Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g01448 Brassica carinata HOM05D009071 ORTHO05D011247 5.2e-53 211.5 170 100.0
C03p92110 Brassica napus HOM05D009071 ORTHO05D011247 5.0e-48 194.9 164 97.0
A08p01090 Brassica napus HOM05D009071 ORTHO05D011247 1.1e-39 167.2 170 90.6
BraA08t32165Z Brassica rapa HOM05D009071 ORTHO05D011247 1.1e-39 167.2 170 90.6
BcaB04g17014 Brassica carinata HOM05D009071 ORTHO05D011247 2.7e-25 119.4 182 74.2
BcaC01g01447 Brassica carinata HOM05D009071 ORTHO05D011247 3.9e-24 115.5 90 80.0
C06p10000 Brassica napus HOM05D009071 ORTHO05D011247 8.9e-21 104.4 159 57.2
BolC6t36073H Brassica oleracea HOM05D009071 ORTHO05D011247 8.9e-21 104.4 159 57.2
BcaC08g43602 Brassica carinata HOM05D009071 ORTHO05D011247 4.9e-19 98.6 159 64.8
BcaC01g01446 Brassica carinata HOM05D009071 ORTHO05D011247 2.4e-18 96.3 85 76.5
A06p00440 Brassica napus HOM05D009071 ORTHO05D011247 7.8e-17 91.3 157 55.4
BraA06t23258Z Brassica rapa HOM05D009071 ORTHO05D011247 7.8e-17 91.3 157 55.4
Thhalv10012303m.g Eutrema salsugineum HOM05D009071 ORTHO05D011247 2.2e-11 73.2 169 65.7
Carub.0001s4345 Capsella rubella HOM05D009071 ORTHO05D011247 1.9e-10 70.1 60 65.0
AT1G54215 Arabidopsis thaliana HOM05D009071 ORTHO05D011247 7.1e-10 68.2 55 67.3
AL1G62930 Arabidopsis lyrata HOM05D009071 ORTHO05D011247 1.0e-08 64.3 45 77.8
A03p38590 Brassica napus HOM05D009071 ORTHO05D011247 7.4e-07 58.2 45 64.4
BcaC01g03961 Brassica carinata HOM05D009071 ORTHO05D011247 2.8e-06 56.2 42 66.7
C03p46700 Brassica napus HOM05D009071 ORTHO05D011247 2.8e-06 56.2 42 66.7
BolC3t16935H Brassica oleracea HOM05D009071 ORTHO05D011247 2.8e-06 56.2 42 66.7
BraA03t13006Z Brassica rapa HOM05D009071 ORTHO05D011247 2.8e-06 56.2 42 66.7
AL3G26160 Arabidopsis lyrata HOM05D009071 ORTHO05D011247 6.2e-06 55.1 45 62.2
BcaB06g25415 Brassica carinata HOM05D009071 ORTHO05D011247 6.2e-06 55.1 41 68.3
THA.LOC104810363 Tarenaya hassleriana HOM05D009071 ORTHO05D011247 6.2e-06 55.1 46 63.0


User provided reference genes

Program Settings