Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g01471 Brassica carinata HOM05D025996 ORTHO05D024015 9.1e-34 146.4 75 100.0
BcaB04g16986 Brassica carinata HOM05D000490 ORTHO05D000785 1.4e-18 95.9 190 38.4
BolC3t21546H Brassica oleracea HOM05D000490 ORTHO05D000785 5.9e-17 90.5 190 37.4
A06p00350 Brassica napus HOM05D000490 ORTHO05D000785 9.4e-15 83.2 187 34.8
BraA06t23250Z Brassica rapa HOM05D000490 ORTHO05D000785 9.4e-15 83.2 187 34.8
A08p00880 Brassica napus HOM05D000490 ORTHO05D024015 1.2e-14 82.8 44 100.0
C03p92360 Brassica napus HOM05D025996 ORTHO05D024015 2.7e-14 81.6 75 62.7
C06p10150 Brassica napus HOM05D000490 ORTHO05D000785 2.7e-14 81.6 187 34.2
BolC3t21544H Brassica oleracea HOM05D025996 ORTHO05D024015 8.0e-14 80.1 75 61.3
Thhalv10011807m.g Eutrema salsugineum HOM05D000490 ORTHO05D000785 1.4e-13 79.3 190 33.2
AT1G55190 Arabidopsis thaliana HOM05D000490 ORTHO05D000785 3.0e-13 78.2 190 33.2
C03p92310 Brassica napus HOM05D025996 ORTHO05D024015 5.2e-13 77.4 42 97.6
AL1G63230 Arabidopsis lyrata HOM05D000490 ORTHO05D000785 6.8e-13 77.0 190 33.2
BcaB02g10840 Brassica carinata HOM05D000490 ORTHO05D000785 1.5e-12 75.9 190 31.1
Carub.0001s4369 Capsella rubella HOM05D000490 ORTHO05D000785 2.6e-12 75.1 190 32.1
CARHR044820 Cardamine hirsuta HOM05D000490 ORTHO05D000785 2.6e-12 75.1 190 31.6
Sp1g40870 Schrenkiella parvula HOM05D000490 ORTHO05D000785 3.4e-12 74.7 190 32.6
C06p15830 Brassica napus HOM05D000490 ORTHO05D000785 4.4e-12 74.3 190 30.0
BcaC08g44179 Brassica carinata HOM05D000490 ORTHO05D000785 5.7e-12 73.9 190 30.0
A05p17640 Brassica napus HOM05D000490 ORTHO05D000785 5.7e-12 73.9 190 30.5
BolC6t36775H Brassica oleracea HOM05D000490 ORTHO05D000785 5.7e-12 73.9 190 30.0
BraA05t20655Z Brassica rapa HOM05D000490 ORTHO05D000785 5.7e-12 73.9 190 30.5
BolC6t36089H Brassica oleracea HOM05D000490 ORTHO05D000785 9.7e-12 73.2 184 32.6
Aa31LG10G1000 Aethionema arabicum HOM05D000490 ORTHO05D000785 1.3e-08 62.8 188 28.7
THA.LOC109116566 Tarenaya hassleriana HOM05D000490 ORTHO05D000785 1.1e-07 59.7 44 65.9
Carub.0003s1324 Capsella rubella HOM05D000490 ORTHO05D000785 1.9e-07 58.9 44 70.5
AL3G25760 Arabidopsis lyrata HOM05D000490 ORTHO05D000785 9.4e-07 56.6 190 27.9
CARHR088450 Cardamine hirsuta HOM05D000490 ORTHO05D000785 9.4e-07 56.6 44 68.2
AT3G13720 Arabidopsis thaliana HOM05D000490 ORTHO05D000785 2.7e-06 55.1 44 63.6
Thhalv10021584m.g Eutrema salsugineum HOM05D000490 ORTHO05D000785 2.7e-06 55.1 44 65.9
SGA_v2.0_scaffold45G16979 Striga asiatica HOM05D000490 ORTHO05D000785 4.7e-06 54.3 33 78.8
Sp3g11920 Schrenkiella parvula HOM05D000490 ORTHO05D000785 8.0e-06 53.5 32 75.0


User provided reference genes

Program Settings