brassica carinata HOM05D004489 ORTHO05D094885 8.9e-26 121.3 162 49.4
BraA07t28964Z Brassica rapa HOM05D004489 ORTHO05D010056 1.5e-25 120.6 172 50.0
BcaB01g01214 Brassica carinata HOM05D004489 ORTHO05D000740 4.4e-25 119.0 184 49.5
A05p21690 Brassica napus HOM05D004489 ORTHO05D100974 7.6e-25 118.2 132 57.6
BcaB07g33397 Brassica carinata HOM05D004489 ORTHO05D000740 9.9e-25 117.9 184 48.9
BcaC08g44969 Brassica carinata HOM05D004489 ORTHO05D010056 9.9e-25 117.9 78 75.6
BcaC05g26627 Brassica carinata HOM05D004489 ORTHO05D010056 1.3e-24 117.5 78 76.9
BolC4t27228H Brassica oleracea HOM05D004489 ORTHO05D018788 2.2e-24 116.7 161 50.9
BcaB08g35381 Brassica carinata HOM05D004489 ORTHO05D091739 6.4e-24 115.2 183 47.0
BcaC03g16777 Brassica carinata HOM05D004489 ORTHO05D027759 6.4e-24 115.2 167 45.5
BolC9t55309H Brassica oleracea HOM05D004489 ORTHO05D027587 5.4e-23 112.1 110 62.7
BraA02t07746Z Brassica rapa HOM05D004489 ORTHO05D018788 1.2e-22 110.9 134 53.7
BraA07t28336Z Brassica rapa HOM05D004489 ORTHO05D018788 2.7e-22 109.8 173 46.2
BcaB03g16455 Brassica carinata HOM05D004489 ORTHO05D005643 3.5e-22 109.4 181 47.0
C07p01670 Brassica napus HOM05D008277 ORTHO05D018788 7.8e-22 108.2 179 44.1
BcaB03g16167 Brassica carinata HOM05D004489 ORTHO05D091635 5.1e-21 105.5 184 46.2
BolC2t10703H Brassica oleracea HOM05D004489 ORTHO05D027759 6.6e-21 105.1 73 75.3
BcaB06g27095 Brassica carinata HOM05D004489 ORTHO05D095035 8.7e-21 104.8 142 48.6
BcaB07g33270 Brassica carinata HOM05D000888 ORTHO05D000740 1.9e-20 103.6 139 51.8
A01p27750 Brassica napus HOM05D004489 ORTHO05D000199 1.9e-20 103.6 104 62.5
A01p28040 Brassica napus HOM05D004489 ORTHO05D018788 3.3e-20 102.8 173 43.4
BraA05t20820Z Brassica rapa HOM05D004489 ORTHO05D027759 5.6e-20 102.1 73 76.7
BcaB05g24918 Brassica carinata HOM05D004489 ORTHO05D092070 7.3e-20 101.7 178 39.9
BcaC08g44976 Brassica carinata HOM05D004489 ORTHO05D010056 1.3e-19 100.9 79 73.4
A05p19170 Brassica napus HOM05D004489 ORTHO05D027759 2.1e-19 100.1 73 75.3
BcaC01g03828 Brassica carinata HOM05D004489 ORTHO05D010056 1.1e-18 97.8 74 70.3
BcaNung05365 Brassica carinata HOM05D004489 ORTHO05D094850 5.3e-18 95.5 82 69.5
BcaB05g23045 Brassica carinata HOM05D008277 ORTHO05D093753 1.5e-17 94.0 122 54.1
BcaC04g21271 Brassica carinata HOM05D004489 ORTHO05D039740 1.5e-17 94.0 142 42.3
BraA09t38666Z Brassica rapa HOM05D004489 ORTHO05D010056 2.0e-17 93.6 116 54.3
C07p01280 Brassica napus HOM05D004489 ORTHO05D098218 2.6e-17 93.2 161 41.6
C05p32350 Brassica napus HOM05D004489 ORTHO05D033093 4.6e-14 82.4 55 80.0
BolC1t03480H Brassica oleracea HOM05D004489 ORTHO05D033093 1.3e-13 80.9 53 83.0
BcaC01g02601 Brassica carinata HOM05D004489 ORTHO05D093224 1.8e-13 80.5 78 64.1
BcaB04g18048 Brassica carinata HOM05D004489 ORTHO05D091089 1.1e-12 77.8 84 54.8
BcaB02g06508 Brassica carinata HOM05D004489 ORTHO05D094292 7.4e-12 75.1 132 40.9
BcaB02g11425 Brassica carinata HOM05D000888 ORTHO05D000740 2.8e-11 73.2 184 39.1
BcaB04g17006 Brassica carinata HOM05D004489 ORTHO05D092589 3.1e-10 69.7 92 53.3
BcaB08g35275 Brassica carinata HOM05D004489 ORTHO05D093088 2.0e-09 67.0 110 44.5
BcaB08g35162 Brassica carinata HOM05D000888 ORTHO05D000740 1.4e-07 60.8 157 36.3
BcaC04g22798 Brassica carinata HOM05D004489 ORTHO05D010056 2.4e-07 60.1 93 46.2
BraA05t21091Z Brassica rapa HOM05D004489 ORTHO05D033093 2.4e-07 60.1 56 67.9
BcaB08g35276 Brassica carinata HOM05D008277 ORTHO05D091063 5.5e-07 58.9 44 61.4
A05p21970 Brassica napus HOM05D010967 ORTHO05D028117 2.7e-06 56.6 132 37.1
BcaB04g17769 Brassica carinata HOM05D004489 ORTHO05D096269 3.5e-06 56.2 55 58.2


User provided reference genes

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