Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g01632 Brassica carinata HOM05D000667 ORTHO05D003843 2.3e-41 171.8 84 100.0
BcaC01g01636 Brassica carinata HOM05D000667 ORTHO05D003843 8.6e-41 169.9 82 100.0
BolC3t19648H Brassica oleracea HOM05D000667 ORTHO05D003843 1.9e-40 168.7 82 98.8
C03p73540 Brassica napus HOM05D000667 ORTHO05D003843 9.5e-40 166.4 82 98.8
A08p26500 Brassica napus HOM05D000667 ORTHO05D003843 1.0e-25 119.8 81 71.6
BraA08t34602Z Brassica rapa HOM05D000667 ORTHO05D003843 1.0e-25 119.8 81 71.6
BcaB03g12065 Brassica carinata HOM05D000667 ORTHO05D003843 5.8e-21 104.0 75 68.0
C03p73550 Brassica napus HOM05D000667 ORTHO05D003843 1.3e-20 102.8 81 61.7
BcaC01g01631 Brassica carinata HOM05D000667 ORTHO05D003843 8.3e-20 100.1 81 60.5
BolC3t19649H Brassica oleracea HOM05D000667 ORTHO05D003843 8.3e-20 100.1 81 60.5
A08p26490 Brassica napus HOM05D000667 ORTHO05D003843 1.9e-19 99.0 81 60.5
A08p26480 Brassica napus HOM05D000667 ORTHO05D003843 7.1e-19 97.1 73 68.5
AL1G40830 Arabidopsis lyrata HOM05D000667 ORTHO05D003843 9.2e-19 96.7 71 69.0
BraA08t34600Z Brassica rapa HOM05D000667 ORTHO05D003843 1.6e-18 95.9 73 67.1
AT1G27420 Arabidopsis thaliana HOM05D000667 ORTHO05D003843 2.1e-18 95.5 69 69.6
THA.LOC104807603 Tarenaya hassleriana HOM05D000667 ORTHO05D003843 4.6e-18 94.4 69 66.7
C03p73760 Brassica napus HOM05D000667 ORTHO05D003843 6.0e-18 94.0 72 70.8
BolC3t19668H Brassica oleracea HOM05D000667 ORTHO05D003843 6.0e-18 94.0 72 70.8
CARHR027010 Cardamine hirsuta HOM05D000667 ORTHO05D003843 6.0e-18 94.0 69 68.1
Sp1g23650 Schrenkiella parvula HOM05D000667 ORTHO05D003843 6.0e-18 94.0 69 68.1
BcaC01g01630 Brassica carinata HOM05D000667 ORTHO05D003843 7.8e-18 93.6 75 65.3
BcaC01g01634 Brassica carinata HOM05D000667 ORTHO05D003843 7.8e-18 93.6 75 65.3
A08p26300 Brassica napus HOM05D000667 ORTHO05D003843 7.8e-18 93.6 72 69.4
BraA08t34581Z Brassica rapa HOM05D000667 ORTHO05D003843 7.8e-18 93.6 72 69.4
Carub.0001s2596 Capsella rubella HOM05D000667 ORTHO05D003843 7.8e-18 93.6 69 68.1
BolC3t19650H Brassica oleracea HOM05D000667 ORTHO05D003843 1.3e-17 92.8 75 65.3
Thhalv10008094m.g Eutrema salsugineum HOM05D000667 ORTHO05D003843 1.3e-17 92.8 69 68.1
BcaC01g06953 Brassica carinata HOM05D000667 ORTHO05D003843 1.7e-17 92.4 72 69.4
C03p73560 Brassica napus HOM05D000667 ORTHO05D003843 3.0e-17 91.7 74 64.9
BcaC01g01614 Brassica carinata HOM05D000667 ORTHO05D003843 5.1e-17 90.9 72 69.4
BraA07t28968Z Brassica rapa HOM05D001171 ORTHO05D001872 1.2e-13 79.7 69 58.0
A07p11820 Brassica napus HOM05D000667 ORTHO05D003843 2.6e-13 78.6 67 58.2
BcaC06g35289 Brassica carinata HOM05D000667 ORTHO05D003843 3.4e-13 78.2 68 57.4
C07p17770 Brassica napus HOM05D000667 ORTHO05D003843 3.4e-13 78.2 68 57.4
BolC7t42283H Brassica oleracea HOM05D000667 ORTHO05D003843 3.4e-13 78.2 68 57.4
BcaC01g01635 Brassica carinata HOM05D000667 ORTHO05D003843 1.1e-11 73.2 81 49.4
A07p11780 Brassica napus HOM05D000667 ORTHO05D003843 5.1e-09 64.3 67 50.7
BcaC07g39245 Brassica carinata HOM05D000667 ORTHO05D003843 1.1e-08 63.2 67 52.2
C08p22500 Brassica napus HOM05D000667 ORTHO05D003843 1.1e-08 63.2 67 52.2
BolC8t49884H Brassica oleracea HOM05D000667 ORTHO05D003843 1.1e-08 63.2 67 52.2
BraA07t28967Z Brassica rapa HOM05D000667 ORTHO05D003843 1.5e-08 62.8 67 49.3
BcaB03g11976 Brassica carinata HOM05D000667 ORTHO05D003843 9.6e-08 60.1 66 51.5
BcaC07g39248 Brassica carinata HOM05D000667 ORTHO05D003843 1.4e-06 56.2 76 43.4
C07p17750 Brassica napus HOM05D000667 ORTHO05D003843 3.1e-06 55.1 69 46.4
BcaB03g13984 Brassica carinata HOM05D000667 ORTHO05D003843 4.0e-06 54.7 69 50.7
A07p11760 Brassica napus HOM05D000667 ORTHO05D003843 4.0e-06 54.7 69 47.8
A08p27800 Brassica napus HOM05D000667 ORTHO05D003843 4.0e-06 54.7 67 49.3
BraA07t28961Z Brassica rapa HOM05D000667 ORTHO05D003843 4.0e-06 54.7 69 47.8
BcaC06g35292 Brassica carinata HOM05D000667 ORTHO05D003843 5.2e-06 54.3 69 44.9
BolC7t42281H Brassica oleracea HOM05D000667 ORTHO05D003843 5.2e-06 54.3 69 44.9


User provided reference genes

Program Settings