Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g01787 Brassica carinata HOM05D004667 ORTHO05D032196 3.4e-65 251.5 127 100.0
C03p71870 Brassica napus HOM05D004667 ORTHO05D032196 4.8e-43 177.9 96 95.8
BolC3t19480H Brassica oleracea HOM05D004667 ORTHO05D032196 1.0e-37 160.2 86 96.5
A06p19950 Brassica napus HOM05D003537 ORTHO05D004180 2.3e-37 159.1 112 76.8
BraA06t25078Z Brassica rapa HOM05D003537 ORTHO05D004180 2.3e-37 159.1 112 76.8
Thhalv10010670m.g Eutrema salsugineum HOM05D004667 ORTHO05D005522 8.1e-35 150.6 104 76.0
Sp5g14280 Schrenkiella parvula HOM05D004667 ORTHO05D005522 5.8e-33 144.4 110 71.8
BolC1t03209H Brassica oleracea HOM05D004667 ORTHO05D005522 8.4e-32 140.6 109 72.5
A01p25820 Brassica napus HOM05D004667 ORTHO05D005522 3.2e-31 138.7 109 70.6
BraA01t02497Z Brassica rapa HOM05D004667 ORTHO05D005522 3.2e-31 138.7 109 70.6
AL5G26930 Arabidopsis lyrata HOM05D004667 ORTHO05D005522 4.2e-31 138.3 111 72.1
BcaB05g23064 Brassica carinata HOM05D004667 ORTHO05D005522 6.0e-30 134.4 109 68.8
Carub.0005s1377 Capsella rubella HOM05D004667 ORTHO05D005522 5.6e-28 127.9 111 66.7
CARHR156320 Cardamine hirsuta HOM05D004667 ORTHO05D005522 4.8e-27 124.8 109 65.1
BcaB02g10693 Brassica carinata HOM05D004667 ORTHO05D005522 1.7e-24 116.3 112 65.2
BcaC09g49811 Brassica carinata HOM05D004667 ORTHO05D005522 1.9e-23 112.8 110 62.7
A06p27240 Brassica napus HOM05D004667 ORTHO05D005522 1.9e-23 112.8 113 64.6
BraA06t25665Z Brassica rapa HOM05D004667 ORTHO05D005522 1.9e-23 112.8 113 64.6
AT3G47640 Arabidopsis thaliana HOM05D004667 ORTHO05D005522 5.5e-23 111.3 109 62.4
C03p67020 Brassica napus HOM05D004667 ORTHO05D005522 3.5e-22 108.6 123 60.2
BcaC01g02286 Brassica carinata HOM05D004667 ORTHO05D005522 1.0e-21 107.1 107 63.6
BolC3t18977H Brassica oleracea HOM05D004667 ORTHO05D005522 1.0e-21 107.1 123 59.3
Aa31LG4G16380 Aethionema arabicum HOM05D004667 ORTHO05D005522 3.2e-15 85.5 107 51.4
THA.LOC104818253 Tarenaya hassleriana HOM05D004667 ORTHO05D005522 3.3e-12 75.5 109 45.9
C03p64530 Brassica napus HOM05D049936 ORTHO05D103910 1.6e-06 56.6 30 83.3
Gohir.D11G033900 Gossypium hirsutum HOM05D004667 ORTHO05D005522 6.1e-06 54.7 119 37.8


User provided reference genes

Program Settings