Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g01423 Brassica carinata HOM05D003839 ORTHO05D003352 1.0e-47 193.0 92 100.0
C03p91870 Brassica napus HOM05D003839 ORTHO05D003352 1.0e-47 193.0 92 100.0
BolC3t21507H Brassica oleracea HOM05D003839 ORTHO05D003352 1.0e-47 193.0 92 100.0
C04p33340 Brassica napus HOM05D003839 ORTHO05D003352 1.5e-46 189.1 91 96.7
C06p50270 Brassica napus HOM05D003839 ORTHO05D003352 1.5e-46 189.1 91 96.7
BraA09t40513Z Brassica rapa HOM05D003839 ORTHO05D003352 5.2e-23 110.9 88 56.8
Thhalv10002269m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 2.6e-22 108.6 91 54.9
Thhalv10005434m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 5.7e-22 107.5 91 52.7
A09p19700 Brassica napus HOM05D003839 ORTHO05D003352 1.1e-20 103.2 86 51.2
A09p20270 Brassica napus HOM05D003839 ORTHO05D003352 5.4e-20 100.9 86 50.0
Thhalv10003388m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 5.4e-20 100.9 89 53.9
A03p67960 Brassica napus HOM05D003839 ORTHO05D003352 7.0e-20 100.5 86 51.2
BraA07t28801Z Brassica rapa HOM05D003839 ORTHO05D003352 2.0e-19 99.0 86 48.8
Thhalv10005441m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 2.7e-19 98.6 91 47.3
BcaC01g02162 Brassica carinata HOM05D003839 ORTHO05D003352 5.9e-19 97.4 91 44.0
BcaC04g22280 Brassica carinata HOM05D003839 ORTHO05D003352 7.7e-19 97.1 86 48.8
A03p53810 Brassica napus HOM05D000357 ORTHO05D000242 7.7e-19 97.1 91 49.5
C09p21410 Brassica napus HOM05D003839 ORTHO05D003352 7.7e-19 97.1 86 48.8
Thhalv10002917m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 3.8e-18 94.7 93 45.2
BcaB08g35221 Brassica carinata HOM05D003839 ORTHO05D003352 5.0e-18 94.4 86 48.8
C03p67990 Brassica napus HOM05D003839 ORTHO05D003352 1.1e-17 93.2 83 45.8
BraA02t07279Z Brassica rapa HOM05D003839 ORTHO05D003352 4.2e-17 91.3 71 52.1
C06p24070 Brassica napus HOM05D018430 ORTHO05D020143 1.6e-16 89.4 71 54.9
BolC6t35618H Brassica oleracea HOM05D003839 ORTHO05D003352 2.1e-16 89.0 91 41.8
BraA08t34532Z Brassica rapa HOM05D003839 ORTHO05D003352 3.6e-16 88.2 91 41.8
BolC9t55033H Brassica oleracea HOM05D003839 ORTHO05D003352 6.1e-16 87.4 91 45.1
BcaC03g15389 Brassica carinata HOM05D003839 ORTHO05D003352 8.0e-16 87.0 89 40.4
BcaC03g16634 Brassica carinata HOM05D003839 ORTHO05D003352 8.0e-16 87.0 89 40.4
BolC7t43565H Brassica oleracea HOM05D003839 ORTHO05D003352 8.0e-16 87.0 89 40.4
Thhalv10003316m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 8.0e-16 87.0 68 57.4
C02p24590 Brassica napus HOM05D003839 ORTHO05D003352 1.0e-15 86.7 91 36.3
BolC2t10492H Brassica oleracea HOM05D003839 ORTHO05D003352 1.0e-15 86.7 91 40.7
C02p44490 Brassica napus HOM05D003839 ORTHO05D003352 1.4e-15 86.3 91 40.7
BcaB07g31374 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-14 82.8 85 41.2
AL8G28420 Arabidopsis lyrata HOM05D003839 ORTHO05D003352 3.4e-14 81.6 91 42.9
AL4G17890 Arabidopsis lyrata HOM05D003839 ORTHO05D003352 5.7e-14 80.9 91 42.9
BcaNung02469 Brassica carinata HOM05D003839 ORTHO05D003352 5.7e-14 80.9 83 41.0
A01p36380 Brassica napus HOM05D003839 ORTHO05D003352 5.7e-14 80.9 85 43.5
C07p40670 Brassica napus HOM05D003839 ORTHO05D003352 5.7e-14 80.9 83 41.0
BcaB06g26804 Brassica carinata HOM05D003839 ORTHO05D003352 7.5e-14 80.5 91 40.7
BcaC06g33695 Brassica carinata HOM05D003839 ORTHO05D003352 7.5e-14 80.5 91 39.6
A05p03580 Brassica napus HOM05D003839 ORTHO05D003352 7.5e-14 80.5 91 38.5
C02p27640 Brassica napus HOM05D003839 ORTHO05D003352 7.5e-14 80.5 91 39.6
BraA02t07568Z Brassica rapa HOM05D008292 ORTHO05D003352 7.5e-14 80.5 91 38.5
BcaC08g44791 Brassica carinata HOM05D003839 ORTHO05D003352 1.3e-13 79.7 71 49.3
A02p28670 Brassica napus HOM05D003839 ORTHO05D003352 1.3e-13 79.7 91 39.6
BolC4t27974H Brassica oleracea HOM05D003839 ORTHO05D003352 1.3e-13 79.7 70 52.9
BraA02t07902Z Brassica rapa HOM05D003839 ORTHO05D003352 1.3e-13 79.7 91 39.6
BolC3t19025H Brassica oleracea HOM05D003839 ORTHO05D003352 1.7e-13 79.3 70 45.7
BcaC03g17189 Brassica carinata HOM05D003839 ORTHO05D003352 2.8e-13 78.6 91 37.4
BolC6t35914H Brassica oleracea HOM05D003839 ORTHO05D003352 2.8e-13 78.6 71 53.5
BolC5t34007H Brassica oleracea HOM05D003839 ORTHO05D003352 6.3e-13 77.4 91 38.5
BcaC05g29109 Brassica carinata HOM05D003839 ORTHO05D003352 8.3e-13 77.0 91 38.5
C03p63060 Brassica napus HOM05D003839 ORTHO05D003352 8.3e-13 77.0 91 37.4
C05p53370 Brassica napus HOM05D003839 ORTHO05D003352 8.3e-13 77.0 91 38.5
C08p08700 Brassica napus HOM05D000096 ORTHO05D000045 8.3e-13 77.0 85 40.0
BolC8t48491H Brassica oleracea HOM05D003839 ORTHO05D003352 8.3e-13 77.0 91 38.5
BcaC05g27601 Brassica carinata HOM05D003839 ORTHO05D003352 1.1e-12 76.6 91 38.5
C05p35870 Brassica napus HOM05D003839 ORTHO05D003352 1.1e-12 76.6 91 38.5
BcaC08g44872 Brassica carinata HOM05D003839 ORTHO05D003352 1.4e-12 76.3 71 45.1
C07p08430 Brassica napus HOM05D008292 ORTHO05D003352 1.4e-12 76.3 89 39.3
C09p23320 Brassica napus HOM05D003839 ORTHO05D003352 1.4e-12 76.3 78 42.3
BolC5t32306H Brassica oleracea HOM05D003839 ORTHO05D003352 1.4e-12 76.3 91 38.5
BcaB01g02875 Brassica carinata HOM05D003839 ORTHO05D003352 1.8e-12 75.9 91 36.3
BcaB06g26117 Brassica carinata HOM05D003839 ORTHO05D003352 1.8e-12 75.9 72 41.7
A05p21770 Brassica napus HOM05D003839 ORTHO05D003352 2.4e-12 75.5 91 37.4
C03p32250 Brassica napus HOM05D008292 ORTHO05D003352 2.4e-12 75.5 89 39.3
BraA05t21098Z Brassica rapa HOM05D003839 ORTHO05D003352 2.4e-12 75.5 91 37.4
BcaNung06308 Brassica carinata HOM05D008292 ORTHO05D003352 3.1e-12 75.1 89 39.3
A03p53820 Brassica napus HOM05D000943 ORTHO05D002475 3.1e-12 75.1 83 39.8
BraA01t02749Z Brassica rapa HOM05D003839 ORTHO05D003352 3.1e-12 75.1 91 35.2
CARHR101890 Cardamine hirsuta HOM05D008292 ORTHO05D003352 3.1e-12 75.1 91 37.4
BcaB06g27258 Brassica carinata HOM05D003839 ORTHO05D003352 4.1e-12 74.7 91 35.2
Thhalv10002164m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 4.1e-12 74.7 91 39.6
AT2G35280 Arabidopsis thaliana HOM05D008292 ORTHO05D003352 5.4e-12 74.3 91 37.4
BcaB01g01663 Brassica carinata HOM05D003839 ORTHO05D003352 5.4e-12 74.3 82 37.8
BcaC09g50233 Brassica carinata HOM05D003839 ORTHO05D003352 5.4e-12 74.3 68 45.6
A05p21290 Brassica napus HOM05D003839 ORTHO05D003352 5.4e-12 74.3 91 37.4
BraA05t21037Z Brassica rapa HOM05D003839 ORTHO05D003352 5.4e-12 74.3 91 37.4
BcaB02g06630 Brassica carinata HOM05D003839 ORTHO05D003352 7.0e-12 73.9 83 36.1
BcaC06g36055 Brassica carinata HOM05D008292 ORTHO05D003352 7.0e-12 73.9 89 38.2
BolC3t15567H Brassica oleracea HOM05D008292 ORTHO05D003352 7.0e-12 73.9 89 38.2
C05p53340 Brassica napus HOM05D003839 ORTHO05D003352 9.2e-12 73.6 91 37.4
BraA01t02837Z Brassica rapa HOM05D003839 ORTHO05D003352 9.2e-12 73.6 91 36.3
C03p63070 Brassica napus HOM05D003839 ORTHO05D003352 1.2e-11 73.2 78 41.0
BraA01t03014Z Brassica rapa HOM05D003839 ORTHO05D003352 1.2e-11 73.2 91 35.2
A06p31440 Brassica napus HOM05D008292 ORTHO05D003352 1.6e-11 72.8 73 39.7
A09p40840 Brassica napus HOM05D008292 ORTHO05D003352 1.6e-11 72.8 73 39.7
C04p41030 Brassica napus HOM05D003839 ORTHO05D003352 1.6e-11 72.8 91 33.0
BolC4t25686H Brassica oleracea HOM05D003839 ORTHO05D003352 1.6e-11 72.8 91 33.0
BcaB03g16839 Brassica carinata HOM05D003839 ORTHO05D003352 2.0e-11 72.4 91 35.2
BolC3t20345H Brassica oleracea HOM05D003839 ORTHO05D003352 2.0e-11 72.4 71 40.8
BcaB01g00999 Brassica carinata HOM05D008292 ORTHO05D003352 2.7e-11 72.0 89 39.3
A05p17610 Brassica napus HOM05D003839 ORTHO05D003352 2.7e-11 72.0 91 35.2
C05p17950 Brassica napus HOM05D003839 ORTHO05D003352 2.7e-11 72.0 83 37.3
BolC6t38134H Brassica oleracea HOM05D003839 ORTHO05D003352 3.5e-11 71.6 91 34.1
BcaC03g17190 Brassica carinata HOM05D003839 ORTHO05D003352 4.5e-11 71.2 90 35.6
A01p17040 Brassica napus HOM05D008292 ORTHO05D003352 4.5e-11 71.2 89 40.4
C05p33380 Brassica napus HOM05D000313 ORTHO05D000065 4.5e-11 71.2 83 38.6
BolC5t32063H Brassica oleracea HOM05D000313 ORTHO05D000065 4.5e-11 71.2 83 38.6
BraA09t39508Z Brassica rapa HOM05D008292 ORTHO05D003352 4.5e-11 71.2 89 40.4
C04p25750 Brassica napus HOM05D003839 ORTHO05D003352 5.9e-11 70.9 83 38.6
BcaB05g23505 Brassica carinata HOM05D003839 ORTHO05D003352 7.8e-11 70.5 91 31.9
BcaB07g32949 Brassica carinata HOM05D003839 ORTHO05D003352 7.8e-11 70.5 91 33.0
BolC4t24234H Brassica oleracea HOM05D003839 ORTHO05D003352 7.8e-11 70.5 83 38.6
BcaB04g18348 Brassica carinata HOM05D003839 ORTHO05D003352 1.0e-10 70.1 82 36.6
C09p33270 Brassica napus HOM05D008292 ORTHO05D003352 1.7e-10 69.3 89 38.2
BolC6t39088H Brassica oleracea HOM05D008292 ORTHO05D003352 1.7e-10 69.3 80 38.8
BolC9t56163H Brassica oleracea HOM05D008292 ORTHO05D003352 1.7e-10 69.3 89 38.2
BcaB07g32609 Brassica carinata HOM05D003839 ORTHO05D003352 2.3e-10 68.9 91 34.1
BcaC01g04545 Brassica carinata HOM05D000313 ORTHO05D000065 2.9e-10 68.6 61 42.6
BcaC03g15184 Brassica carinata HOM05D003839 ORTHO05D003352 3.8e-10 68.2 91 35.2
A05p32880 Brassica napus HOM05D008292 ORTHO05D003352 3.8e-10 68.2 89 34.8
BraA05t22695Z Brassica rapa HOM05D008292 ORTHO05D003352 3.8e-10 68.2 89 34.8
BcaB06g26196 Brassica carinata HOM05D003839 ORTHO05D003352 5.0e-10 67.8 82 35.4
C05p11490 Brassica napus HOM05D010997 ORTHO05D014498 5.0e-10 67.8 71 43.7
BcaB05g23330 Brassica carinata HOM05D003839 ORTHO05D003352 6.6e-10 67.4 86 37.2
BcaC03g15793 Brassica carinata HOM05D008292 ORTHO05D003352 8.6e-10 67.0 89 34.8
BraA09t36993Z Brassica rapa HOM05D010997 ORTHO05D014498 1.1e-09 66.6 71 43.7
BcaB02g07569 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-09 66.2 78 35.9
BcaB05g24307 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-09 66.2 91 29.7
BcaC07g37053 Brassica carinata HOM05D008292 ORTHO05D003352 1.5e-09 66.2 89 33.7
BcaC07g37399 Brassica carinata HOM05D008292 ORTHO05D003352 1.5e-09 66.2 88 34.1
C03p19740 Brassica napus HOM05D008292 ORTHO05D003352 1.5e-09 66.2 89 34.8
C08p34220 Brassica napus HOM05D003839 ORTHO05D003352 1.5e-09 66.2 71 38.0
BolC8t51019H Brassica oleracea HOM05D003839 ORTHO05D003352 1.5e-09 66.2 71 38.0
BcaC03g15888 Brassica carinata HOM05D008292 ORTHO05D003352 1.9e-09 65.9 83 39.8
C07p23690 Brassica napus HOM05D010997 ORTHO05D014498 1.9e-09 65.9 71 42.3
BcaB04g17572 Brassica carinata HOM05D003839 ORTHO05D003352 2.5e-09 65.5 91 33.0
C02p23500 Brassica napus HOM05D010997 ORTHO05D014498 2.5e-09 65.5 71 42.3
C08p36920 Brassica napus HOM05D008292 ORTHO05D003352 2.5e-09 65.5 89 33.7
BolC4t27064H Brassica oleracea HOM05D008292 ORTHO05D003352 2.5e-09 65.5 85 35.3
BcaB07g32710 Brassica carinata HOM05D003839 ORTHO05D003352 3.3e-09 65.1 91 33.0
BolC8t47715H Brassica oleracea HOM05D008292 ORTHO05D003352 3.3e-09 65.1 72 36.1
C07p29940 Brassica napus HOM05D003839 ORTHO05D003352 4.3e-09 64.7 71 38.0
BcaB01g00721 Brassica carinata HOM05D003839 ORTHO05D003352 7.3e-09 63.9 91 30.8
BcaC02g08358 Brassica carinata HOM05D008292 ORTHO05D003352 7.3e-09 63.9 82 35.4
BcaC03g17703 Brassica carinata HOM05D008292 ORTHO05D003352 7.3e-09 63.9 73 38.4
BolC2t11778H Brassica oleracea HOM05D008292 ORTHO05D003352 7.3e-09 63.9 73 38.4
C03p57520 Brassica napus HOM05D014297 ORTHO05D019911 1.2e-08 63.2 86 32.6
BcaB01g00514 Brassica carinata HOM05D003839 ORTHO05D003352 1.6e-08 62.8 78 33.3
BcaB04g16904 Brassica carinata HOM05D008292 ORTHO05D003352 1.6e-08 62.8 73 43.8
BraA08t34531Z Brassica rapa HOM05D008292 ORTHO05D003352 2.1e-08 62.4 73 37.0
BcaB04g17113 Brassica carinata HOM05D003839 ORTHO05D003352 2.8e-08 62.0 91 30.8
A09p52190 Brassica napus HOM05D010997 ORTHO05D014498 2.8e-08 62.0 71 40.8
C08p08050 Brassica napus HOM05D003839 ORTHO05D003352 2.8e-08 62.0 62 40.3
BolC2t12326H Brassica oleracea HOM05D008292 ORTHO05D003352 2.8e-08 62.0 73 37.0
BcaB01g01517 Brassica carinata HOM05D003839 ORTHO05D003352 4.7e-08 61.2 91 31.9
BcaC02g10611 Brassica carinata HOM05D003839 ORTHO05D003352 4.7e-08 61.2 74 39.2
BcaB03g16489 Brassica carinata HOM05D003839 ORTHO05D003352 6.1e-08 60.8 78 34.6
A04p07260 Brassica napus HOM05D003839 ORTHO05D003352 6.1e-08 60.8 82 34.1
BraA04t16421Z Brassica rapa HOM05D003839 ORTHO05D003352 6.1e-08 60.8 82 34.1
BcaC07g37358 Brassica carinata HOM05D003839 ORTHO05D003352 1.4e-07 59.7 60 40.0
BcaB04g17896 Brassica carinata HOM05D003839 ORTHO05D003352 1.8e-07 59.3 90 30.0
BcaB07g31055 Brassica carinata HOM05D003839 ORTHO05D003352 3.0e-07 58.5 64 42.2
BcaB06g27520 Brassica carinata HOM05D003839 ORTHO05D003352 4.0e-07 58.2 53 49.1
BcaC09g48414 Brassica carinata HOM05D003839 ORTHO05D003352 6.8e-07 57.4 62 33.9
C05p32830 Brassica napus HOM05D003839 ORTHO05D003352 8.9e-07 57.0 53 45.3
BolC9t57767H Brassica oleracea HOM05D003839 ORTHO05D003352 8.9e-07 57.0 91 33.0
BcaB05g21582 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-06 56.2 71 35.2
C02p27160 Brassica napus HOM05D003839 ORTHO05D003352 1.5e-06 56.2 91 31.9
C03p76730 Brassica napus HOM05D008292 ORTHO05D003352 1.5e-06 56.2 69 33.3
CSS0045033 Camellia sinensis var. sinensis HOM05D002915 ORTHO05D003004 1.5e-06 56.2 57 40.4
BcaB04g18557 Brassica carinata HOM05D003839 ORTHO05D003352 2.6e-06 55.5 71 35.2
BcaC07g37400 Brassica carinata HOM05D000313 ORTHO05D000065 2.6e-06 55.5 69 36.2
BcaNung06257 Brassica carinata HOM05D014297 ORTHO05D019911 2.6e-06 55.5 61 37.7
BolC8t47719H Brassica oleracea HOM05D000096 ORTHO05D000045 2.6e-06 55.5 69 36.2
BcaC09g47930 Brassica carinata HOM05D008292 ORTHO05D003352 4.4e-06 54.7 73 32.9
BcaC04g22104 Brassica carinata HOM05D003839 ORTHO05D003352 5.7e-06 54.3 91 30.8
C04p18360 Brassica napus HOM05D003839 ORTHO05D003352 5.7e-06 54.3 51 41.2
Ciclev10006753m.g Citrus clementina HOM05D002915 ORTHO05D003004 5.7e-06 54.3 58 36.2
C05p49230 Brassica napus HOM05D003839 ORTHO05D032372 7.5e-06 53.9 53 39.6
BcaC04g21847 Brassica carinata HOM05D009411 ORTHO05D014997 9.8e-06 53.5 71 32.4
A09p32650 Brassica napus HOM05D003839 ORTHO05D003352 9.8e-06 53.5 73 34.2
C09p26700 Brassica napus HOM05D009411 ORTHO05D014997 9.8e-06 53.5 71 32.4
BolC2t09048H Brassica oleracea HOM05D003839 ORTHO05D003352 9.8e-06 53.5 91 31.9
BolC9t55562H Brassica oleracea HOM05D009411 ORTHO05D014997 9.8e-06 53.5 71 32.4


User provided reference genes

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