Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g01394 Brassica carinata HOM05D004700 ORTHO05D005576 1.5e-172 609.4 306 100.0
BolC3t21472H Brassica oleracea HOM05D004700 ORTHO05D005576 8.5e-171 603.6 304 99.3
C03p91550 Brassica napus HOM05D004700 ORTHO05D005576 2.3e-168 595.5 304 98.4
AL1G62040 Arabidopsis lyrata HOM05D004700 ORTHO05D005576 3.8e-155 551.6 306 90.8
Sp1g40020 Schrenkiella parvula HOM05D004700 ORTHO05D005576 6.5e-155 550.8 306 91.2
Thhalv10011691m.g Eutrema salsugineum HOM05D004700 ORTHO05D005576 1.4e-154 549.7 306 90.5
Carub.0001s4267 Capsella rubella HOM05D004700 ORTHO05D005576 4.2e-154 548.1 306 90.5
AT1G53490 Arabidopsis thaliana HOM05D004700 ORTHO05D005576 2.1e-153 545.8 306 89.9
A05p18220 Brassica napus HOM05D004700 ORTHO05D005576 2.6e-148 528.9 304 87.5
BcaB07g33326 Brassica carinata HOM05D004700 ORTHO05D005576 1.9e-146 522.7 304 84.9
CARHR043720 Cardamine hirsuta HOM05D004700 ORTHO05D005576 3.6e-145 518.5 307 87.0
Aa31LG10G1720 Aethionema arabicum HOM05D004700 ORTHO05D005576 3.5e-140 501.9 304 83.9
BraA08t32208Z Brassica rapa HOM05D004700 ORTHO05D005576 4.5e-140 501.5 304 84.5
BraA08t32205Z Brassica rapa HOM05D004700 ORTHO05D005576 5.0e-139 498.0 304 84.5
THA.LOC104822577 Tarenaya hassleriana HOM05D004700 ORTHO05D005576 5.7e-135 484.6 310 80.0
BcaC08g43535 Brassica carinata HOM05D004700 ORTHO05D005576 9.8e-135 483.8 314 77.7
A06p00990 Brassica napus HOM05D004700 ORTHO05D005576 8.6e-131 470.7 351 69.8
BraA06t23327Z Brassica rapa HOM05D004700 ORTHO05D005576 8.6e-131 470.7 351 69.8
BcaB02g10917 Brassica carinata HOM05D004700 ORTHO05D005576 3.4e-127 458.8 306 77.5
Phvul.011G168700 Phaseolus vulgaris HOM05D004700 ORTHO05D005576 4.5e-124 448.4 310 73.5
TPR.G16482 Trifolium pratense HOM05D004700 ORTHO05D005576 4.3e-122 441.8 310 72.6
C06p09250 Brassica napus HOM05D004700 ORTHO05D005576 1.2e-121 440.3 345 67.8
BolC6t36002H Brassica oleracea HOM05D004700 ORTHO05D005576 1.2e-121 440.3 345 67.8
Lalb_Chr19g0133711 Lupinus albus HOM05D004700 ORTHO05D005576 8.9e-120 434.1 315 72.4
Medtr8g054400 Medicago truncatula HOM05D004700 ORTHO05D005576 1.2e-119 433.7 303 72.3
Gorai.007G331800 Gossypium raimondii HOM05D004700 ORTHO05D005576 9.8e-119 430.6 310 72.6
Gohir.D11G302900 Gossypium hirsutum HOM05D004700 ORTHO05D005576 2.0e-116 422.9 310 71.6
BcaB04g17077 Brassica carinata HOM05D004700 ORTHO05D005576 1.0e-115 420.6 293 75.8
Gohir.A11G289500 Gossypium hirsutum HOM05D004700 ORTHO05D005576 1.7e-115 419.9 310 71.0
Lj3g0009226 Lotus japonicus HOM05D004700 ORTHO05D005576 1.5e-114 416.8 308 69.8
CANSAT56G3173 Cannabis sativa HOM05D004700 ORTHO05D005576 1.2e-113 413.7 317 70.7
Glyma.15G209600 Glycine max HOM05D004700 ORTHO05D005576 3.6e-113 412.1 310 69.7
TWI38G0408 Tripterygium wilfordii HOM05D004700 ORTHO05D005576 3.6e-113 412.1 308 70.1
QL08p024163 Quercus lobata HOM05D004700 ORTHO05D005576 8.0e-113 411.0 308 68.8
Manes.15G098600 Manihot esculenta HOM05D004700 ORTHO05D005576 3.1e-112 409.1 310 69.0
ECA236G3615 Erigeron canadensis HOM05D004700 ORTHO05D005576 5.2e-112 408.3 343 66.2
Ciclev10016084m.g Citrus clementina HOM05D004700 ORTHO05D005576 2.4e-109 399.4 308 68.5
Potri.011G104500 Populus trichocarpa HOM05D004700 ORTHO05D005576 2.4e-109 399.4 310 68.1
Migut.H02024 Erythranthe guttata HOM05D004700 ORTHO05D005576 3.2e-109 399.1 312 67.6
Atru.chr2.1968 Acer truncatum HOM05D004700 ORTHO05D005576 5.4e-109 398.3 310 68.1
Sabra11G0081100 Salix brachista HOM05D004700 ORTHO05D005576 1.2e-108 397.1 308 67.9
Atru.chr2.1937 Acer truncatum HOM05D004700 ORTHO05D005576 1.6e-108 396.7 310 67.7
Haze_09248 Corylus avellana HOM05D004700 ORTHO05D005576 3.5e-108 395.6 308 68.5
Nn6g34422 Nelumbo nucifera HOM05D004700 ORTHO05D005576 6.0e-108 394.8 311 67.5
TWI38G0400 Tripterygium wilfordii HOM05D004700 ORTHO05D005576 6.0e-108 394.8 310 66.5
Prupe.4G156500 Prunus persica HOM05D004700 ORTHO05D005576 1.0e-107 394.0 311 67.5
Ca_22302_v3 Cicer arietinum L. HOM05D004700 ORTHO05D005576 1.1e-106 390.6 308 66.9
Oeu050672.1 Olea europaea HOM05D004700 ORTHO05D005576 1.9e-106 389.8 308 66.2
vmacro11972 Vaccinium macrocarpon HOM05D004700 ORTHO05D005576 1.2e-105 387.1 311 68.2
CiPaw.11G155900 Carya illinoinensis HOM05D004700 ORTHO05D005576 1.8e-104 383.3 310 66.8
Actinidia03618 Actinidia chinensis HOM05D004700 ORTHO05D005576 4.0e-104 382.1 313 67.4
MELO3C016116.2 Cucumis melo HOM05D004700 ORTHO05D005576 4.0e-104 382.1 309 66.3
Hma1.2p1_0050F.1_g028780 Hydrangea macrophylla HOM05D004700 ORTHO05D005576 2.0e-103 379.8 309 67.3
Actinidia12604 Actinidia chinensis HOM05D004700 ORTHO05D005576 5.8e-103 378.3 324 65.7
Hma1.2p1_0325F.1_g125830 Hydrangea macrophylla HOM05D004700 ORTHO05D005576 1.7e-102 376.7 315 65.7
Psat4g157000 Pisum sativum HOM05D004700 ORTHO05D005576 2.2e-102 376.3 306 64.1
CiPaw.12G110800 Carya illinoinensis HOM05D004700 ORTHO05D005576 2.9e-102 375.9 310 64.5
Glyma.09G099300 Glycine max HOM05D004700 ORTHO05D005576 8.3e-102 374.4 310 64.5
Cc05_g10710 Coffea canephora HOM05D004700 ORTHO05D005576 1.4e-101 373.6 311 66.9
Sed0011117 Sechium edule HOM05D004700 ORTHO05D005576 2.4e-101 372.9 311 64.6
CsaV3_4G008200 Cucumis sativus L. HOM05D004700 ORTHO05D005576 2.7e-100 369.4 311 65.9
Thecc.07G132900 Theobroma cacao HOM05D004700 ORTHO05D005576 6.0e-100 368.2 308 64.3
Eucgr.F03234 Eucalyptus grandis HOM05D004700 ORTHO05D005576 7.8e-100 367.9 308 64.3
CSS0040857 Camellia sinensis var. sinensis HOM05D004700 ORTHO05D005576 1.0e-99 367.5 308 65.9
Zm00001eb239370 Zea mays HOM05D004700 ORTHO05D005576 1.3e-99 367.1 312 63.8
GSVIVG01014096001 Vitis vinifera HOM05D004700 ORTHO05D005576 1.7e-99 366.7 309 64.4
Manes.03G079300 Manihot esculenta HOM05D004700 ORTHO05D005576 2.3e-99 366.3 310 64.5
MD03G1247600 Malus domestica HOM05D004700 ORTHO05D005576 3.0e-99 365.9 311 64.0
Actinidia39420 Actinidia chinensis HOM05D004700 ORTHO05D005576 5.1e-99 365.2 315 64.8
EL10Ac4g08417 Beta vulgaris HOM05D004700 ORTHO05D005576 8.6e-99 364.4 311 63.0
DCAR_013348 Daucus carota HOM05D004700 ORTHO05D005576 3.3e-98 362.5 311 64.0
Os02g0232100 Oryza sativa ssp. japonica HOM05D004700 ORTHO05D005576 3.3e-98 362.5 310 62.9
Hund08843 Selenicereus undatus HOM05D004700 ORTHO05D005576 6.2e-97 358.2 311 63.0
CAN.G68.2 Capsicum annuum HOM05D004700 ORTHO05D005576 2.4e-96 356.3 309 62.1
unitig_746.g26835 Utricularia gibba HOM05D004700 ORTHO05D005576 3.1e-96 355.9 339 58.1
Duzib213G0278 Durio zibethinus HOM05D004700 ORTHO05D005576 4.0e-96 355.5 308 63.0
PGR031G0266 Punica granatum HOM05D004700 ORTHO05D005576 4.0e-96 355.5 307 63.5
Potri.001G383900 Populus trichocarpa HOM05D004700 ORTHO05D005576 6.8e-96 354.8 316 62.3
BcaC08g44093 Brassica carinata HOM05D004700 ORTHO05D005576 2.6e-95 352.8 238 79.8
HanXRQChr15g0492381 Helianthus annuus HOM05D004700 ORTHO05D005576 1.3e-94 350.5 319 61.8
Rhsim06G0211800 Rhododendron simsii HOM05D004700 ORTHO05D005576 2.2e-94 349.7 313 63.9
PSO541G3766 Papaver somniferum HOM05D004700 ORTHO05D005576 2.9e-94 349.4 311 60.8
Lj1A824T63 Lonicera japonica HOM05D004700 ORTHO05D005576 6.4e-94 348.2 287 66.6
SGA_v2.0_scaffold181G39765 Striga asiatica HOM05D004700 ORTHO05D005576 1.1e-93 347.4 314 61.1
VMungo1127G0687 Vigna mungo HOM05D004700 ORTHO05D005576 3.2e-93 345.9 261 69.3
Sopen08g005940 Solanum pennellii HOM05D004700 ORTHO05D005576 2.7e-92 342.8 311 61.1
C06p14980 Brassica napus HOM05D004700 ORTHO05D005576 1.7e-91 340.1 230 80.0
BolC6t36675H Brassica oleracea HOM05D004700 ORTHO05D005576 1.7e-91 340.1 230 80.0
PSO675G6346 Papaver somniferum HOM05D004700 ORTHO05D005576 2.3e-91 339.7 313 59.1
ATR0602G050 Amborella trichopoda HOM05D004700 ORTHO05D005576 3.0e-91 339.3 320 58.8
Nitab4.5_0000092g0360 Nicotiana tabacum HOM05D004700 ORTHO05D005576 4.7e-89 332.0 265 69.8
Nitab4.5_0000348g0050 Nicotiana tabacum HOM05D004700 ORTHO05D005576 1.8e-88 330.1 309 59.9
MBI06_g08516_MAGBIO Magnolia biondii HOM05D004700 ORTHO05D005576 4.4e-87 325.5 324 56.8
Sabra16G0252900 Salix brachista HOM05D004700 ORTHO05D005576 4.4e-87 325.5 341 55.1
arahy.Tifrunner.gnm1.ann1.7PP38G Arachis hypogaea HOM05D004700 ORTHO05D005576 1.7e-86 323.6 266 65.8
FAN11G3801 Fragaria x ananassa HOM05D004700 ORTHO05D005576 6.4e-86 321.6 323 58.2
arahy.Tifrunner.gnm1.ann1.DP9AR5 Arachis hypogaea HOM05D004700 ORTHO05D005576 2.4e-85 319.7 275 63.3
FAN16G2451 Fragaria x ananassa HOM05D004700 ORTHO05D005576 4.2e-85 318.9 322 57.8
ClCG07G010130 Citrullus lanatus HOM05D004700 ORTHO05D005576 4.6e-84 315.5 275 65.1
Dinv26707 Davidia involucrata HOM05D004700 ORTHO05D005576 6.0e-84 315.1 311 58.8
MD11G1269900 Malus domestica HOM05D004700 ORTHO05D005576 7.8e-84 314.7 327 56.9
Cpa.g.sc77.62 Carica papaya HOM05D004700 ORTHO05D005576 1.0e-83 314.3 234 70.9
Solyc08g015770.4 Solanum lycopersicum HOM05D004700 ORTHO05D005576 5.1e-83 312.0 292 61.3
Sc03g0010710 Simmondsia chinensis HOM05D004700 ORTHO05D005576 3.3e-82 309.3 285 61.1
RcHm_v2.0_Chr5g0029521 Rosa chinensis HOM05D004700 ORTHO05D005576 4.3e-82 308.9 310 58.1
Peaxi162Scf00111g01325 Petunia axillaris HOM05D004700 ORTHO05D005576 4.0e-80 302.4 252 68.7
TAR624G0400 Trochodendron aralioides HOM05D004700 ORTHO05D005576 1.2e-79 300.8 285 61.1
Sabra11G0076400 Salix brachista HOM05D004700 ORTHO05D005576 2.0e-79 300.1 265 62.6
FvH4_3g17740 Fragaria vesca HOM05D004700 ORTHO05D005576 7.6e-79 298.1 310 56.8
Aqoxy1G01902 Aquilegia oxysepala HOM05D004700 ORTHO05D005576 4.9e-78 295.4 218 68.8
Lsat_1_v5_gn_7_101801 Lactuca sativa HOM05D004700 ORTHO05D005576 1.4e-77 293.9 294 60.5
RhsimUnG0206700 Rhododendron simsii HOM05D004700 ORTHO05D005576 2.4e-77 293.1 315 56.5
Sed0005766 Sechium edule HOM05D004700 ORTHO05D005576 1.0e-75 287.7 219 67.6
Nitab4.5_0012258g0020 Nicotiana tabacum HOM05D004700 ORTHO05D005576 1.6e-73 280.4 287 57.5
Cfa019516 Carpinus fangiana HOM05D004700 ORTHO05D005576 1.2e-71 274.2 245 63.3
MSTRG.12860 Avicennia marina HOM05D004700 ORTHO05D005576 1.5e-71 273.9 240 66.2
CSS0048020 Camellia sinensis var. sinensis HOM05D004700 ORTHO05D005576 2.0e-71 273.5 260 61.2
BraA05t20718Z Brassica rapa HOM05D004700 ORTHO05D005576 5.8e-71 271.9 147 91.8
CSS0037390 Camellia sinensis var. sinensis HOM05D004700 ORTHO05D005576 7.6e-71 271.6 260 60.8
COL.COLO4_17473 Corchorus olitorius HOM05D004700 ORTHO05D005576 7.6e-71 271.6 235 63.8
Sabra11G0075900 Salix brachista HOM05D004700 ORTHO05D005576 3.7e-65 252.7 215 63.3
Dinv13363 Davidia involucrata HOM05D004700 ORTHO05D005576 1.5e-63 247.3 189 68.3
AUR62039578 Chenopodium quinoa HOM05D004700 ORTHO05D005576 7.1e-61 238.4 237 58.6
AUR62019650 Chenopodium quinoa HOM05D004700 ORTHO05D005576 6.1e-60 235.3 237 58.6
PGSC0003DMG400013718 Solanum tuberosum HOM05D004700 ORTHO05D005576 1.8e-56 223.8 237 56.5
DCAR_021040 Daucus carota HOM05D004700 ORTHO05D005576 9.4e-53 211.5 241 54.4
Ah.04g164030 Amaranthus hybridus HOM05D004700 ORTHO05D005576 4.6e-52 209.1 235 55.3
CDE06G2539 Ceratophyllum demersum HOM05D004700 ORTHO05D005576 4.6e-52 209.1 247 51.0
Oeu010032.1 Olea europaea HOM05D004700 ORTHO05D005576 7.9e-52 208.4 303 44.9
Peaxi162Scf00000g00759 Petunia axillaris HOM05D004700 ORTHO05D005576 7.9e-52 208.4 233 54.5
Sabra11G0076300 Salix brachista HOM05D004700 ORTHO05D005576 1.4e-51 207.6 174 64.4
Ah.06g187700 Amaranthus hybridus HOM05D004700 ORTHO05D005576 3.3e-50 203.0 240 53.8
Pp3c8_15890 Physcomitrium patens HOM05D004700 ORTHO05D005576 2.2e-49 200.3 327 39.4
Sabra11G0075300 Salix brachista HOM05D004700 ORTHO05D005576 6.9e-48 195.3 161 64.6
Gorai.002G047100 Gossypium raimondii HOM05D004700 ORTHO05D005576 1.5e-47 194.1 244 48.0
SEGI_00597 Sequoiadendron giganteum HOM05D004700 ORTHO05D005576 5.9e-47 192.2 244 47.5
Mapoly0001s0250 Marchantia polymorpha HOM05D004700 ORTHO05D005576 1.2e-44 184.5 326 38.0
AagrBONN_evm.TU.Sc2ySwM_362.885 Anthoceros agrestis HOM05D004700 ORTHO05D005576 1.1e-42 177.9 302 38.7
Sc07g0002390 Simmondsia chinensis HOM05D004700 ORTHO05D005576 1.5e-42 177.6 143 65.0
Sabra11G0075500 Salix brachista HOM05D004700 ORTHO05D005576 1.3e-38 164.5 150 61.3
FAN25G1946 Fragaria x ananassa HOM05D004700 ORTHO05D005576 5.5e-37 159.1 249 45.8
CDE02G3773 Ceratophyllum demersum HOM05D004700 ORTHO05D005576 7.2e-37 158.7 291 40.2
Actinidia04619 Actinidia chinensis HOM05D004700 ORTHO05D005576 8.8e-35 151.8 74 90.5
Actinidia04620 Actinidia chinensis HOM05D004700 ORTHO05D005576 2.4e-32 143.7 170 54.7
Gohir.D01G038350 Gossypium hirsutum HOM05D004700 ORTHO05D005576 1.0e-30 138.3 157 51.6
Zm00001eb164550 Zea mays HOM05D004700 ORTHO05D005576 1.9e-29 134.0 73 76.7
Ah.06g187690 Amaranthus hybridus HOM05D004700 ORTHO05D000031 8.0e-28 128.6 73 78.1
Zm00001eb337320 Zea mays HOM05D004700 ORTHO05D005576 9.8e-26 121.7 168 44.0
Zm00001eb364990 Zea mays HOM05D001185 ORTHO05D005576 1.4e-24 117.9 126 57.9
Cre03.g161500 Chlamydomonas reinhardtii HOM05D004700 ORTHO05D005576 2.7e-23 113.6 179 33.5
Zm00001eb046150 Zea mays HOM05D004700 ORTHO05D005576 8.5e-22 108.6 59 74.6
Aqoxy1G01901 Aquilegia oxysepala HOM05D004700 ORTHO05D005576 2.8e-17 93.6 95 55.8
Zm00001eb352830 Zea mays HOM05D004700 ORTHO05D005576 2.8e-17 93.6 50 74.0
Lsat_1_v5_gn_6_80301 Lactuca sativa HOM05D003665 ORTHO05D004387 8.0e-12 75.5 53 73.6
Lsat_1_v5_gn_8_31621 Lactuca sativa HOM05D003665 ORTHO05D004387 1.0e-11 75.1 52 75.0
Nitab4.5_0000244g0440 Nicotiana tabacum HOM05D000856 ORTHO05D001792 1.4e-08 64.7 94 47.9
Peaxi162Scf00000g00758 Petunia axillaris HOM05D004700 ORTHO05D005576 9.2e-08 62.0 100 38.0
Sc07g0002380 Simmondsia chinensis HOM05D004700 ORTHO05D005576 2.0e-07 60.8 83 45.8
MCO09G350 Micromonas commoda HOM05D004700 ORTHO05D005576 3.9e-06 56.6 119 29.4


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