Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g01789 Brassica carinata HOM05D006121 ORTHO05D013509 1.6e-65 252.7 135 100.0
BcaC04g23560 Brassica carinata HOM05D006121 ORTHO05D013509 2.0e-55 219.2 135 87.4
BcaC01g02131 Brassica carinata HOM05D006121 ORTHO05D013509 4.9e-54 214.5 135 87.4
BcaC04g20824 Brassica carinata HOM05D006121 ORTHO05D013509 7.0e-53 210.7 134 84.3
BcaC06g35840 Brassica carinata HOM05D006121 ORTHO05D013509 4.6e-52 208.0 135 81.5
BcaC07g37146 Brassica carinata HOM05D006121 ORTHO05D013509 7.1e-45 184.1 115 87.0
BcaC02g10895 Brassica carinata HOM05D006121 ORTHO05D013509 2.5e-42 175.6 112 85.7
BcaC03g18509 Brassica carinata HOM05D006121 ORTHO05D013509 8.1e-41 170.6 112 80.4
BolC7t41205H Brassica oleracea HOM05D006121 ORTHO05D013509 5.1e-35 151.4 117 69.2
BcaC08g43580 Brassica carinata HOM05D006121 ORTHO05D009559 2.1e-33 146.0 106 74.5
BcaC02g11960 Brassica carinata HOM05D006121 ORTHO05D009559 4.0e-32 141.7 90 81.1
BcaC01g01841 Brassica carinata HOM05D006121 ORTHO05D013509 1.1e-29 133.7 89 82.0
BcaC08g43698 Brassica carinata HOM05D006121 ORTHO05D013509 1.4e-29 133.3 86 82.6
BcaC02g11248 Brassica carinata HOM05D006121 ORTHO05D009559 1.9e-29 132.9 125 61.6
BcaC01g06835 Brassica carinata HOM05D006121 ORTHO05D009559 2.4e-29 132.5 114 66.7
BcaC09g49299 Brassica carinata HOM05D006121 ORTHO05D009559 3.5e-28 128.6 95 75.8
BcaC01g00175 Brassica carinata HOM05D006121 ORTHO05D013509 9.9e-23 110.5 89 71.9
BcaC03g16666 Brassica carinata HOM05D006121 ORTHO05D013509 9.9e-23 110.5 79 73.4
BcaC06g36167 Brassica carinata HOM05D006121 ORTHO05D009559 7.9e-20 100.9 113 55.8
BcaC03g16202 Brassica carinata HOM05D006121 ORTHO05D013509 1.8e-19 99.8 65 80.0
BcaC07g39839 Brassica carinata HOM05D006121 ORTHO05D013509 1.8e-16 89.7 68 67.6
BraA05t21496Z Brassica rapa HOM05D000633 ORTHO05D000477 1.7e-14 83.2 77 57.1
BcaC04g20036 Brassica carinata HOM05D006121 ORTHO05D009559 1.0e-11 73.9 111 41.4
BcaC09g49792 Brassica carinata HOM05D006121 ORTHO05D009559 8.7e-11 70.9 107 40.2
BcaC04g21297 Brassica carinata HOM05D006121 ORTHO05D095629 1.9e-10 69.7 49 71.4
Carub.0001s3399 Capsella rubella HOM05D008386 ORTHO05D010572 1.9e-10 69.7 107 36.4
BcaC01g02164 Brassica carinata HOM05D008386 ORTHO05D010572 4.3e-10 68.6 100 37.0
BcaC04g21234 Brassica carinata HOM05D008386 ORTHO05D010572 4.3e-10 68.6 100 39.0
BcaC02g10683 Brassica carinata HOM05D008386 ORTHO05D010572 5.6e-10 68.2 100 37.0
BcaC09g49551 Brassica carinata HOM05D008386 ORTHO05D010572 1.3e-09 67.0 100 36.0
BcaC01g02130 Brassica carinata HOM05D008386 ORTHO05D010572 2.8e-09 65.9 100 38.0
BcaC08g42828 Brassica carinata HOM05D008386 ORTHO05D010572 2.8e-09 65.9 103 36.9
BcaC02g11959 Brassica carinata HOM05D008386 ORTHO05D010572 3.1e-08 62.4 88 38.6
BolC8t48816H Brassica oleracea HOM05D008386 ORTHO05D010572 4.0e-08 62.0 127 33.1
BcaC02g10386 Brassica carinata HOM05D008386 ORTHO05D010572 5.3e-08 61.6 105 34.3
BcaC04g20778 Brassica carinata HOM05D008386 ORTHO05D010572 5.3e-08 61.6 100 35.0
BcaC02g10719 Brassica carinata HOM05D008386 ORTHO05D010572 9.0e-08 60.8 84 38.1
BolC6t36221H Brassica oleracea HOM05D000313 ORTHO05D000065 1.2e-07 60.5 35 80.0
BolC9t57206H Brassica oleracea HOM05D008386 ORTHO05D010572 1.5e-07 60.1 100 35.0
BolSC21t60224H Brassica oleracea HOM05D006121 ORTHO05D009559 2.0e-07 59.7 110 40.0
BraA06t25240Z Brassica rapa HOM05D006121 ORTHO05D013509 2.6e-07 59.3 67 50.7
BcaC02g10590 Brassica carinata HOM05D008386 ORTHO05D010572 4.5e-07 58.5 100 37.0
CARHR119460 Cardamine hirsuta HOM05D008386 ORTHO05D010572 5.8e-07 58.2 129 31.8
BcaC02g10596 Brassica carinata HOM05D008386 ORTHO05D010572 1.7e-06 56.6 84 39.3
BolC3t19363H Brassica oleracea HOM05D008386 ORTHO05D010572 4.9e-06 55.1 81 34.6
BcaC05g27677 Brassica carinata HOM05D008386 ORTHO05D010572 6.5e-06 54.7 83 37.3


User provided reference genes

Program Settings