Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g01525 Brassica carinata HOM05D004141 ORTHO05D005416 1.2e-115 419.9 213 100.0
A07p44000 Brassica napus HOM05D004141 ORTHO05D005416 3.0e-82 308.9 173 90.8
BraA07t31908Z Brassica rapa HOM05D004141 ORTHO05D005416 6.7e-82 307.8 173 90.8
BcaC08g47454 Brassica carinata HOM05D004141 ORTHO05D005416 1.1e-81 307.0 173 90.8
C06p52680 Brassica napus HOM05D004141 ORTHO05D005416 1.1e-81 307.0 173 90.8
BolC6t40287H Brassica oleracea HOM05D004141 ORTHO05D005416 1.1e-81 307.0 173 90.8
BcaB03g16036 Brassica carinata HOM05D004141 ORTHO05D005416 4.8e-80 301.6 173 89.0
AT1G78800 Arabidopsis thaliana HOM05D004141 ORTHO05D005416 5.0e-77 291.6 173 86.7
AL2G39200 Arabidopsis lyrata HOM05D004141 ORTHO05D005416 5.5e-76 288.1 173 85.5
Sp5g33830 Schrenkiella parvula HOM05D004141 ORTHO05D005416 7.2e-76 287.7 173 85.5
Carub.0002s2562 Capsella rubella HOM05D004141 ORTHO05D005416 3.5e-75 285.4 173 85.0
Thhalv10007837m.g Eutrema salsugineum HOM05D004141 ORTHO05D005416 1.0e-69 267.3 173 80.3
THA.LOC104812317 Tarenaya hassleriana HOM05D004141 ORTHO05D005416 8.5e-69 264.2 171 79.5
Aa31LG4G2230 Aethionema arabicum HOM05D004141 ORTHO05D005416 1.4e-66 256.9 183 73.2
AUR62037553 Chenopodium quinoa HOM05D004141 ORTHO05D005416 8.2e-64 247.7 173 70.5
Migut.H02002 Erythranthe guttata HOM05D004141 ORTHO05D005416 1.4e-63 246.9 176 71.0
Thecc.07G117900 Theobroma cacao HOM05D004141 ORTHO05D005416 2.4e-63 246.1 181 69.6
CiPaw.11G159700 Carya illinoinensis HOM05D004141 ORTHO05D005416 3.1e-63 245.7 184 67.9
TWI31G0451 Tripterygium wilfordii HOM05D004141 ORTHO05D005416 3.1e-63 245.7 178 70.8
Sopen06g033870 Solanum pennellii HOM05D004141 ORTHO05D005416 4.1e-63 245.4 179 69.3
PGSC0003DMG400030465 Solanum tuberosum HOM05D004141 ORTHO05D005416 4.1e-63 245.4 179 69.3
Actinidia18802 Actinidia chinensis HOM05D004141 ORTHO05D005416 5.3e-63 245.0 180 69.4
AUR62019583 Chenopodium quinoa HOM05D004141 ORTHO05D005416 5.3e-63 245.0 173 69.9
Solyc06g082490.4 Solanum lycopersicum HOM05D004141 ORTHO05D005416 5.3e-63 245.0 179 69.3
Sed0020321 Sechium edule HOM05D004141 ORTHO05D005416 1.2e-62 243.8 178 70.2
Atru.chr3.1550 Acer truncatum HOM05D004141 ORTHO05D005416 2.6e-62 242.7 181 70.2
Dinv15000 Davidia involucrata HOM05D004141 ORTHO05D005416 2.6e-62 242.7 178 69.1
Glyma.12G230400 Glycine max HOM05D004141 ORTHO05D005416 2.6e-62 242.7 182 69.8
Hma1.2p1_1016F.1_g248060 Hydrangea macrophylla HOM05D004141 ORTHO05D005416 2.6e-62 242.7 196 65.8
Ca_10927_v3 Cicer arietinum L. HOM05D004141 ORTHO05D005416 4.5e-62 241.9 177 69.5
FvH4_3g18220 Fragaria vesca HOM05D004141 ORTHO05D005416 1.0e-61 240.7 173 69.9
Lalb_Chr25g0285811 Lupinus albus HOM05D004141 ORTHO05D005416 1.3e-61 240.4 176 69.3
QL06p023676 Quercus lobata HOM05D004141 ORTHO05D005416 1.3e-61 240.4 180 69.4
Cpa.g.sc77.17 Carica papaya HOM05D004141 ORTHO05D005416 1.7e-61 240.0 181 69.6
SGA_v2.0_scaffold130G34289 Striga asiatica HOM05D004141 ORTHO05D005416 1.7e-61 240.0 178 66.9
arahy.Tifrunner.gnm1.ann1.2ZZ8MX Arachis hypogaea HOM05D004141 ORTHO05D005416 2.2e-61 239.6 173 69.9
arahy.Tifrunner.gnm1.ann1.K2RFPE Arachis hypogaea HOM05D004141 ORTHO05D005416 2.2e-61 239.6 173 69.9
SalBow7G1122 Salvia bowleyana HOM05D004141 ORTHO05D005416 2.2e-61 239.6 178 67.4
DCAR_030174 Daucus carota HOM05D004141 ORTHO05D005416 2.9e-61 239.2 178 69.1
Duzib213G0227 Durio zibethinus HOM05D004141 ORTHO05D005416 2.9e-61 239.2 178 68.5
TAR629G0569 Trochodendron aralioides HOM05D004141 ORTHO05D005416 2.9e-61 239.2 178 68.5
EL10Ac4g08353 Beta vulgaris HOM05D004141 ORTHO05D005416 3.8e-61 238.8 173 68.8
Ciclev10020399m.g Citrus clementina HOM05D004141 ORTHO05D005416 3.8e-61 238.8 178 69.1
Prupe.4G241400 Prunus persica HOM05D004141 ORTHO05D005416 3.8e-61 238.8 178 69.7
CSS0023821 Camellia sinensis var. sinensis HOM05D004141 ORTHO05D005416 5.0e-61 238.4 197 62.9
CANSAT78G1263 Cannabis sativa HOM05D004141 ORTHO05D005416 6.5e-61 238.0 181 70.2
COL.COLO4_17535 Corchorus olitorius HOM05D004141 ORTHO05D005416 6.5e-61 238.0 179 67.0
Atru.chr2.2126 Acer truncatum HOM05D004141 ORTHO05D005416 8.5e-61 237.7 181 69.6
Cfa017272 Carpinus fangiana HOM05D004141 ORTHO05D005416 8.5e-61 237.7 182 68.7
Eucgr.F01245 Eucalyptus grandis HOM05D004141 ORTHO05D005416 8.5e-61 237.7 178 69.1
MD11G1264500 Malus domestica HOM05D004141 ORTHO05D005416 8.5e-61 237.7 182 68.7
Prupe.5G052700 Prunus persica HOM05D004141 ORTHO05D005416 8.5e-61 237.7 182 68.7
Lj3g0016162 Lotus japonicus HOM05D004141 ORTHO05D005416 1.1e-60 237.3 177 67.2
unitig_72.g29740 Utricularia gibba HOM05D004141 ORTHO05D005416 1.1e-60 237.3 178 67.4
unitig_746.g26536 Utricularia gibba HOM05D004141 ORTHO05D005416 1.1e-60 237.3 178 67.4
CANSAT78G2476 Cannabis sativa HOM05D004141 ORTHO05D005416 1.4e-60 236.9 181 69.6
Gohir.D01G042710 Gossypium hirsutum HOM05D004141 ORTHO05D005416 1.4e-60 236.9 178 67.4
Gorai.002G054000 Gossypium raimondii HOM05D004141 ORTHO05D005416 1.4e-60 236.9 178 67.4
RcHm_v2.0_Chr5g0030771 Rosa chinensis HOM05D004141 ORTHO05D005416 1.4e-60 236.9 182 67.6
arahy.Tifrunner.gnm1.ann1.9BEE5S Arachis hypogaea HOM05D004141 ORTHO05D005416 1.9e-60 236.5 173 69.4
CsaV3_4G008070 Cucumis sativus L. HOM05D004141 ORTHO05D005416 1.9e-60 236.5 178 68.5
HanXRQChr15g0495231 Helianthus annuus HOM05D004141 ORTHO05D005416 2.5e-60 236.1 173 69.9
Psat6g208960 Pisum sativum HOM05D004141 ORTHO05D005416 2.5e-60 236.1 175 69.1
Ah.16g104680 Amaranthus hybridus HOM05D004141 ORTHO05D005416 3.2e-60 235.7 174 69.5
Duzib213G0637 Durio zibethinus HOM05D004141 ORTHO05D005416 3.2e-60 235.7 178 67.4
Manes.03G100400 Manihot esculenta HOM05D004141 ORTHO05D005416 4.2e-60 235.3 178 68.5
Lj6g0002556 Lotus japonicus HOM05D004141 ORTHO05D005416 5.5e-60 235.0 177 66.7
Potri.011G109000 Populus trichocarpa HOM05D004141 ORTHO05D005416 5.5e-60 235.0 178 68.0
TAR627G0990 Trochodendron aralioides HOM05D004141 ORTHO05D005416 5.5e-60 235.0 181 66.3
Actinidia35211 Actinidia chinensis HOM05D004141 ORTHO05D005416 7.2e-60 234.6 166 72.3
DCAR_013161 Daucus carota HOM05D004141 ORTHO05D005416 7.2e-60 234.6 185 64.3
Phvul.005G081600 Phaseolus vulgaris HOM05D004141 ORTHO05D005416 7.2e-60 234.6 179 67.6
Gohir.A01G053700 Gossypium hirsutum HOM05D004141 ORTHO05D005416 9.4e-60 234.2 178 66.3
Sc03g0010560 Simmondsia chinensis HOM05D004141 ORTHO05D005416 1.6e-59 233.4 178 69.1
ECA240G0250 Erigeron canadensis HOM05D004141 ORTHO05D005416 2.1e-59 233.0 173 68.2
MSTRG.11343 Avicennia marina HOM05D004141 ORTHO05D005416 2.7e-59 232.6 194 61.9
CsaV3_7G010060 Cucumis sativus L. HOM05D004141 ORTHO05D005416 2.7e-59 232.6 178 68.0
Zm00001eb072460 Zea mays HOM05D004141 ORTHO05D005416 2.7e-59 232.6 177 67.8
FAN21G2932 Fragaria x ananassa HOM05D004141 ORTHO05D005416 3.6e-59 232.3 219 58.4
HanXRQChr04g0118321 Helianthus annuus HOM05D004141 ORTHO05D005416 3.6e-59 232.3 173 68.2
Oeu061361.2 Olea europaea HOM05D004141 ORTHO05D005416 3.6e-59 232.3 178 65.7
FAN16G3678 Fragaria x ananassa HOM05D004141 ORTHO05D005416 4.7e-59 231.9 182 65.9
Oeu031026.1 Olea europaea HOM05D004141 ORTHO05D005416 4.7e-59 231.9 173 65.9
PSO017G5924 Papaver somniferum HOM05D004141 ORTHO05D005416 7.9e-59 231.1 177 68.9
ECA232G4285 Erigeron canadensis HOM05D004141 ORTHO05D005416 1.0e-58 230.7 173 68.2
FAN11G2786 Fragaria x ananassa HOM05D004141 ORTHO05D005416 1.0e-58 230.7 192 63.5
MBI14_g32936_MAGBIO Magnolia biondii HOM05D004141 ORTHO05D005416 1.0e-58 230.7 181 67.4
HPP92_017867 Vanilla planifolia HOM05D004141 ORTHO05D005416 1.4e-58 230.3 189 65.6
VMungo1080G0359 Vigna mungo HOM05D004141 ORTHO05D005416 1.4e-58 230.3 177 66.7
Cc05_g11010 Coffea canephora HOM05D004141 ORTHO05D005416 1.8e-58 229.9 174 65.5
Medtr1g104880 Medicago truncatula HOM05D004141 ORTHO05D005416 1.8e-58 229.9 175 67.4
PSO170G2286 Papaver somniferum HOM05D004141 ORTHO05D005416 1.8e-58 229.9 177 68.9
PGR004G1319 Punica granatum HOM05D004141 ORTHO05D005416 2.3e-58 229.6 177 66.7
PGR117G0003 Punica granatum HOM05D004141 ORTHO05D005416 2.3e-58 229.6 177 66.7
Glyma.13G269200 Glycine max HOM05D004141 ORTHO05D005416 3.0e-58 229.2 201 62.2
vmacro09491 Vaccinium macrocarpon HOM05D004141 ORTHO05D005416 3.0e-58 229.2 173 68.2
Nn7g36869 Nelumbo nucifera HOM05D004141 ORTHO05D005416 3.9e-58 228.8 179 67.0
Peaxi162Scf00111g01467 Petunia axillaris HOM05D004141 ORTHO05D005416 3.9e-58 228.8 178 65.2
GSVIVG01014186001 Vitis vinifera HOM05D004141 ORTHO05D005416 3.9e-58 228.8 176 67.0
Aqoxy1G02012 Aquilegia oxysepala HOM05D004141 ORTHO05D005416 5.1e-58 228.4 178 69.1
Lj1C587G1 Lonicera japonica HOM05D004141 ORTHO05D005416 8.8e-58 227.6 173 68.2
Os04g0589600 Oryza sativa ssp. japonica HOM05D004141 ORTHO05D005416 1.1e-57 227.3 177 66.7
Peaxi162Scf00390g00331 Petunia axillaris HOM05D004141 ORTHO05D005416 1.5e-57 226.9 173 67.6
MELO3C016129.2 Cucumis melo HOM05D004141 ORTHO05D005416 2.6e-57 226.1 192 63.5
Thhalv10019736m.g Eutrema salsugineum HOM05D004141 ORTHO05D005416 4.4e-57 225.3 156 75.0
vmacro11945 Vaccinium macrocarpon HOM05D004141 ORTHO05D005416 5.7e-57 224.9 190 61.1
Nitab4.5_0000383g0110 Nicotiana tabacum HOM05D004141 ORTHO05D005416 9.7e-57 224.2 173 65.9
Rhsim02G0051200 Rhododendron simsii HOM05D004141 ORTHO05D005416 1.3e-56 223.8 208 58.2
Rhsim04G0026700 Rhododendron simsii HOM05D004141 ORTHO05D005416 1.7e-56 223.4 218 56.9
Sabra11G0096600 Salix brachista HOM05D004141 ORTHO05D005416 3.7e-56 222.2 208 59.1
ATR0807G029 Amborella trichopoda HOM05D004141 ORTHO05D005416 4.1e-55 218.8 180 65.0
Sed0017698 Sechium edule HOM05D004141 ORTHO05D005416 7.0e-55 218.0 211 56.4
Haze_09318 Corylus avellana HOM05D004141 ORTHO05D005416 1.6e-54 216.9 208 58.7
CDE06G2415 Ceratophyllum demersum HOM05D004141 ORTHO05D005416 4.5e-54 215.3 155 69.0
arahy.Tifrunner.gnm1.ann1.DJ268J Arachis hypogaea HOM05D004141 ORTHO05D005416 1.0e-53 214.2 219 53.9
Hund09287 Selenicereus undatus HOM05D004141 ORTHO05D005416 1.6e-51 206.8 173 62.4
SEGI_24046 Sequoiadendron giganteum HOM05D004141 ORTHO05D005416 1.6e-51 206.8 179 59.8
CAN.G4738.1 Capsicum annuum HOM05D004141 ORTHO05D005416 3.6e-51 205.7 141 71.6
Lsat_1_v5_gn_7_102521 Lactuca sativa HOM05D004141 ORTHO05D005416 4.7e-51 205.3 173 62.4
MD00G1077900 Malus domestica HOM05D004141 ORTHO05D005416 4.0e-50 202.2 185 61.1
Lalb_Chr01g0016531 Lupinus albus HOM05D004141 ORTHO05D005416 1.1e-49 200.7 130 73.8
Pp3c12_4340 Physcomitrium patens HOM05D004141 ORTHO05D005416 2.6e-49 199.5 177 57.6
ClCG07G010270 Citrullus lanatus HOM05D004141 ORTHO05D005416 7.5e-49 198.0 173 61.3
FAN25G0103 Fragaria x ananassa HOM05D004141 ORTHO05D005416 1.1e-47 194.1 137 69.3
AagrBONN_evm.TU.Sc2ySwM_117.897 Anthoceros agrestis HOM05D004141 ORTHO05D005416 9.1e-47 191.0 197 51.8
Nitab4.5_0002851g0030 Nicotiana tabacum HOM05D004141 ORTHO05D005416 2.0e-46 189.9 181 56.4
SMO200G0224 Selaginella moellendorffii HOM05D004141 ORTHO05D005416 3.8e-45 185.7 170 56.5
Mapoly0001s0113 Marchantia polymorpha HOM05D004141 ORTHO05D005416 3.2e-44 182.6 180 55.0
Rhsim06G0208700 Rhododendron simsii HOM05D004141 ORTHO05D005416 3.2e-44 182.6 161 59.6
SHI08479 Sapria himalayana HOM05D004141 ORTHO05D000023 1.6e-43 180.3 179 54.7
Dinv18368 Davidia involucrata HOM05D004141 ORTHO05D005416 4.0e-42 175.6 181 54.7
MCO01G083 Micromonas commoda HOM05D004141 ORTHO05D005416 8.8e-42 174.5 171 55.0
CSS0043357 Camellia sinensis var. sinensis HOM05D004141 ORTHO05D005416 2.8e-40 169.5 175 53.7
CSS0028209 Camellia sinensis var. sinensis HOM05D004141 ORTHO05D005416 6.3e-40 168.3 175 53.1
PRCOL_00006028 Prasinoderma coloniale HOM05D004141 ORTHO05D005416 1.4e-39 167.2 170 53.5
Potri.001G393000 Populus trichocarpa HOM05D004141 ORTHO05D005416 5.4e-39 165.2 154 59.1
Ciclev10022599m.g Citrus clementina HOM05D004141 ORTHO05D005416 2.5e-36 156.4 98 75.5
Haze_26741 Corylus avellana HOM05D004141 ORTHO05D005416 1.5e-33 147.1 145 51.0
CBR_g988 Chara braunii HOM05D004141 ORTHO05D005416 1.0e-29 134.4 114 56.1
Cre02.g095147 Chlamydomonas reinhardtii HOM05D004141 ORTHO05D005416 2.3e-29 133.3 169 46.2
Ciclev10022380m.g Citrus clementina HOM05D004141 ORTHO05D005416 1.9e-28 130.2 177 44.1
Rhsim08G0243200 Rhododendron simsii HOM05D004141 ORTHO05D005416 2.1e-27 126.7 198 40.4
BcaB05g25154 Brassica carinata HOM05D004141 ORTHO05D005416 7.8e-22 108.2 63 84.1
Rhsim12G0175600 Rhododendron simsii HOM05D004141 ORTHO05D005416 2.1e-19 100.1 168 39.9
C02p35890 Brassica napus HOM05D004141 ORTHO05D005416 3.6e-19 99.4 53 84.9
BcaC01g01526 Brassica carinata HOM05D004141 ORTHO05D005416 5.2e-18 95.5 50 90.0
Cfa025499 Carpinus fangiana HOM05D004141 ORTHO05D005416 5.2e-18 95.5 151 41.7
BcaC01g01527 Brassica carinata HOM05D004141 ORTHO05D009181 2.9e-16 89.7 64 79.7
Rhsim02G0051400 Rhododendron simsii HOM05D004141 ORTHO05D000437 3.7e-16 89.4 62 66.1
BcaC03g15838 Brassica carinata HOM05D004141 ORTHO05D005416 4.3e-12 75.9 40 85.0
Nitab4.5_0010088g0010 Nicotiana tabacum HOM05D004141 ORTHO05D005416 7.3e-12 75.1 38 89.5
A02p22350 Brassica napus HOM05D004141 ORTHO05D026982 8.9e-10 68.2 46 78.3
Pp3c14_26870 Physcomitrium patens HOM05D004762 ORTHO05D005972 2.4e-07 60.1 165 29.1
PRCOL_00001337 Prasinoderma coloniale HOM05D003378 ORTHO05D003942 4.1e-07 59.3 121 33.1
Haze_26859 Corylus avellana HOM05D004762 ORTHO05D005972 4.6e-06 55.8 161 29.2


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